RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
DENND3-217ENST00000521835 NESP48681 1621 aa17.58■□□□□ 0.41
DENND3-217ENST00000521835 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.41
DENND3-217ENST00000521835 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
DENND3-217ENST00000521835 KCNH8Q96L42 1107 aa17.55■□□□□ 0.4
DENND3-217ENST00000521835 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
DENND3-217ENST00000521835 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
DENND3-217ENST00000521835 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.39
DENND3-217ENST00000521835 RRBP1Q9P2E9 1410 aaKnown RBP17.52■□□□□ 0.39
DENND3-217ENST00000521835 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
DENND3-217ENST00000521835 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
DENND3-217ENST00000521835 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
DENND3-217ENST00000521835 BCANQ96GW7 911 aa17.44■□□□□ 0.38
DENND3-217ENST00000521835 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
DENND3-217ENST00000521835 LRRC9Q6ZRR7 1453 aa17.42■□□□□ 0.38
DENND3-217ENST00000521835 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
DENND3-217ENST00000521835 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
DENND3-217ENST00000521835 TIAM1Q13009 1591 aa17.41■□□□□ 0.38
DENND3-217ENST00000521835 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
DENND3-217ENST00000521835 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
DENND3-217ENST00000521835 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
DENND3-217ENST00000521835 PCF11O94913 1555 aaKnown RBP17.37■□□□□ 0.37
DENND3-217ENST00000521835 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
DENND3-217ENST00000521835 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
DENND3-217ENST00000521835 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
DENND3-217ENST00000521835 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
DENND3-217ENST00000521835 MAPKBP1O60336 1514 aa17.3■□□□□ 0.36
DENND3-217ENST00000521835 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
DENND3-217ENST00000521835 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
DENND3-217ENST00000521835 WDR97A6NE52 1622 aa17.27■□□□□ 0.36
DENND3-217ENST00000521835 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
DENND3-217ENST00000521835 FOXD1Q16676 465 aa17.25■□□□□ 0.35
DENND3-217ENST00000521835 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
DENND3-217ENST00000521835 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
DENND3-217ENST00000521835 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
DENND3-217ENST00000521835 FBLN2P98095 1184 aa17.22■□□□□ 0.35
DENND3-217ENST00000521835 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
DENND3-217ENST00000521835 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
DENND3-217ENST00000521835 CASKIN1Q8WXD9 1431 aa17.2■□□□□ 0.34
DENND3-217ENST00000521835 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
DENND3-217ENST00000521835 ANP32CO43423 234 aa17.19■□□□□ 0.34
DENND3-217ENST00000521835 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
DENND3-217ENST00000521835 FKBP8Q14318 412 aa17.19■□□□□ 0.34
DENND3-217ENST00000521835 FYCO1Q9BQS8 1478 aa17.17■□□□□ 0.34
DENND3-217ENST00000521835 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
DENND3-217ENST00000521835 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
DENND3-217ENST00000521835 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
DENND3-217ENST00000521835 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
DENND3-217ENST00000521835 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
DENND3-217ENST00000521835 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
DENND3-217ENST00000521835 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
DENND3-217ENST00000521835 MAP3K1Q13233 1512 aa17.12■□□□□ 0.33
DENND3-217ENST00000521835 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
DENND3-217ENST00000521835 CFAP43Q8NDM7 1665 aa17.1■□□□□ 0.33
DENND3-217ENST00000521835 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
DENND3-217ENST00000521835 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
DENND3-217ENST00000521835 NEFLP07196 543 aa17.08■□□□□ 0.33
DENND3-217ENST00000521835 EFCAB5A4FU69 1503 aa17.08■□□□□ 0.33
DENND3-217ENST00000521835 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
DENND3-217ENST00000521835 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
DENND3-217ENST00000521835 MYOM3Q5VTT5 1437 aa17.06■□□□□ 0.32
DENND3-217ENST00000521835 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
DENND3-217ENST00000521835 CUL7Q14999 1698 aa17.04■□□□□ 0.32
DENND3-217ENST00000521835 HNRNPUQ00839 825 aaKnown RBP eCLIP17.04■□□□□ 0.32
DENND3-217ENST00000521835 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
DENND3-217ENST00000521835 CDK13Q14004 1512 aaKnown RBP17.04■□□□□ 0.32
DENND3-217ENST00000521835 NAIPQ13075 1403 aa17.02■□□□□ 0.32
DENND3-217ENST00000521835 HSPA5P11021 654 aaKnown RBP17.01■□□□□ 0.31
DENND3-217ENST00000521835 UACAQ9BZF9 1416 aa17■□□□□ 0.31
DENND3-217ENST00000521835 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
DENND3-217ENST00000521835 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
DENND3-217ENST00000521835 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
DENND3-217ENST00000521835 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
DENND3-217ENST00000521835 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
DENND3-217ENST00000521835 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
DENND3-217ENST00000521835 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
DENND3-217ENST00000521835 FAM9BQ8IZU0 186 aa16.97■□□□□ 0.31
DENND3-217ENST00000521835 MAGI3Q5TCQ9 1506 aa16.97■□□□□ 0.31
DENND3-217ENST00000521835 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
DENND3-217ENST00000521835 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
DENND3-217ENST00000521835 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
DENND3-217ENST00000521835 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
DENND3-217ENST00000521835 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
DENND3-217ENST00000521835 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
DENND3-217ENST00000521835 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
DENND3-217ENST00000521835 LRRIQ1Q96JM4 1722 aa16.92■□□□□ 0.3
DENND3-217ENST00000521835 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
DENND3-217ENST00000521835 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
DENND3-217ENST00000521835 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
DENND3-217ENST00000521835 EHBP1L1Q8N3D4 1523 aa16.9■□□□□ 0.3
DENND3-217ENST00000521835 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.3
DENND3-217ENST00000521835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.3
DENND3-217ENST00000521835 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
DENND3-217ENST00000521835 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
DENND3-217ENST00000521835 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
DENND3-217ENST00000521835 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
DENND3-217ENST00000521835 CCER2I3L3R5 266 aa16.87■□□□□ 0.29
DENND3-217ENST00000521835 KDM6BO15054 1643 aa16.86■□□□□ 0.29
DENND3-217ENST00000521835 IQGAP2Q13576 1575 aa16.86■□□□□ 0.29
DENND3-217ENST00000521835 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms