RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
LTBP3-204ENST00000525443 EIF5BO60841 1220 aaKnown RBP20.98■□□□□ 0.95
LTBP3-204ENST00000525443 CLIP1P30622 1438 aa20.97■□□□□ 0.95
LTBP3-204ENST00000525443 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
LTBP3-204ENST00000525443 KIF21BO75037 1637 aa20.95■□□□□ 0.94
LTBP3-204ENST00000525443 HNRNPUL2Q1KMD3 747 aaKnown RBP20.94■□□□□ 0.94
LTBP3-204ENST00000525443 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
LTBP3-204ENST00000525443 NESP48681 1621 aa20.89■□□□□ 0.93
LTBP3-204ENST00000525443 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.93
LTBP3-204ENST00000525443 CUX2O14529 1486 aa20.86■□□□□ 0.93
LTBP3-204ENST00000525443 PKNOX2Q96KN3 472 aa20.85■□□□□ 0.93
LTBP3-204ENST00000525443 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
LTBP3-204ENST00000525443 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
LTBP3-204ENST00000525443 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
LTBP3-204ENST00000525443 IGF1RP08069 1367 aa20.77■□□□□ 0.92
LTBP3-204ENST00000525443 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
LTBP3-204ENST00000525443 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
LTBP3-204ENST00000525443 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
LTBP3-204ENST00000525443 PLEKHG5O94827 1062 aa20.73■□□□□ 0.91
LTBP3-204ENST00000525443 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
LTBP3-204ENST00000525443 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
LTBP3-204ENST00000525443 TRIM52Q96A61 297 aa20.71■□□□□ 0.91
LTBP3-204ENST00000525443 CARMIL1Q5VZK9 1371 aa20.71■□□□□ 0.91
LTBP3-204ENST00000525443 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
LTBP3-204ENST00000525443 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
LTBP3-204ENST00000525443 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
LTBP3-204ENST00000525443 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
LTBP3-204ENST00000525443 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
LTBP3-204ENST00000525443 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
LTBP3-204ENST00000525443 SLC24A1O60721 1099 aa20.63■□□□□ 0.89
LTBP3-204ENST00000525443 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
LTBP3-204ENST00000525443 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
LTBP3-204ENST00000525443 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
LTBP3-204ENST00000525443 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
LTBP3-204ENST00000525443 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
LTBP3-204ENST00000525443 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
LTBP3-204ENST00000525443 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
LTBP3-204ENST00000525443 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
LTBP3-204ENST00000525443 ARHGAP35Q9NRY4 1499 aa20.52■□□□□ 0.88
LTBP3-204ENST00000525443 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.88
LTBP3-204ENST00000525443 PODXL2Q9NZ53 605 aa20.52■□□□□ 0.87
LTBP3-204ENST00000525443 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
LTBP3-204ENST00000525443 DDX10Q13206 875 aaKnown RBP20.48■□□□□ 0.87
LTBP3-204ENST00000525443 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
LTBP3-204ENST00000525443 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
LTBP3-204ENST00000525443 GAPVD1Q14C86 1478 aa20.38■□□□□ 0.85
LTBP3-204ENST00000525443 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
LTBP3-204ENST00000525443 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
LTBP3-204ENST00000525443 ZBTB47Q9UFB7 747 aaPredicted RBP20.35■□□□□ 0.85
LTBP3-204ENST00000525443 WASHC2AQ641Q2 1341 aa20.34■□□□□ 0.85
LTBP3-204ENST00000525443 IPO9Q96P70 1041 aaKnown RBP20.34■□□□□ 0.85
LTBP3-204ENST00000525443 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
LTBP3-204ENST00000525443 ZMYND15Q9H091 742 aa20.33■□□□□ 0.85
LTBP3-204ENST00000525443 C11orf95C9JLR9 678 aaPredicted RBP20.32■□□□□ 0.84
LTBP3-204ENST00000525443 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
LTBP3-204ENST00000525443 DAXXQ9UER7 740 aaPredicted RBP20.31■□□□□ 0.84
LTBP3-204ENST00000525443 ANP32AP39687 249 aaKnown RBP20.3■□□□□ 0.84
LTBP3-204ENST00000525443 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
LTBP3-204ENST00000525443 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.846e-6■■■■□ 25.1
LTBP3-204ENST00000525443 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
LTBP3-204ENST00000525443 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.83
LTBP3-204ENST00000525443 NEFMP07197 916 aa20.26■□□□□ 0.83
LTBP3-204ENST00000525443 CUL7Q14999 1698 aa20.26■□□□□ 0.83
LTBP3-204ENST00000525443 WASHC2CQ9Y4E1 1318 aa20.25■□□□□ 0.83
LTBP3-204ENST00000525443 CCER2I3L3R5 266 aa20.25■□□□□ 0.83
LTBP3-204ENST00000525443 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
LTBP3-204ENST00000525443 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
LTBP3-204ENST00000525443 ERCC6Q03468 1493 aa20.23■□□□□ 0.83
LTBP3-204ENST00000525443 ANP32CO43423 234 aa20.22■□□□□ 0.83
LTBP3-204ENST00000525443 GLIPR1L2Q4G1C9 344 aa20.22■□□□□ 0.83
LTBP3-204ENST00000525443 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
LTBP3-204ENST00000525443 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
LTBP3-204ENST00000525443 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
LTBP3-204ENST00000525443 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
LTBP3-204ENST00000525443 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
LTBP3-204ENST00000525443 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
LTBP3-204ENST00000525443 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
LTBP3-204ENST00000525443 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
LTBP3-204ENST00000525443 RRBP1Q9P2E9 1410 aaKnown RBP20.16■□□□□ 0.82
LTBP3-204ENST00000525443 TIAM1Q13009 1591 aa20.16■□□□□ 0.82
LTBP3-204ENST00000525443 LRRC9Q6ZRR7 1453 aa20.14■□□□□ 0.82
LTBP3-204ENST00000525443 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-204ENST00000525443 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
LTBP3-204ENST00000525443 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
LTBP3-204ENST00000525443 PCF11O94913 1555 aaKnown RBP20.12■□□□□ 0.81
LTBP3-204ENST00000525443 FBLN2P98095 1184 aa20.11■□□□□ 0.81
LTBP3-204ENST00000525443 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
LTBP3-204ENST00000525443 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
LTBP3-204ENST00000525443 CASKIN1Q8WXD9 1431 aa20.1■□□□□ 0.81
LTBP3-204ENST00000525443 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
LTBP3-204ENST00000525443 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
LTBP3-204ENST00000525443 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
LTBP3-204ENST00000525443 IFT140Q96RY7 1462 aa20.08■□□□□ 0.81
LTBP3-204ENST00000525443 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.81
LTBP3-204ENST00000525443 MAP3K1Q13233 1512 aa20.08■□□□□ 0.81
LTBP3-204ENST00000525443 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
LTBP3-204ENST00000525443 FYCO1Q9BQS8 1478 aa20.06■□□□□ 0.8
LTBP3-204ENST00000525443 GSE1Q14687 1217 aa20.05■□□□□ 0.8
LTBP3-204ENST00000525443 SIN3AQ96ST3 1273 aa20.04■□□□□ 0.8
LTBP3-204ENST00000525443 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms