RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
DEPDC1-205ENST00000525124 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
DEPDC1-205ENST00000525124 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
DEPDC1-205ENST00000525124 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
DEPDC1-205ENST00000525124 FOXD1Q16676 465 aa22.82■■□□□ 1.24
DEPDC1-205ENST00000525124 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
DEPDC1-205ENST00000525124 MSH5O43196 834 aa21.33■■□□□ 1.01
DEPDC1-205ENST00000525124 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
DEPDC1-205ENST00000525124 PIAS4Q8N2W9 510 aaPredicted RBP21.25■□□□□ 0.99
DEPDC1-205ENST00000525124 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
DEPDC1-205ENST00000525124 ADRA2BP18089 450 aa21.17■□□□□ 0.98
DEPDC1-205ENST00000525124 POTEDQ86YR6 584 aa21.12■□□□□ 0.97
DEPDC1-205ENST00000525124 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
DEPDC1-205ENST00000525124 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
DEPDC1-205ENST00000525124 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
DEPDC1-205ENST00000525124 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
DEPDC1-205ENST00000525124 ABCC9O60706 1549 aa18.97■□□□□ 0.63
DEPDC1-205ENST00000525124 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
DEPDC1-205ENST00000525124 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
DEPDC1-205ENST00000525124 DCAF8L1A6NGE4 600 aa18.53■□□□□ 0.56
DEPDC1-205ENST00000525124 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
DEPDC1-205ENST00000525124 CACNB1Q02641 598 aaPredicted RBP18.4■□□□□ 0.54
DEPDC1-205ENST00000525124 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
DEPDC1-205ENST00000525124 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
DEPDC1-205ENST00000525124 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
DEPDC1-205ENST00000525124 NACADO15069 1562 aa18.07■□□□□ 0.48
DEPDC1-205ENST00000525124 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
DEPDC1-205ENST00000525124 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
DEPDC1-205ENST00000525124 C1QBPQ07021 282 aaKnown RBP17.93■□□□□ 0.46
DEPDC1-205ENST00000525124 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.45
DEPDC1-205ENST00000525124 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
DEPDC1-205ENST00000525124 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
DEPDC1-205ENST00000525124 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
DEPDC1-205ENST00000525124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
DEPDC1-205ENST00000525124 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
DEPDC1-205ENST00000525124 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
DEPDC1-205ENST00000525124 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
DEPDC1-205ENST00000525124 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
DEPDC1-205ENST00000525124 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
DEPDC1-205ENST00000525124 KCNA4P22459 653 aa17.4■□□□□ 0.38
DEPDC1-205ENST00000525124 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
DEPDC1-205ENST00000525124 SCRIBQ14160 1630 aa17.3■□□□□ 0.36
DEPDC1-205ENST00000525124 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
DEPDC1-205ENST00000525124 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
DEPDC1-205ENST00000525124 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
DEPDC1-205ENST00000525124 CECR2Q9BXF3 1484 aa17.13■□□□□ 0.33
DEPDC1-205ENST00000525124 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
DEPDC1-205ENST00000525124 CAPN15O75808 1086 aa17.06■□□□□ 0.32
DEPDC1-205ENST00000525124 DSG3P32926 999 aa17.04■□□□□ 0.32
DEPDC1-205ENST00000525124 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
DEPDC1-205ENST00000525124 APLP2Q06481 763 aa16.72■□□□□ 0.27
DEPDC1-205ENST00000525124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
DEPDC1-205ENST00000525124 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
DEPDC1-205ENST00000525124 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
DEPDC1-205ENST00000525124 ABCB7O75027 752 aa16.68■□□□□ 0.26
DEPDC1-205ENST00000525124 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
DEPDC1-205ENST00000525124 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
DEPDC1-205ENST00000525124 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
DEPDC1-205ENST00000525124 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
DEPDC1-205ENST00000525124 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
DEPDC1-205ENST00000525124 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
DEPDC1-205ENST00000525124 POTEHQ6S545 545 aa16.51■□□□□ 0.23
DEPDC1-205ENST00000525124 CUX2O14529 1486 aa16.49■□□□□ 0.23
DEPDC1-205ENST00000525124 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
DEPDC1-205ENST00000525124 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
DEPDC1-205ENST00000525124 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
DEPDC1-205ENST00000525124 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
DEPDC1-205ENST00000525124 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
DEPDC1-205ENST00000525124 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
DEPDC1-205ENST00000525124 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
DEPDC1-205ENST00000525124 POLA2Q14181 598 aa16.32■□□□□ 0.2
DEPDC1-205ENST00000525124 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
DEPDC1-205ENST00000525124 NESP48681 1621 aa16.3■□□□□ 0.2
DEPDC1-205ENST00000525124 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
DEPDC1-205ENST00000525124 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
DEPDC1-205ENST00000525124 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
DEPDC1-205ENST00000525124 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
DEPDC1-205ENST00000525124 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
DEPDC1-205ENST00000525124 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
DEPDC1-205ENST00000525124 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
DEPDC1-205ENST00000525124 WIZO95785 1651 aa16.14■□□□□ 0.17
DEPDC1-205ENST00000525124 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
DEPDC1-205ENST00000525124 ZBTB22O15209 634 aa16.02■□□□□ 0.16
DEPDC1-205ENST00000525124 WDR62O43379 1518 aa16.02■□□□□ 0.15
DEPDC1-205ENST00000525124 MRC2Q9UBG0 1479 aa16.01■□□□□ 0.15
DEPDC1-205ENST00000525124 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
DEPDC1-205ENST00000525124 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
DEPDC1-205ENST00000525124 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
DEPDC1-205ENST00000525124 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
DEPDC1-205ENST00000525124 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
DEPDC1-205ENST00000525124 CFTRP13569 1480 aa15.92■□□□□ 0.14
DEPDC1-205ENST00000525124 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
DEPDC1-205ENST00000525124 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
DEPDC1-205ENST00000525124 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
DEPDC1-205ENST00000525124 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
DEPDC1-205ENST00000525124 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
DEPDC1-205ENST00000525124 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
DEPDC1-205ENST00000525124 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
DEPDC1-205ENST00000525124 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
DEPDC1-205ENST00000525124 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms