RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
LTBP3-204ENST00000525443 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
LTBP3-204ENST00000525443 HRCP23327 699 aa25.26■■□□□ 1.63
LTBP3-204ENST00000525443 PPARGC1BQ86YN6 1023 aaKnown RBP24.88■■□□□ 1.57
LTBP3-204ENST00000525443 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.56
LTBP3-204ENST00000525443 MYT1Q01538 1121 aa24.76■■□□□ 1.55
LTBP3-204ENST00000525443 SHROOM4Q9ULL8 1493 aa24.66■■□□□ 1.54
LTBP3-204ENST00000525443 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
LTBP3-204ENST00000525443 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
LTBP3-204ENST00000525443 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
LTBP3-204ENST00000525443 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
LTBP3-204ENST00000525443 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
LTBP3-204ENST00000525443 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
LTBP3-204ENST00000525443 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
LTBP3-204ENST00000525443 ABCC9O60706 1549 aa23.67■■□□□ 1.38
LTBP3-204ENST00000525443 ACIN1Q9UKV3 1341 aaKnown RBP23.53■■□□□ 1.36
LTBP3-204ENST00000525443 NEUROD1Q13562 356 aa23.49■■□□□ 1.35
LTBP3-204ENST00000525443 GTF3C3Q9Y5Q9 886 aa23.46■■□□□ 1.35
LTBP3-204ENST00000525443 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
LTBP3-204ENST00000525443 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
LTBP3-204ENST00000525443 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
LTBP3-204ENST00000525443 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-204ENST00000525443 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
LTBP3-204ENST00000525443 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
LTBP3-204ENST00000525443 NACADO15069 1562 aa23.18■■□□□ 1.3
LTBP3-204ENST00000525443 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.3
LTBP3-204ENST00000525443 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
LTBP3-204ENST00000525443 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
LTBP3-204ENST00000525443 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
LTBP3-204ENST00000525443 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
LTBP3-204ENST00000525443 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
LTBP3-204ENST00000525443 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
LTBP3-204ENST00000525443 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
LTBP3-204ENST00000525443 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
LTBP3-204ENST00000525443 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
LTBP3-204ENST00000525443 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
LTBP3-204ENST00000525443 YTHDC1Q96MU7 727 aaKnown RBP22.55■■□□□ 1.2
LTBP3-204ENST00000525443 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
LTBP3-204ENST00000525443 WIZO95785 1651 aa22.41■■□□□ 1.18
LTBP3-204ENST00000525443 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
LTBP3-204ENST00000525443 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
LTBP3-204ENST00000525443 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
LTBP3-204ENST00000525443 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
LTBP3-204ENST00000525443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
LTBP3-204ENST00000525443 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-204ENST00000525443 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
LTBP3-204ENST00000525443 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
LTBP3-204ENST00000525443 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
LTBP3-204ENST00000525443 APLP2Q06481 763 aa22.16■■□□□ 1.14
LTBP3-204ENST00000525443 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
LTBP3-204ENST00000525443 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
LTBP3-204ENST00000525443 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
LTBP3-204ENST00000525443 MIER1Q8N108 512 aa22.04■■□□□ 1.12
LTBP3-204ENST00000525443 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
LTBP3-204ENST00000525443 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
LTBP3-204ENST00000525443 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
LTBP3-204ENST00000525443 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
LTBP3-204ENST00000525443 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
LTBP3-204ENST00000525443 ABCC8Q09428 1581 aa21.79■■□□□ 1.08
LTBP3-204ENST00000525443 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
LTBP3-204ENST00000525443 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
LTBP3-204ENST00000525443 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
LTBP3-204ENST00000525443 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
LTBP3-204ENST00000525443 BCANQ96GW7 911 aa21.61■■□□□ 1.05
LTBP3-204ENST00000525443 RBM19Q9Y4C8 960 aaKnown RBP21.6■■□□□ 1.05
LTBP3-204ENST00000525443 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
LTBP3-204ENST00000525443 SOGA1O94964 1423 aa21.55■■□□□ 1.04
LTBP3-204ENST00000525443 MSH5O43196 834 aa21.54■■□□□ 1.04
LTBP3-204ENST00000525443 NCAPD3P42695 1498 aa21.5■■□□□ 1.03
LTBP3-204ENST00000525443 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
LTBP3-204ENST00000525443 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
LTBP3-204ENST00000525443 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
LTBP3-204ENST00000525443 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
LTBP3-204ENST00000525443 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
LTBP3-204ENST00000525443 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
LTBP3-204ENST00000525443 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
LTBP3-204ENST00000525443 EEA1Q15075 1411 aa21.34■■□□□ 1.01
LTBP3-204ENST00000525443 FKBP8Q14318 412 aa21.32■■□□□ 1
LTBP3-204ENST00000525443 UBE2Q2Q8WVN8 375 aa21.31■■□□□ 1
LTBP3-204ENST00000525443 ITGAEP38570 1179 aa21.26■□□□□ 0.99
LTBP3-204ENST00000525443 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
LTBP3-204ENST00000525443 TNIKQ9UKE5 1360 aa21.22■□□□□ 0.99
LTBP3-204ENST00000525443 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
LTBP3-204ENST00000525443 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.19■□□□□ 0.98
LTBP3-204ENST00000525443 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
LTBP3-204ENST00000525443 CFTRP13569 1480 aa21.19■□□□□ 0.98
LTBP3-204ENST00000525443 MYT1LQ9UL68 1186 aa21.18■□□□□ 0.98
LTBP3-204ENST00000525443 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
LTBP3-204ENST00000525443 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
LTBP3-204ENST00000525443 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
LTBP3-204ENST00000525443 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
LTBP3-204ENST00000525443 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
LTBP3-204ENST00000525443 ERICH6BQ5W0A0 696 aa21.1■□□□□ 0.97
LTBP3-204ENST00000525443 KCNH8Q96L42 1107 aa21.08■□□□□ 0.97
LTBP3-204ENST00000525443 RTN4Q9NQC3 1192 aaKnown RBP21.07■□□□□ 0.96
LTBP3-204ENST00000525443 CUX1P39880 1505 aa21.06■□□□□ 0.96
LTBP3-204ENST00000525443 RAPGEF2Q9Y4G8 1499 aa21.03■□□□□ 0.96
LTBP3-204ENST00000525443 NEFLP07196 543 aa21.02■□□□□ 0.96
LTBP3-204ENST00000525443 IL27Q8NEV9 243 aa21.02■□□□□ 0.96
LTBP3-204ENST00000525443 NBR1Q14596 966 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms