RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
SPIDR-211ENST00000519401 TOP2BQ02880 1626 aa16.38■□□□□ 0.21
SPIDR-211ENST00000519401 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
SPIDR-211ENST00000519401 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
SPIDR-211ENST00000519401 WDR97A6NE52 1622 aa16.33■□□□□ 0.21
SPIDR-211ENST00000519401 MSH5O43196 834 aa16.32■□□□□ 0.2
SPIDR-211ENST00000519401 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
SPIDR-211ENST00000519401 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
SPIDR-211ENST00000519401 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
SPIDR-211ENST00000519401 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
SPIDR-211ENST00000519401 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
SPIDR-211ENST00000519401 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
SPIDR-211ENST00000519401 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
SPIDR-211ENST00000519401 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
SPIDR-211ENST00000519401 CHD1O14646 1710 aa16.2■□□□□ 0.18
SPIDR-211ENST00000519401 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-211ENST00000519401 FBLN2P98095 1184 aa16.18■□□□□ 0.18
SPIDR-211ENST00000519401 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-211ENST00000519401 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
SPIDR-211ENST00000519401 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
SPIDR-211ENST00000519401 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
SPIDR-211ENST00000519401 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
SPIDR-211ENST00000519401 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
SPIDR-211ENST00000519401 FKBP8Q14318 412 aa16.12■□□□□ 0.17
SPIDR-211ENST00000519401 NEFLP07196 543 aa16.11■□□□□ 0.17
SPIDR-211ENST00000519401 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
SPIDR-211ENST00000519401 ERICH3Q5RHP9 1530 aa16.1■□□□□ 0.17
SPIDR-211ENST00000519401 KIF27Q86VH2 1401 aa16.06■□□□□ 0.16
SPIDR-211ENST00000519401 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
SPIDR-211ENST00000519401 BCANQ96GW7 911 aa16.05■□□□□ 0.16
SPIDR-211ENST00000519401 GRIN2AQ12879 1464 aa16.05■□□□□ 0.16
SPIDR-211ENST00000519401 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
SPIDR-211ENST00000519401 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-211ENST00000519401 IGF1RP08069 1367 aa16.02■□□□□ 0.16
SPIDR-211ENST00000519401 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
SPIDR-211ENST00000519401 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
SPIDR-211ENST00000519401 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
SPIDR-211ENST00000519401 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
SPIDR-211ENST00000519401 EEA1Q15075 1411 aa16■□□□□ 0.15
SPIDR-211ENST00000519401 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
SPIDR-211ENST00000519401 CEP162Q5TB80 1403 aa16■□□□□ 0.15
SPIDR-211ENST00000519401 NUP160Q12769 1436 aa15.98■□□□□ 0.15
SPIDR-211ENST00000519401 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
SPIDR-211ENST00000519401 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
SPIDR-211ENST00000519401 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
SPIDR-211ENST00000519401 PKNOX2Q96KN3 472 aa15.96■□□□□ 0.15
SPIDR-211ENST00000519401 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
SPIDR-211ENST00000519401 CUL7Q14999 1698 aa15.94■□□□□ 0.14
SPIDR-211ENST00000519401 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
SPIDR-211ENST00000519401 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
SPIDR-211ENST00000519401 NOP58Q9Y2X3 529 aaKnown RBP15.88■□□□□ 0.13
SPIDR-211ENST00000519401 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
SPIDR-211ENST00000519401 ERCC6L2Q5T890 1561 aa15.86■□□□□ 0.13
SPIDR-211ENST00000519401 C11orf95C9JLR9 678 aaPredicted RBP15.85■□□□□ 0.13
SPIDR-211ENST00000519401 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
SPIDR-211ENST00000519401 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
SPIDR-211ENST00000519401 ITGAEP38570 1179 aa15.83■□□□□ 0.13
SPIDR-211ENST00000519401 KIF21BO75037 1637 aa15.82■□□□□ 0.12
SPIDR-211ENST00000519401 RTL5Q5HYW3 569 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-211ENST00000519401 IL27Q8NEV9 243 aa15.82■□□□□ 0.12
SPIDR-211ENST00000519401 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
SPIDR-211ENST00000519401 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
SPIDR-211ENST00000519401 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
SPIDR-211ENST00000519401 PRG4Q92954 1404 aaPredicted RBP15.79■□□□□ 0.12
SPIDR-211ENST00000519401 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.79■□□□□ 0.12
SPIDR-211ENST00000519401 PRXQ9BXM0 1461 aa15.77■□□□□ 0.12
SPIDR-211ENST00000519401 CCER2I3L3R5 266 aa15.77■□□□□ 0.12
SPIDR-211ENST00000519401 WASHC2AQ641Q2 1341 aa15.75■□□□□ 0.11
SPIDR-211ENST00000519401 DHX57Q6P158 1386 aaKnown RBP15.74■□□□□ 0.11
SPIDR-211ENST00000519401 GLIPR1L2Q4G1C9 344 aa15.73■□□□□ 0.11
SPIDR-211ENST00000519401 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
SPIDR-211ENST00000519401 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
SPIDR-211ENST00000519401 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
SPIDR-211ENST00000519401 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
SPIDR-211ENST00000519401 NBR1Q14596 966 aa15.72■□□□□ 0.11
SPIDR-211ENST00000519401 WASHC2CQ9Y4E1 1318 aa15.72■□□□□ 0.11
SPIDR-211ENST00000519401 RSPH6AQ9H0K4 717 aa15.7■□□□□ 0.1
SPIDR-211ENST00000519401 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
SPIDR-211ENST00000519401 PPP4R2Q9NY27 417 aa15.67■□□□□ 0.1
SPIDR-211ENST00000519401 PODXL2Q9NZ53 605 aa15.66■□□□□ 0.1
SPIDR-211ENST00000519401 CLIP1P30622 1438 aa15.65■□□□□ 0.1
SPIDR-211ENST00000519401 VPS8Q8N3P4 1428 aa15.65■□□□□ 0.1
SPIDR-211ENST00000519401 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
SPIDR-211ENST00000519401 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
SPIDR-211ENST00000519401 RTN4Q9NQC3 1192 aaKnown RBP15.64■□□□□ 0.09
SPIDR-211ENST00000519401 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
SPIDR-211ENST00000519401 CTTNBP2Q8WZ74 1663 aa15.64■□□□□ 0.09
SPIDR-211ENST00000519401 IPO9Q96P70 1041 aaKnown RBP15.63■□□□□ 0.09
SPIDR-211ENST00000519401 CARMIL2Q6F5E8 1435 aa15.61■□□□□ 0.09
SPIDR-211ENST00000519401 PTPRGP23470 1445 aa15.59■□□□□ 0.09
SPIDR-211ENST00000519401 ANP32AP39687 249 aaKnown RBP15.58■□□□□ 0.09
SPIDR-211ENST00000519401 KIAA0556O60303 1618 aa15.58■□□□□ 0.08
SPIDR-211ENST00000519401 ZBTB47Q9UFB7 747 aaPredicted RBP15.56■□□□□ 0.08
SPIDR-211ENST00000519401 ADCY10Q96PN6 1610 aa15.56■□□□□ 0.08
SPIDR-211ENST00000519401 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
SPIDR-211ENST00000519401 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
SPIDR-211ENST00000519401 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
SPIDR-211ENST00000519401 TRIM52Q96A61 297 aa15.52■□□□□ 0.08
SPIDR-211ENST00000519401 ANP32CO43423 234 aa15.49■□□□□ 0.07
SPIDR-211ENST00000519401 ZMYND15Q9H091 742 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms