RNA–Protein interactions for RNA: ENST00000518136.3

HOXA13-202, Transcript of homeobox A13, humanhuman

TSL 2

Gene HOXA13, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-202ENST00000518136 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
HOXA13-202ENST00000518136 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
HOXA13-202ENST00000518136 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
HOXA13-202ENST00000518136 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
HOXA13-202ENST00000518136 CUX1P39880 1505 aa14.28□□□□□ -0.12
HOXA13-202ENST00000518136 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
HOXA13-202ENST00000518136 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
HOXA13-202ENST00000518136 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
HOXA13-202ENST00000518136 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
HOXA13-202ENST00000518136 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
HOXA13-202ENST00000518136 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
HOXA13-202ENST00000518136 URB2Q14146 1524 aaKnown RBP14.23□□□□□ -0.13
HOXA13-202ENST00000518136 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
HOXA13-202ENST00000518136 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.14
HOXA13-202ENST00000518136 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
HOXA13-202ENST00000518136 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
HOXA13-202ENST00000518136 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
HOXA13-202ENST00000518136 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
HOXA13-202ENST00000518136 WDR62O43379 1518 aa14.16□□□□□ -0.14
HOXA13-202ENST00000518136 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
HOXA13-202ENST00000518136 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
HOXA13-202ENST00000518136 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
HOXA13-202ENST00000518136 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
HOXA13-202ENST00000518136 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
HOXA13-202ENST00000518136 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
HOXA13-202ENST00000518136 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
HOXA13-202ENST00000518136 CUX2O14529 1486 aa14.06□□□□□ -0.16
HOXA13-202ENST00000518136 PRR29P0C7W0 189 aa14.05□□□□□ -0.16
HOXA13-202ENST00000518136 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
HOXA13-202ENST00000518136 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
HOXA13-202ENST00000518136 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
HOXA13-202ENST00000518136 SOGA1O94964 1423 aa14□□□□□ -0.17
HOXA13-202ENST00000518136 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
HOXA13-202ENST00000518136 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
HOXA13-202ENST00000518136 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
HOXA13-202ENST00000518136 MIER1Q8N108 512 aa13.97□□□□□ -0.17
HOXA13-202ENST00000518136 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
HOXA13-202ENST00000518136 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
HOXA13-202ENST00000518136 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
HOXA13-202ENST00000518136 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
HOXA13-202ENST00000518136 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
HOXA13-202ENST00000518136 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
HOXA13-202ENST00000518136 EEA1Q15075 1411 aa13.86□□□□□ -0.19
HOXA13-202ENST00000518136 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
HOXA13-202ENST00000518136 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
HOXA13-202ENST00000518136 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
HOXA13-202ENST00000518136 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
HOXA13-202ENST00000518136 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.19
HOXA13-202ENST00000518136 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
HOXA13-202ENST00000518136 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
HOXA13-202ENST00000518136 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
HOXA13-202ENST00000518136 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
HOXA13-202ENST00000518136 KIF21BO75037 1637 aa13.82□□□□□ -0.2
HOXA13-202ENST00000518136 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
HOXA13-202ENST00000518136 IGF1RP08069 1367 aa13.81□□□□□ -0.2
HOXA13-202ENST00000518136 CUL7Q14999 1698 aa13.8□□□□□ -0.2
HOXA13-202ENST00000518136 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
HOXA13-202ENST00000518136 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
HOXA13-202ENST00000518136 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
HOXA13-202ENST00000518136 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
HOXA13-202ENST00000518136 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
HOXA13-202ENST00000518136 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
HOXA13-202ENST00000518136 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
HOXA13-202ENST00000518136 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
HOXA13-202ENST00000518136 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
HOXA13-202ENST00000518136 CHD1O14646 1710 aa13.72□□□□□ -0.21
HOXA13-202ENST00000518136 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
HOXA13-202ENST00000518136 CARMIL1Q5VZK9 1371 aa13.7□□□□□ -0.22
HOXA13-202ENST00000518136 GOLGA3Q08378 1498 aa13.69□□□□□ -0.22
HOXA13-202ENST00000518136 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
HOXA13-202ENST00000518136 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
HOXA13-202ENST00000518136 SPOCK2Q92563 424 aa13.68□□□□□ -0.22
HOXA13-202ENST00000518136 CTTNBP2Q8WZ74 1663 aa13.68□□□□□ -0.22
HOXA13-202ENST00000518136 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
HOXA13-202ENST00000518136 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
HOXA13-202ENST00000518136 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
HOXA13-202ENST00000518136 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
HOXA13-202ENST00000518136 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
HOXA13-202ENST00000518136 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
HOXA13-202ENST00000518136 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
HOXA13-202ENST00000518136 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
HOXA13-202ENST00000518136 NUP160Q12769 1436 aa13.56□□□□□ -0.24
HOXA13-202ENST00000518136 NUBP1P53384 320 aa13.55□□□□□ -0.24
HOXA13-202ENST00000518136 IQGAP2Q13576 1575 aa13.53□□□□□ -0.24
HOXA13-202ENST00000518136 CEP162Q5TB80 1403 aa13.52□□□□□ -0.25
HOXA13-202ENST00000518136 CLASP1Q7Z460 1538 aa13.51□□□□□ -0.25
HOXA13-202ENST00000518136 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
HOXA13-202ENST00000518136 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
HOXA13-202ENST00000518136 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
HOXA13-202ENST00000518136 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
HOXA13-202ENST00000518136 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
HOXA13-202ENST00000518136 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
HOXA13-202ENST00000518136 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
HOXA13-202ENST00000518136 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
HOXA13-202ENST00000518136 CHMP7Q8WUX9 453 aaPredicted RBP13.48□□□□□ -0.25
HOXA13-202ENST00000518136 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
HOXA13-202ENST00000518136 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.25
HOXA13-202ENST00000518136 POTEHQ6S545 545 aa13.46□□□□□ -0.25
HOXA13-202ENST00000518136 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
HOXA13-202ENST00000518136 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms