RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
DEPDC1-205ENST00000525124 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
DEPDC1-205ENST00000525124 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
DEPDC1-205ENST00000525124 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
DEPDC1-205ENST00000525124 EIF4G3O43432 1585 aaKnown RBP15.55■□□□□ 0.08
DEPDC1-205ENST00000525124 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
DEPDC1-205ENST00000525124 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
DEPDC1-205ENST00000525124 PIP4P2Q8N4L2 257 aa15.54■□□□□ 0.08
DEPDC1-205ENST00000525124 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
DEPDC1-205ENST00000525124 RIMBP3CA6NJZ7 1639 aa15.52■□□□□ 0.08
DEPDC1-205ENST00000525124 RIMBP3BA6NNM3 1639 aa15.52■□□□□ 0.08
DEPDC1-205ENST00000525124 RIMBP3Q9UFD9 1639 aa15.52■□□□□ 0.08
DEPDC1-205ENST00000525124 CHD1O14646 1710 aa15.49■□□□□ 0.07
DEPDC1-205ENST00000525124 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
DEPDC1-205ENST00000525124 FBLN2P98095 1184 aa15.45■□□□□ 0.06
DEPDC1-205ENST00000525124 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
DEPDC1-205ENST00000525124 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.06
DEPDC1-205ENST00000525124 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
DEPDC1-205ENST00000525124 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
DEPDC1-205ENST00000525124 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
DEPDC1-205ENST00000525124 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
DEPDC1-205ENST00000525124 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
DEPDC1-205ENST00000525124 SP7Q8TDD2 431 aaPredicted RBP15.4■□□□□ 0.06
DEPDC1-205ENST00000525124 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.05
DEPDC1-205ENST00000525124 SOGA1O94964 1423 aa15.34■□□□□ 0.05
DEPDC1-205ENST00000525124 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.04
DEPDC1-205ENST00000525124 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
DEPDC1-205ENST00000525124 CUX1P39880 1505 aa15.33■□□□□ 0.04
DEPDC1-205ENST00000525124 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
DEPDC1-205ENST00000525124 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
DEPDC1-205ENST00000525124 HAX1O00165 279 aa15.28■□□□□ 0.04
DEPDC1-205ENST00000525124 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.04
DEPDC1-205ENST00000525124 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
DEPDC1-205ENST00000525124 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
DEPDC1-205ENST00000525124 ARAP1Q96P48 1450 aa15.26■□□□□ 0.03
DEPDC1-205ENST00000525124 TDRD9Q8NDG6 1382 aaKnown RBP15.25■□□□□ 0.03
DEPDC1-205ENST00000525124 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
DEPDC1-205ENST00000525124 ZNF692Q9BU19 519 aaPredicted RBP15.23■□□□□ 0.03
DEPDC1-205ENST00000525124 SSUH2Q9Y2M2 353 aa15.23■□□□□ 0.03
DEPDC1-205ENST00000525124 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
DEPDC1-205ENST00000525124 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
DEPDC1-205ENST00000525124 ABCA10Q8WWZ4 1543 aa15.19■□□□□ 0.02
DEPDC1-205ENST00000525124 CYB5RLQ6IPT4 315 aa15.19■□□□□ 0.02
DEPDC1-205ENST00000525124 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
DEPDC1-205ENST00000525124 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
DEPDC1-205ENST00000525124 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
DEPDC1-205ENST00000525124 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
DEPDC1-205ENST00000525124 EVX2Q03828 476 aa15.16■□□□□ 0.02
DEPDC1-205ENST00000525124 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
DEPDC1-205ENST00000525124 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
DEPDC1-205ENST00000525124 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
DEPDC1-205ENST00000525124 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
DEPDC1-205ENST00000525124 ADAMTS12P58397 1594 aa15.08■□□□□ 0
DEPDC1-205ENST00000525124 WRNQ14191 1432 aaPredicted RBP eCLIP15.07■□□□□ 0
DEPDC1-205ENST00000525124 GRIN2AQ12879 1464 aa15.06■□□□□ 0
DEPDC1-205ENST00000525124 SHROOM2Q13796 1616 aa15.03■□□□□ -0
DEPDC1-205ENST00000525124 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
DEPDC1-205ENST00000525124 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
DEPDC1-205ENST00000525124 NUP160Q12769 1436 aa15.02■□□□□ -0
DEPDC1-205ENST00000525124 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
DEPDC1-205ENST00000525124 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
DEPDC1-205ENST00000525124 ERCC6L2Q5T890 1561 aa14.96□□□□□ -0.01
DEPDC1-205ENST00000525124 C19orf67A6NJJ6 358 aa14.94□□□□□ -0.02
DEPDC1-205ENST00000525124 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
DEPDC1-205ENST00000525124 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
DEPDC1-205ENST00000525124 RUSC2Q8N2Y8 1516 aa14.88□□□□□ -0.03
DEPDC1-205ENST00000525124 KIF13AQ9H1H9 1805 aa14.88□□□□□ -0.03
DEPDC1-205ENST00000525124 CUL7Q14999 1698 aa14.85□□□□□ -0.03
DEPDC1-205ENST00000525124 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
DEPDC1-205ENST00000525124 PRG4Q92954 1404 aaPredicted RBP14.81□□□□□ -0.04
DEPDC1-205ENST00000525124 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
DEPDC1-205ENST00000525124 GABBR2O75899 941 aa14.76□□□□□ -0.05
DEPDC1-205ENST00000525124 KIAA0586Q9BVV6 1533 aa14.76□□□□□ -0.05
DEPDC1-205ENST00000525124 KIF27Q86VH2 1401 aa14.75□□□□□ -0.05
DEPDC1-205ENST00000525124 MAPKBP1O60336 1514 aa14.75□□□□□ -0.05
DEPDC1-205ENST00000525124 ADCY10Q96PN6 1610 aa14.74□□□□□ -0.05
DEPDC1-205ENST00000525124 IGF1RP08069 1367 aa14.73□□□□□ -0.05
DEPDC1-205ENST00000525124 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
DEPDC1-205ENST00000525124 DIP2BQ9P265 1576 aa14.69□□□□□ -0.06
DEPDC1-205ENST00000525124 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
DEPDC1-205ENST00000525124 IQGAP2Q13576 1575 aa14.64□□□□□ -0.07
DEPDC1-205ENST00000525124 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
DEPDC1-205ENST00000525124 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
DEPDC1-205ENST00000525124 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
DEPDC1-205ENST00000525124 TSPOAP1O95153 1857 aa14.6□□□□□ -0.07
DEPDC1-205ENST00000525124 CARMIL2Q6F5E8 1435 aa14.58□□□□□ -0.07
DEPDC1-205ENST00000525124 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
DEPDC1-205ENST00000525124 FAM69CQ0P6D2 419 aa14.57□□□□□ -0.08
DEPDC1-205ENST00000525124 TNIKQ9UKE5 1360 aa14.57□□□□□ -0.08
DEPDC1-205ENST00000525124 PTPRGP23470 1445 aa14.57□□□□□ -0.08
DEPDC1-205ENST00000525124 UHRF1BP1LA0JNW5 1464 aa14.57□□□□□ -0.08
DEPDC1-205ENST00000525124 KDM6BO15054 1643 aa14.56□□□□□ -0.08
DEPDC1-205ENST00000525124 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
DEPDC1-205ENST00000525124 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
DEPDC1-205ENST00000525124 UGGT2Q9NYU1 1516 aa14.55□□□□□ -0.08
DEPDC1-205ENST00000525124 GLI2P10070 1586 aa14.55□□□□□ -0.08
DEPDC1-205ENST00000525124 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
DEPDC1-205ENST00000525124 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
DEPDC1-205ENST00000525124 DISP1Q96F81 1524 aa14.53□□□□□ -0.08
DEPDC1-205ENST00000525124 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms