RNA–Protein interactions for RNA: ENST00000527028.5

PDZD3-206, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-206ENST00000527028 NISCHQ9Y2I1 1504 aa37.33■■■■□ 3.57
PDZD3-206ENST00000527028 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
PDZD3-206ENST00000527028 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
PDZD3-206ENST00000527028 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
PDZD3-206ENST00000527028 SUPT5HO00267 1087 aaKnown RBP31.46■■■□□ 2.63
PDZD3-206ENST00000527028 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
PDZD3-206ENST00000527028 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
PDZD3-206ENST00000527028 HRCP23327 699 aa30.91■■■□□ 2.54
PDZD3-206ENST00000527028 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
PDZD3-206ENST00000527028 PCGF6Q9BYE7 350 aa30.41■■■□□ 2.46
PDZD3-206ENST00000527028 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
PDZD3-206ENST00000527028 ABCC9O60706 1549 aa30.05■■■□□ 2.4
PDZD3-206ENST00000527028 PPARGC1BQ86YN6 1023 aaKnown RBP29.95■■■□□ 2.39
PDZD3-206ENST00000527028 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
PDZD3-206ENST00000527028 TRIM26Q12899 539 aaPredicted RBP29.89■■■□□ 2.38
PDZD3-206ENST00000527028 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
PDZD3-206ENST00000527028 ZEB1P37275 1124 aaPredicted RBP29.56■■■□□ 2.32
PDZD3-206ENST00000527028 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
PDZD3-206ENST00000527028 SCRIBQ14160 1630 aa29.52■■■□□ 2.32
PDZD3-206ENST00000527028 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
PDZD3-206ENST00000527028 NACADO15069 1562 aa29.1■■■□□ 2.25
PDZD3-206ENST00000527028 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
PDZD3-206ENST00000527028 PELP1Q8IZL8 1130 aaKnown RBP28.97■■■□□ 2.23
PDZD3-206ENST00000527028 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
PDZD3-206ENST00000527028 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.23
PDZD3-206ENST00000527028 WIZO95785 1651 aa28.85■■■□□ 2.21
PDZD3-206ENST00000527028 BAZ1AQ9NRL2 1556 aaPredicted RBP28.85■■■□□ 2.21
PDZD3-206ENST00000527028 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
PDZD3-206ENST00000527028 SCAF1Q9H7N4 1312 aaKnown RBP28.7■■■□□ 2.18
PDZD3-206ENST00000527028 EHMT2Q96KQ7 1210 aa28.59■■■□□ 2.17
PDZD3-206ENST00000527028 WRNQ14191 1432 aaPredicted RBP eCLIP28.56■■■□□ 2.16
PDZD3-206ENST00000527028 TOP2AP11388 1531 aaKnown RBP28.51■■■□□ 2.15
PDZD3-206ENST00000527028 CCER1Q8TC90 406 aaPredicted RBP28.44■■■□□ 2.14
PDZD3-206ENST00000527028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.42■■■□□ 2.14
PDZD3-206ENST00000527028 SMARCA4P51532 1647 aa28.35■■■□□ 2.13
PDZD3-206ENST00000527028 ACIN1Q9UKV3 1341 aaKnown RBP28.35■■■□□ 2.13
PDZD3-206ENST00000527028 SMARCA2P51531 1590 aa28.33■■■□□ 2.13
PDZD3-206ENST00000527028 ABCC8Q09428 1581 aa28.32■■■□□ 2.12
PDZD3-206ENST00000527028 CCDC88BA6NC98 1476 aa28.32■■■□□ 2.12
PDZD3-206ENST00000527028 EEA1Q15075 1411 aa28.31■■■□□ 2.12
PDZD3-206ENST00000527028 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
PDZD3-206ENST00000527028 TNIKQ9UKE5 1360 aa28.29■■■□□ 2.12
PDZD3-206ENST00000527028 DIEXFQ68CQ4 756 aaKnown RBP28.21■■■□□ 2.11
PDZD3-206ENST00000527028 NEUROD1Q13562 356 aa28.17■■■□□ 2.1
PDZD3-206ENST00000527028 CENPBP07199 599 aaPredicted RBP28.16■■■□□ 2.1
PDZD3-206ENST00000527028 SOGA1O94964 1423 aa28.13■■■□□ 2.09
PDZD3-206ENST00000527028 UNC13AQ9UPW8 1703 aa28.08■■■□□ 2.09
PDZD3-206ENST00000527028 GOLGA3Q08378 1498 aa28.05■■■□□ 2.08
PDZD3-206ENST00000527028 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
PDZD3-206ENST00000527028 GTF3C3Q9Y5Q9 886 aa27.94■■■□□ 2.06
PDZD3-206ENST00000527028 RUSC2Q8N2Y8 1516 aa27.94■■■□□ 2.06
PDZD3-206ENST00000527028 ZNF316A6NFI3 1004 aaPredicted RBP27.91■■■□□ 2.06
PDZD3-206ENST00000527028 KIF21BO75037 1637 aa27.9■■■□□ 2.06
PDZD3-206ENST00000527028 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.05
PDZD3-206ENST00000527028 UBTFP17480 764 aaKnown RBP27.88■■■□□ 2.05
PDZD3-206ENST00000527028 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
PDZD3-206ENST00000527028 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
PDZD3-206ENST00000527028 BAZ1BQ9UIG0 1483 aaKnown RBP27.73■■■□□ 2.03
PDZD3-206ENST00000527028 MYT1Q01538 1121 aa27.73■■■□□ 2.03
PDZD3-206ENST00000527028 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
PDZD3-206ENST00000527028 VPS8Q8N3P4 1428 aa27.69■■■□□ 2.02
PDZD3-206ENST00000527028 CLIP1P30622 1438 aa27.68■■■□□ 2.02
PDZD3-206ENST00000527028 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
PDZD3-206ENST00000527028 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
PDZD3-206ENST00000527028 HNRNPUL2Q1KMD3 747 aaKnown RBP27.5■■□□□ 1.99
PDZD3-206ENST00000527028 MIER1Q8N108 512 aa27.48■■□□□ 1.99
PDZD3-206ENST00000527028 RAPGEF2Q9Y4G8 1499 aa27.47■■□□□ 1.99
PDZD3-206ENST00000527028 CLSPNQ9HAW4 1339 aa27.46■■□□□ 1.99
PDZD3-206ENST00000527028 ATAD2BQ9ULI0 1458 aa27.45■■□□□ 1.98
PDZD3-206ENST00000527028 APLP2Q06481 763 aa27.44■■□□□ 1.98
PDZD3-206ENST00000527028 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
PDZD3-206ENST00000527028 YTHDC1Q96MU7 727 aaKnown RBP27.39■■□□□ 1.98
PDZD3-206ENST00000527028 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
PDZD3-206ENST00000527028 BIVM-ERCC5R4GMW8 1640 aa27.35■■□□□ 1.97
PDZD3-206ENST00000527028 PRXQ9BXM0 1461 aa27.25■■□□□ 1.95
PDZD3-206ENST00000527028 DHX57Q6P158 1386 aaKnown RBP27.24■■□□□ 1.95
PDZD3-206ENST00000527028 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
PDZD3-206ENST00000527028 RRBP1Q9P2E9 1410 aaKnown RBP27.15■■□□□ 1.94
PDZD3-206ENST00000527028 CUX2O14529 1486 aa27.15■■□□□ 1.94
PDZD3-206ENST00000527028 RANGAP1P46060 587 aaPredicted RBP26.99■■□□□ 1.91
PDZD3-206ENST00000527028 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
PDZD3-206ENST00000527028 KIF27Q86VH2 1401 aa26.98■■□□□ 1.91
PDZD3-206ENST00000527028 KANK4Q5T7N3 995 aaPredicted RBP26.97■■□□□ 1.91
PDZD3-206ENST00000527028 CUX1P39880 1505 aa26.96■■□□□ 1.91
PDZD3-206ENST00000527028 CCNB3Q8WWL7 1395 aa26.93■■□□□ 1.9
PDZD3-206ENST00000527028 ARHGAP35Q9NRY4 1499 aa26.89■■□□□ 1.89
PDZD3-206ENST00000527028 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
PDZD3-206ENST00000527028 SUPT16HQ9Y5B9 1047 aaKnown RBP26.87■■□□□ 1.89
PDZD3-206ENST00000527028 MAP3K1Q13233 1512 aa26.86■■□□□ 1.89
PDZD3-206ENST00000527028 CFTRP13569 1480 aa26.79■■□□□ 1.88
PDZD3-206ENST00000527028 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
PDZD3-206ENST00000527028 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
PDZD3-206ENST00000527028 TIAM1Q13009 1591 aa26.75■■□□□ 1.87
PDZD3-206ENST00000527028 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
PDZD3-206ENST00000527028 SETD5Q9C0A6 1442 aa26.63■■□□□ 1.85
PDZD3-206ENST00000527028 LRRC9Q6ZRR7 1453 aa26.61■■□□□ 1.85
PDZD3-206ENST00000527028 CFAP43Q8NDM7 1665 aa26.59■■□□□ 1.85
PDZD3-206ENST00000527028 IGF1RP08069 1367 aa26.58■■□□□ 1.85
PDZD3-206ENST00000527028 TIMELESSQ9UNS1 1208 aa26.55■■□□□ 1.84
PDZD3-206ENST00000527028 TSHZ2Q9NRE2 1034 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms