RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	ZNF608	Q9ULD9	1512 aa	Predicted RBP	9.47	□□□□□ -0.89
CDH17-205	ENST00000521491	RIMBP3C	A6NJZ7	1639 aa		9.47	□□□□□ -0.89
CDH17-205	ENST00000521491	RIMBP3B	A6NNM3	1639 aa		9.47	□□□□□ -0.89
CDH17-205	ENST00000521491	RIMBP3	Q9UFD9	1639 aa		9.47	□□□□□ -0.89
CDH17-205	ENST00000521491	PRDM2	Q13029	1718 aa		9.45	□□□□□ -0.9
CDH17-205	ENST00000521491	CCDC88B	A6NC98	1476 aa		9.44	□□□□□ -0.9
CDH17-205	ENST00000521491	PROM2	Q8N271	834 aa		9.43	□□□□□ -0.9
CDH17-205	ENST00000521491	IFT140	Q96RY7	1462 aa		9.42	□□□□□ -0.9
CDH17-205	ENST00000521491	TOPBP1	Q92547	1522 aa		9.41	□□□□□ -0.9
CDH17-205	ENST00000521491	ARHGEF11	O15085	1522 aa		9.41	□□□□□ -0.9
CDH17-205	ENST00000521491	FBXO3	Q9UK99	471 aa		9.4	□□□□□ -0.9
CDH17-205	ENST00000521491	EIF4G3	O43432	1585 aa	Known RBP	9.39	□□□□□ -0.91
CDH17-205	ENST00000521491	SPDYE2B	A6NHP3	402 aa		9.39	□□□□□ -0.91
CDH17-205	ENST00000521491	SPDYE6	P0CI01	402 aa		9.39	□□□□□ -0.91
CDH17-205	ENST00000521491	SPDYE2	Q495Y8	402 aa		9.39	□□□□□ -0.91
CDH17-205	ENST00000521491	CYB5RL	Q6IPT4	315 aa		9.37	□□□□□ -0.91
CDH17-205	ENST00000521491	ZNF692	Q9BU19	519 aa	Predicted RBP	9.37	□□□□□ -0.91
CDH17-205	ENST00000521491	AQR	O60306	1485 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
CDH17-205	ENST00000521491	CHD1	O14646	1710 aa		9.36	□□□□□ -0.91
CDH17-205	ENST00000521491	DNMBP	Q6XZF7	1577 aa		9.35	□□□□□ -0.91
CDH17-205	ENST00000521491	TARBP1	Q13395	1621 aa	Known RBP	9.34	□□□□□ -0.91
CDH17-205	ENST00000521491	ABCC8	Q09428	1581 aa		9.33	□□□□□ -0.92
CDH17-205	ENST00000521491	SSUH2	Q9Y2M2	353 aa		9.33	□□□□□ -0.92
CDH17-205	ENST00000521491	ARAP1	Q96P48	1450 aa		9.32	□□□□□ -0.92
CDH17-205	ENST00000521491	POLA1	P09884	1462 aa	Predicted RBP	9.3	□□□□□ -0.92
CDH17-205	ENST00000521491	RAD54L2	Q9Y4B4	1467 aa		9.3	□□□□□ -0.92
CDH17-205	ENST00000521491	AMER1	Q5JTC6	1135 aa	Predicted RBP	9.29	□□□□□ -0.92
CDH17-205	ENST00000521491	TDRD9	Q8NDG6	1382 aa	Known RBP	9.28	□□□□□ -0.92
CDH17-205	ENST00000521491	SOGA1	O94964	1423 aa		9.26	□□□□□ -0.93
CDH17-205	ENST00000521491	SNAPC4	Q5SXM2	1469 aa		9.24	□□□□□ -0.93
CDH17-205	ENST00000521491	RBM42	Q9BTD8	480 aa	Known RBP	9.24	□□□□□ -0.93
CDH17-205	ENST00000521491	FGD5	Q6ZNL6	1462 aa		9.23	□□□□□ -0.93
CDH17-205	ENST00000521491	CLASP1	Q7Z460	1538 aa		9.23	□□□□□ -0.93
CDH17-205	ENST00000521491	VASP	P50552	380 aa	Predicted RBP	9.23	□□□□□ -0.93
CDH17-205	ENST00000521491	CUX1	P39880	1505 aa		9.21	□□□□□ -0.93
CDH17-205	ENST00000521491	CHMP7	Q8WUX9	453 aa	Predicted RBP	9.21	□□□□□ -0.94
CDH17-205	ENST00000521491	RTN4	Q9NQC3	1192 aa	Known RBP	9.2	□□□□□ -0.94
CDH17-205	ENST00000521491	STAG3	Q9UJ98	1225 aa		9.19	□□□□□ -0.94
CDH17-205	ENST00000521491	SYNJ1	O43426	1573 aa		9.19	□□□□□ -0.94
CDH17-205	ENST00000521491	GRIN2B	Q13224	1484 aa		9.18	□□□□□ -0.94
CDH17-205	ENST00000521491	MAGI1	Q96QZ7	1491 aa	Predicted RBP	9.18	□□□□□ -0.94
CDH17-205	ENST00000521491	WDR97	A6NE52	1622 aa		9.17	□□□□□ -0.94
CDH17-205	ENST00000521491	SYNJ2	O15056	1496 aa		9.16	□□□□□ -0.94
CDH17-205	ENST00000521491	AKT1S1	Q96B36	256 aa		9.15	□□□□□ -0.94
CDH17-205	ENST00000521491	PBRM1	Q86U86	1689 aa		9.15	□□□□□ -0.94
CDH17-205	ENST00000521491	GAPVD1	Q14C86	1478 aa		9.14	□□□□□ -0.95
CDH17-205	ENST00000521491	BIVM-ERCC5	R4GMW8	1640 aa		9.13	□□□□□ -0.95
CDH17-205	ENST00000521491	ERCC6L2	Q5T890	1561 aa		9.12	□□□□□ -0.95
CDH17-205	ENST00000521491	WRN	Q14191	1432 aa	Predicted RBP eCLIP	9.12	□□□□□ -0.95
CDH17-205	ENST00000521491	TOP2B	Q02880	1626 aa		9.11	□□□□□ -0.95
CDH17-205	ENST00000521491	ABCA5	Q8WWZ7	1642 aa		9.11	□□□□□ -0.95
CDH17-205	ENST00000521491	ABCA10	Q8WWZ4	1543 aa		9.1	□□□□□ -0.95
CDH17-205	ENST00000521491	IFNLR1	Q8IU57	520 aa	Predicted RBP	9.09	□□□□□ -0.95
CDH17-205	ENST00000521491	CEP170	Q5SW79	1584 aa		9.07	□□□□□ -0.96
CDH17-205	ENST00000521491	SPDYE1	Q8NFV5	336 aa	Predicted RBP	9.07	□□□□□ -0.96
CDH17-205	ENST00000521491	GRIN2A	Q12879	1464 aa		9.07	□□□□□ -0.96
CDH17-205	ENST00000521491	PLCD3	Q8N3E9	789 aa		9.06	□□□□□ -0.96
CDH17-205	ENST00000521491	ADAMTS12	P58397	1594 aa		9.05	□□□□□ -0.96
CDH17-205	ENST00000521491	MIER1	Q8N108	512 aa		9.04	□□□□□ -0.96
CDH17-205	ENST00000521491	NUP160	Q12769	1436 aa		9.04	□□□□□ -0.96
CDH17-205	ENST00000521491	SHROOM2	Q13796	1616 aa		9.03	□□□□□ -0.96
CDH17-205	ENST00000521491	PLEKHG5	O94827	1062 aa		9.03	□□□□□ -0.96
CDH17-205	ENST00000521491	REM2	Q8IYK8	340 aa	Predicted RBP	9.03	□□□□□ -0.96
CDH17-205	ENST00000521491	KLHL34	Q8N239	644 aa		9.03	□□□□□ -0.96
CDH17-205	ENST00000521491	FHAD1	B1AJZ9	1412 aa		9.01	□□□□□ -0.97
CDH17-205	ENST00000521491	KIF13A	Q9H1H9	1805 aa		9	□□□□□ -0.97
CDH17-205	ENST00000521491	ZBTB47	Q9UFB7	747 aa	Predicted RBP	8.99	□□□□□ -0.97
CDH17-205	ENST00000521491	PRG4	Q92954	1404 aa	Predicted RBP	8.98	□□□□□ -0.97
CDH17-205	ENST00000521491	SPOCK2	Q92563	424 aa		8.98	□□□□□ -0.97
CDH17-205	ENST00000521491	CLEC11A	Q9Y240	323 aa		8.98	□□□□□ -0.97
CDH17-205	ENST00000521491	ERICH3	Q5RHP9	1530 aa		8.97	□□□□□ -0.97
CDH17-205	ENST00000521491	JPH4	Q96JJ6	628 aa		8.97	□□□□□ -0.97
CDH17-205	ENST00000521491	PRR29	P0C7W0	189 aa		8.95	□□□□□ -0.98
CDH17-205	ENST00000521491	RUSC2	Q8N2Y8	1516 aa		8.95	□□□□□ -0.98
CDH17-205	ENST00000521491	FAM69C	Q0P6D2	419 aa		8.93	□□□□□ -0.98
CDH17-205	ENST00000521491	PITPNM1	O00562	1244 aa		8.92	□□□□□ -0.98
CDH17-205	ENST00000521491	FAM9A	Q8IZU1	332 aa	Predicted RBP	8.92	□□□□□ -0.98
CDH17-205	ENST00000521491	ABCC10	Q5T3U5	1492 aa		8.91	□□□□□ -0.98
CDH17-205	ENST00000521491	ADCY10	Q96PN6	1610 aa		8.91	□□□□□ -0.98
CDH17-205	ENST00000521491	DIP2B	Q9P265	1576 aa		8.9	□□□□□ -0.99
CDH17-205	ENST00000521491	NPM1	P06748	294 aa	Known RBP eCLIP	8.89	□□□□□ -0.99
CDH17-205	ENST00000521491	MAPKBP1	O60336	1514 aa		8.89	□□□□□ -0.99
CDH17-205	ENST00000521491	EEA1	Q15075	1411 aa		8.88	□□□□□ -0.99
CDH17-205	ENST00000521491	KIF27	Q86VH2	1401 aa		8.88	□□□□□ -0.99
CDH17-205	ENST00000521491	KDM4F	A0A1W2PPD8	638 aa		8.87	□□□□□ -0.99
CDH17-205	ENST00000521491	TSPOAP1	O95153	1857 aa		8.87	□□□□□ -0.99
CDH17-205	ENST00000521491	PKD2	Q13563	968 aa		8.86	□□□□□ -0.99
CDH17-205	ENST00000521491	CREBZF	Q9NS37	354 aa		8.86	□□□□□ -0.99
CDH17-205	ENST00000521491	IGF1R	P08069	1367 aa		8.86	□□□□□ -0.99
CDH17-205	ENST00000521491	KIAA0586	Q9BVV6	1533 aa		8.85	□□□□□ -0.99
CDH17-205	ENST00000521491	TTBK1	Q5TCY1	1321 aa	Predicted RBP	8.85	□□□□□ -0.99
CDH17-205	ENST00000521491	CUL7	Q14999	1698 aa		8.85	□□□□□ -0.99
CDH17-205	ENST00000521491	KDM6B	O15054	1643 aa		8.85	□□□□□ -0.99
CDH17-205	ENST00000521491	KIF21B	O75037	1637 aa		8.85	□□□□□ -0.99
CDH17-205	ENST00000521491	PTPRG	P23470	1445 aa		8.81	□□□□□ -1
CDH17-205	ENST00000521491	ECM2	O94769	699 aa	Predicted RBP	8.8	□□□□□ -1
CDH17-205	ENST00000521491	CIZ1	Q9ULV3	898 aa	Predicted RBP	8.8	□□□□□ -1
CDH17-205	ENST00000521491	PPRC1	Q5VV67	1664 aa	Known RBP	8.79	□□□□□ -1
CDH17-205	ENST00000521491	GOLGA3	Q08378	1498 aa		8.79	□□□□□ -1
CDH17-205	ENST00000521491	PRX	Q9BXM0	1461 aa		8.79	□□□□□ -1

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