RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 PCF11O94913 1555 aaKnown RBP23.95■■□□□ 1.42
PCDHGA11-202ENST00000518882 SETD5Q9C0A6 1442 aa23.95■■□□□ 1.42
PCDHGA11-202ENST00000518882 SUPT16HQ9Y5B9 1047 aaKnown RBP23.91■■□□□ 1.42
PCDHGA11-202ENST00000518882 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.42
PCDHGA11-202ENST00000518882 P3H3Q8IVL6 736 aa23.88■■□□□ 1.41
PCDHGA11-202ENST00000518882 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
PCDHGA11-202ENST00000518882 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
PCDHGA11-202ENST00000518882 KCNH8Q96L42 1107 aa23.85■■□□□ 1.41
PCDHGA11-202ENST00000518882 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
PCDHGA11-202ENST00000518882 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
PCDHGA11-202ENST00000518882 FHOD3Q2V2M9 1422 aa23.82■■□□□ 1.4
PCDHGA11-202ENST00000518882 RAD54L2Q9Y4B4 1467 aa23.8■■□□□ 1.4
PCDHGA11-202ENST00000518882 MYT1Q01538 1121 aa23.8■■□□□ 1.4
PCDHGA11-202ENST00000518882 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
PCDHGA11-202ENST00000518882 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
PCDHGA11-202ENST00000518882 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.4
PCDHGA11-202ENST00000518882 DNMBPQ6XZF7 1577 aa23.77■■□□□ 1.4
PCDHGA11-202ENST00000518882 ABCA10Q8WWZ4 1543 aa23.76■■□□□ 1.39
PCDHGA11-202ENST00000518882 CTTNBP2Q8WZ74 1663 aa23.74■■□□□ 1.39
PCDHGA11-202ENST00000518882 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
PCDHGA11-202ENST00000518882 POLA1P09884 1462 aaPredicted RBP23.74■■□□□ 1.39
PCDHGA11-202ENST00000518882 CASKIN1Q8WXD9 1431 aa23.72■■□□□ 1.39
PCDHGA11-202ENST00000518882 TOPBP1Q92547 1522 aa23.71■■□□□ 1.39
PCDHGA11-202ENST00000518882 DDX10Q13206 875 aaKnown RBP23.71■■□□□ 1.39
PCDHGA11-202ENST00000518882 CUL7Q14999 1698 aa23.7■■□□□ 1.38
PCDHGA11-202ENST00000518882 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.38
PCDHGA11-202ENST00000518882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.38
PCDHGA11-202ENST00000518882 NESP48681 1621 aa23.65■■□□□ 1.38
PCDHGA11-202ENST00000518882 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.38
PCDHGA11-202ENST00000518882 TIMELESSQ9UNS1 1208 aa23.64■■□□□ 1.37
PCDHGA11-202ENST00000518882 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
PCDHGA11-202ENST00000518882 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
PCDHGA11-202ENST00000518882 LRRIQ1Q96JM4 1722 aa23.62■■□□□ 1.37
PCDHGA11-202ENST00000518882 FGD6Q6ZV73 1430 aa23.62■■□□□ 1.37
PCDHGA11-202ENST00000518882 FMN1Q68DA7 1419 aa23.58■■□□□ 1.37
PCDHGA11-202ENST00000518882 TSHZ2Q9NRE2 1034 aa23.57■■□□□ 1.36
PCDHGA11-202ENST00000518882 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
PCDHGA11-202ENST00000518882 CCDC18Q5T9S5 1454 aa23.55■■□□□ 1.36
PCDHGA11-202ENST00000518882 SAMD9Q5K651 1589 aa23.53■■□□□ 1.36
PCDHGA11-202ENST00000518882 PTPN23Q9H3S7 1636 aa23.53■■□□□ 1.36
PCDHGA11-202ENST00000518882 MTUS2Q5JR59 1369 aa23.52■■□□□ 1.36
PCDHGA11-202ENST00000518882 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
PCDHGA11-202ENST00000518882 HFM1A2PYH4 1435 aa23.51■■□□□ 1.35
PCDHGA11-202ENST00000518882 ABCA5Q8WWZ7 1642 aa23.49■■□□□ 1.35
PCDHGA11-202ENST00000518882 UACAQ9BZF9 1416 aa23.48■■□□□ 1.35
PCDHGA11-202ENST00000518882 TONSLQ96HA7 1378 aa23.47■■□□□ 1.35
PCDHGA11-202ENST00000518882 GRIN2BQ13224 1484 aa23.46■■□□□ 1.35
PCDHGA11-202ENST00000518882 NCOA2Q15596 1464 aa23.46■■□□□ 1.35
PCDHGA11-202ENST00000518882 BCANQ96GW7 911 aa23.46■■□□□ 1.35
PCDHGA11-202ENST00000518882 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.35
PCDHGA11-202ENST00000518882 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
PCDHGA11-202ENST00000518882 NAIPQ13075 1403 aa23.44■■□□□ 1.34
PCDHGA11-202ENST00000518882 FKBP8Q14318 412 aa23.44■■□□□ 1.34
PCDHGA11-202ENST00000518882 MYOM3Q5VTT5 1437 aa23.43■■□□□ 1.34
PCDHGA11-202ENST00000518882 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
PCDHGA11-202ENST00000518882 ANP32CO43423 234 aa23.42■■□□□ 1.34
PCDHGA11-202ENST00000518882 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
PCDHGA11-202ENST00000518882 THOC2Q8NI27 1593 aaKnown RBP23.4■■□□□ 1.34
PCDHGA11-202ENST00000518882 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
PCDHGA11-202ENST00000518882 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
PCDHGA11-202ENST00000518882 KDM5BQ9UGL1 1544 aa23.4■■□□□ 1.34
PCDHGA11-202ENST00000518882 EHBP1L1Q8N3D4 1523 aa23.38■■□□□ 1.33
PCDHGA11-202ENST00000518882 MAGI3Q5TCQ9 1506 aa23.37■■□□□ 1.33
PCDHGA11-202ENST00000518882 UGGT2Q9NYU1 1516 aa23.36■■□□□ 1.33
PCDHGA11-202ENST00000518882 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
PCDHGA11-202ENST00000518882 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.32
PCDHGA11-202ENST00000518882 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
PCDHGA11-202ENST00000518882 DENND4BO75064 1496 aaPredicted RBP23.28■■□□□ 1.32
PCDHGA11-202ENST00000518882 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
PCDHGA11-202ENST00000518882 KDM6BO15054 1643 aa23.26■■□□□ 1.31
PCDHGA11-202ENST00000518882 HECW1Q76N89 1606 aa23.25■■□□□ 1.31
PCDHGA11-202ENST00000518882 TCOF1Q13428 1488 aaKnown RBP23.25■■□□□ 1.31
PCDHGA11-202ENST00000518882 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
PCDHGA11-202ENST00000518882 NEFLP07196 543 aa23.25■■□□□ 1.31
PCDHGA11-202ENST00000518882 CHIC2Q9UKJ5 165 aa23.24■■□□□ 1.31
PCDHGA11-202ENST00000518882 PDS5BQ9NTI5 1447 aa23.21■■□□□ 1.31
PCDHGA11-202ENST00000518882 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
PCDHGA11-202ENST00000518882 WASHC2AQ641Q2 1341 aa23.18■■□□□ 1.3
PCDHGA11-202ENST00000518882 EPRSP07814 1512 aaKnown RBP23.17■■□□□ 1.3
PCDHGA11-202ENST00000518882 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
PCDHGA11-202ENST00000518882 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
PCDHGA11-202ENST00000518882 CDK13Q14004 1512 aaKnown RBP23.16■■□□□ 1.3
PCDHGA11-202ENST00000518882 IQGAP2Q13576 1575 aa23.15■■□□□ 1.3
PCDHGA11-202ENST00000518882 ANP32EQ9BTT0 268 aa23.15■■□□□ 1.3
PCDHGA11-202ENST00000518882 AKNAQ7Z591 1439 aa23.15■■□□□ 1.3
PCDHGA11-202ENST00000518882 WDR62O43379 1518 aa23.1■■□□□ 1.29
PCDHGA11-202ENST00000518882 HNRNPUQ00839 825 aaKnown RBP eCLIP23.1■■□□□ 1.29
PCDHGA11-202ENST00000518882 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
PCDHGA11-202ENST00000518882 MPHOSPH9Q99550 1183 aa23.09■■□□□ 1.29
PCDHGA11-202ENST00000518882 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
PCDHGA11-202ENST00000518882 RBM19Q9Y4C8 960 aaKnown RBP23.08■■□□□ 1.29
PCDHGA11-202ENST00000518882 ARID3CA6NKF2 412 aa23.08■■□□□ 1.29
PCDHGA11-202ENST00000518882 FOXD1Q16676 465 aa23.07■■□□□ 1.28
PCDHGA11-202ENST00000518882 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
PCDHGA11-202ENST00000518882 L3MBTL2Q969R5 705 aa23.05■■□□□ 1.28
PCDHGA11-202ENST00000518882 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
PCDHGA11-202ENST00000518882 C11orf95C9JLR9 678 aaPredicted RBP23.02■■□□□ 1.28
PCDHGA11-202ENST00000518882 CCDC184Q52MB2 194 aa23.01■■□□□ 1.27
PCDHGA11-202ENST00000518882 DAPK1P53355 1430 aa22.99■■□□□ 1.27
PCDHGA11-202ENST00000518882 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms