RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.27	■□□□□ 0.2
CDH17-205	ENST00000521491	CHIC1	Q5VXU3	224 aa		16.14	■□□□□ 0.17
CDH17-205	ENST00000521491	PHF23	Q9BUL5	403 aa	Predicted RBP	14.17	□□□□□ -0.14
CDH17-205	ENST00000521491	SENP3	Q9H4L4	574 aa	Predicted RBP	13.85	□□□□□ -0.19
CDH17-205	ENST00000521491	PLPPR3	Q6T4P5	718 aa		13.22	□□□□□ -0.29
CDH17-205	ENST00000521491	FOXD1	Q16676	465 aa		12.77	□□□□□ -0.37
CDH17-205	ENST00000521491	NISCH	Q9Y2I1	1504 aa		12.7	□□□□□ -0.38
CDH17-205	ENST00000521491	ADRA2B	P18089	450 aa		12.44	□□□□□ -0.42
CDH17-205	ENST00000521491	PPP6R1	Q9UPN7	881 aa		12.42	□□□□□ -0.42
CDH17-205	ENST00000521491	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.12	□□□□□ -0.47
CDH17-205	ENST00000521491	MSH5	O43196	834 aa		11.76	□□□□□ -0.53
CDH17-205	ENST00000521491	PPP4R3CP	Q6ZMV5	832 aa		11.65	□□□□□ -0.54
CDH17-205	ENST00000521491	ABCC9	O60706	1549 aa		11.61	□□□□□ -0.55
CDH17-205	ENST00000521491	KCNA4	P22459	653 aa		11.59	□□□□□ -0.55
CDH17-205	ENST00000521491	SCAF1	Q9H7N4	1312 aa	Known RBP	11.46	□□□□□ -0.57
CDH17-205	ENST00000521491	NCBP3	Q53F19	620 aa	Known RBP	11.46	□□□□□ -0.57
CDH17-205	ENST00000521491	CCDC180	Q9P1Z9	1646 aa		11.42	□□□□□ -0.58
CDH17-205	ENST00000521491	CNKSR2	Q8WXI2	1034 aa		11.3	□□□□□ -0.6
CDH17-205	ENST00000521491	NPM3	O75607	178 aa	Known RBP	11.23	□□□□□ -0.61
CDH17-205	ENST00000521491	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.2	□□□□□ -0.62
CDH17-205	ENST00000521491	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.11	□□□□□ -0.63
CDH17-205	ENST00000521491	DNAJC5B	Q9UF47	199 aa		11.07	□□□□□ -0.64
CDH17-205	ENST00000521491	DMRT2	Q9Y5R5	561 aa		11.07	□□□□□ -0.64
CDH17-205	ENST00000521491	RNF216	Q9NWF9	866 aa	Predicted RBP	11.03	□□□□□ -0.64
CDH17-205	ENST00000521491	EHMT2	Q96KQ7	1210 aa		11	□□□□□ -0.65
CDH17-205	ENST00000521491	RB1CC1	Q8TDY2	1594 aa		10.94	□□□□□ -0.66
CDH17-205	ENST00000521491	HOXD11	P31277	338 aa	Predicted RBP	10.92	□□□□□ -0.66
CDH17-205	ENST00000521491	NACAD	O15069	1562 aa		10.83	□□□□□ -0.68
CDH17-205	ENST00000521491	DCAF8L2	P0C7V8	631 aa		10.81	□□□□□ -0.68
CDH17-205	ENST00000521491	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
CDH17-205	ENST00000521491	CSRNP3	Q8WYN3	585 aa		10.77	□□□□□ -0.69
CDH17-205	ENST00000521491	UNC13A	Q9UPW8	1703 aa		10.75	□□□□□ -0.69
CDH17-205	ENST00000521491	BICRA	Q9NZM4	1560 aa		10.68	□□□□□ -0.7
CDH17-205	ENST00000521491	ZBTB22	O15209	634 aa		10.65	□□□□□ -0.7
CDH17-205	ENST00000521491	FOXD4L1	Q9NU39	408 aa		10.65	□□□□□ -0.7
CDH17-205	ENST00000521491	MYO15B	Q96JP2	1530 aa		10.61	□□□□□ -0.71
CDH17-205	ENST00000521491	DCAF8L1	A6NGE4	600 aa		10.57	□□□□□ -0.72
CDH17-205	ENST00000521491	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.55	□□□□□ -0.72
CDH17-205	ENST00000521491	SLC4A2	P04920	1241 aa		10.54	□□□□□ -0.72
CDH17-205	ENST00000521491	CC2D2A	Q9P2K1	1620 aa		10.47	□□□□□ -0.73
CDH17-205	ENST00000521491	CECR2	Q9BXF3	1484 aa		10.45	□□□□□ -0.74
CDH17-205	ENST00000521491	SCRIB	Q14160	1630 aa		10.44	□□□□□ -0.74
CDH17-205	ENST00000521491	DCAF1	Q9Y4B6	1507 aa		10.43	□□□□□ -0.74
CDH17-205	ENST00000521491	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
CDH17-205	ENST00000521491	SHROOM4	Q9ULL8	1493 aa		10.42	□□□□□ -0.74
CDH17-205	ENST00000521491	MYCN	P04198	464 aa	Predicted RBP	10.41	□□□□□ -0.74
CDH17-205	ENST00000521491	EIF4G1	Q04637	1599 aa	Known RBP	10.4	□□□□□ -0.74
CDH17-205	ENST00000521491	POTED	Q86YR6	584 aa		10.39	□□□□□ -0.75
CDH17-205	ENST00000521491	ATXN8OS	P0DMR3	200 aa		10.29	□□□□□ -0.76
CDH17-205	ENST00000521491	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.26	□□□□□ -0.77
CDH17-205	ENST00000521491	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.26	□□□□□ -0.77
CDH17-205	ENST00000521491		U3KPZ7	1027 aa	Predicted RBP	10.24	□□□□□ -0.77
CDH17-205	ENST00000521491	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.22	□□□□□ -0.77
CDH17-205	ENST00000521491	DNAJC5	Q9H3Z4	198 aa		10.2	□□□□□ -0.78
CDH17-205	ENST00000521491	APLP2	Q06481	763 aa		10.12	□□□□□ -0.79
CDH17-205	ENST00000521491	RNF39	Q9H2S5	420 aa		10.07	□□□□□ -0.8
CDH17-205	ENST00000521491	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.04	□□□□□ -0.8
CDH17-205	ENST00000521491	NCAPD3	P42695	1498 aa		10.01	□□□□□ -0.81
CDH17-205	ENST00000521491	CUX2	O14529	1486 aa		10	□□□□□ -0.81
CDH17-205	ENST00000521491	ERCC6	Q03468	1493 aa		10	□□□□□ -0.81
CDH17-205	ENST00000521491	C1QBP	Q07021	282 aa	Known RBP	9.99	□□□□□ -0.81
CDH17-205	ENST00000521491	ATAD2B	Q9ULI0	1458 aa		9.98	□□□□□ -0.81
CDH17-205	ENST00000521491	NES	P48681	1621 aa		9.95	□□□□□ -0.82
CDH17-205	ENST00000521491	SMARCA4	P51532	1647 aa		9.93	□□□□□ -0.82
CDH17-205	ENST00000521491	ZNF219	Q9P2Y4	722 aa	Predicted RBP	9.92	□□□□□ -0.82
CDH17-205	ENST00000521491	SMARCA2	P51531	1590 aa		9.92	□□□□□ -0.82
CDH17-205	ENST00000521491	HMGXB3	Q12766	1538 aa		9.91	□□□□□ -0.82
CDH17-205	ENST00000521491	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.88	□□□□□ -0.83
CDH17-205	ENST00000521491	CAPN15	O75808	1086 aa		9.87	□□□□□ -0.83
CDH17-205	ENST00000521491	BAZ1B	Q9UIG0	1483 aa	Known RBP	9.85	□□□□□ -0.83
CDH17-205	ENST00000521491	TRH	P20396	242 aa	Predicted RBP	9.85	□□□□□ -0.83
CDH17-205	ENST00000521491	THOC2	Q8NI27	1593 aa	Known RBP	9.84	□□□□□ -0.83
CDH17-205	ENST00000521491	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	9.84	□□□□□ -0.83
CDH17-205	ENST00000521491	MROH2B	Q7Z745	1585 aa		9.81	□□□□□ -0.84
CDH17-205	ENST00000521491	PEG3	Q9GZU2	1588 aa		9.81	□□□□□ -0.84
CDH17-205	ENST00000521491	KIF21A	Q7Z4S6	1674 aa		9.8	□□□□□ -0.84
CDH17-205	ENST00000521491	LAMC3	Q9Y6N6	1575 aa		9.8	□□□□□ -0.84
CDH17-205	ENST00000521491	POLA2	Q14181	598 aa		9.74	□□□□□ -0.85
CDH17-205	ENST00000521491	FKBP8	Q14318	412 aa		9.74	□□□□□ -0.85
CDH17-205	ENST00000521491	PDS5B	Q9NTI5	1447 aa		9.73	□□□□□ -0.85
CDH17-205	ENST00000521491	TRIM41	Q8WV44	630 aa		9.72	□□□□□ -0.85
CDH17-205	ENST00000521491	CADPS	Q9ULU8	1353 aa		9.7	□□□□□ -0.86
CDH17-205	ENST00000521491	WIZ	O95785	1651 aa		9.69	□□□□□ -0.86
CDH17-205	ENST00000521491	FBLN2	P98095	1184 aa		9.69	□□□□□ -0.86
CDH17-205	ENST00000521491	MRC2	Q9UBG0	1479 aa		9.68	□□□□□ -0.86
CDH17-205	ENST00000521491	RSF1	Q96T23	1441 aa	Predicted RBP	9.67	□□□□□ -0.86
CDH17-205	ENST00000521491	ABCB7	O75027	752 aa		9.67	□□□□□ -0.86
CDH17-205	ENST00000521491	ZBTB12	Q9Y330	459 aa	Predicted RBP	9.67	□□□□□ -0.86
CDH17-205	ENST00000521491	WDR62	O43379	1518 aa		9.66	□□□□□ -0.86
CDH17-205	ENST00000521491	CACNB1	Q02641	598 aa	Predicted RBP	9.66	□□□□□ -0.86
CDH17-205	ENST00000521491	SUPT5H	O00267	1087 aa	Known RBP	9.64	□□□□□ -0.87
CDH17-205	ENST00000521491	DSG3	P32926	999 aa		9.64	□□□□□ -0.87
CDH17-205	ENST00000521491	MKRN4P	Q13434	485 aa	Predicted RBP	9.64	□□□□□ -0.87
CDH17-205	ENST00000521491	CEP164	Q9UPV0	1460 aa		9.61	□□□□□ -0.87
CDH17-205	ENST00000521491	FANCD2	Q9BXW9	1451 aa		9.6	□□□□□ -0.87
CDH17-205	ENST00000521491	CFTR	P13569	1480 aa		9.57	□□□□□ -0.88
CDH17-205	ENST00000521491	SPDYE4	A6NLX3	237 aa		9.56	□□□□□ -0.88
CDH17-205	ENST00000521491	URB2	Q14146	1524 aa	Known RBP	9.56	□□□□□ -0.88
CDH17-205	ENST00000521491	OSCAR	Q8IYS5	282 aa		9.55	□□□□□ -0.88
CDH17-205	ENST00000521491	TOP2A	P11388	1531 aa	Known RBP	9.55	□□□□□ -0.88

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