RNA–Protein interactions for RNA: ENST00000518136.3

HOXA13-202, Transcript of homeobox A13, humanhuman

TSL 2

Gene HOXA13, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-202ENST00000518136 AEBP2Q6ZN18 517 aaPredicted RBP25.84■■□□□ 1.73
HOXA13-202ENST00000518136 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
HOXA13-202ENST00000518136 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
HOXA13-202ENST00000518136 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
HOXA13-202ENST00000518136 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
HOXA13-202ENST00000518136 FOXD1Q16676 465 aa20.35■□□□□ 0.85
HOXA13-202ENST00000518136 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
HOXA13-202ENST00000518136 ADRA2BP18089 450 aa19.63■□□□□ 0.73
HOXA13-202ENST00000518136 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
HOXA13-202ENST00000518136 PIAS4Q8N2W9 510 aaPredicted RBP19.22■□□□□ 0.67
HOXA13-202ENST00000518136 MSH5O43196 834 aa18.75■□□□□ 0.59
HOXA13-202ENST00000518136 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
HOXA13-202ENST00000518136 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
HOXA13-202ENST00000518136 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
HOXA13-202ENST00000518136 KCNA4P22459 653 aa17.79■□□□□ 0.44
HOXA13-202ENST00000518136 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
HOXA13-202ENST00000518136 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
HOXA13-202ENST00000518136 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
HOXA13-202ENST00000518136 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
HOXA13-202ENST00000518136 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.38
HOXA13-202ENST00000518136 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
HOXA13-202ENST00000518136 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
HOXA13-202ENST00000518136 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
HOXA13-202ENST00000518136 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
HOXA13-202ENST00000518136 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
HOXA13-202ENST00000518136 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
HOXA13-202ENST00000518136 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
HOXA13-202ENST00000518136 ABCC9O60706 1549 aa16.55■□□□□ 0.24
HOXA13-202ENST00000518136 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
HOXA13-202ENST00000518136 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
HOXA13-202ENST00000518136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.22
HOXA13-202ENST00000518136 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
HOXA13-202ENST00000518136 ZBTB22O15209 634 aa16.35■□□□□ 0.21
HOXA13-202ENST00000518136 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
HOXA13-202ENST00000518136 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
HOXA13-202ENST00000518136 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
HOXA13-202ENST00000518136 NACADO15069 1562 aa16.17■□□□□ 0.18
HOXA13-202ENST00000518136 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
HOXA13-202ENST00000518136 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
HOXA13-202ENST00000518136 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
HOXA13-202ENST00000518136 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
HOXA13-202ENST00000518136 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
HOXA13-202ENST00000518136 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
HOXA13-202ENST00000518136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
HOXA13-202ENST00000518136 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
HOXA13-202ENST00000518136 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
HOXA13-202ENST00000518136 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
HOXA13-202ENST00000518136 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
HOXA13-202ENST00000518136 SHROOM4Q9ULL8 1493 aa15.79■□□□□ 0.12
HOXA13-202ENST00000518136 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
HOXA13-202ENST00000518136 APLP2Q06481 763 aa15.78■□□□□ 0.12
HOXA13-202ENST00000518136 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
HOXA13-202ENST00000518136 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
HOXA13-202ENST00000518136 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
HOXA13-202ENST00000518136 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
HOXA13-202ENST00000518136 CAPN15O75808 1086 aa15.62■□□□□ 0.09
HOXA13-202ENST00000518136 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
HOXA13-202ENST00000518136 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
HOXA13-202ENST00000518136 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
HOXA13-202ENST00000518136 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
HOXA13-202ENST00000518136 ABCB7O75027 752 aa15.32■□□□□ 0.04
HOXA13-202ENST00000518136 POLA2Q14181 598 aa15.32■□□□□ 0.04
HOXA13-202ENST00000518136 DSG3P32926 999 aa15.31■□□□□ 0.04
HOXA13-202ENST00000518136 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
HOXA13-202ENST00000518136 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
HOXA13-202ENST00000518136 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
HOXA13-202ENST00000518136 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
HOXA13-202ENST00000518136 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
HOXA13-202ENST00000518136 WIZO95785 1651 aa15.15■□□□□ 0.02
HOXA13-202ENST00000518136 PEG3Q9GZU2 1588 aa15.08■□□□□ 0
HOXA13-202ENST00000518136 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
HOXA13-202ENST00000518136 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
HOXA13-202ENST00000518136 FBLN2P98095 1184 aa15.04■□□□□ -0
HOXA13-202ENST00000518136 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
HOXA13-202ENST00000518136 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
HOXA13-202ENST00000518136 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
HOXA13-202ENST00000518136 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
HOXA13-202ENST00000518136 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
HOXA13-202ENST00000518136 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
HOXA13-202ENST00000518136 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
HOXA13-202ENST00000518136 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
HOXA13-202ENST00000518136 FKBP8Q14318 412 aa14.78□□□□□ -0.04
HOXA13-202ENST00000518136 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
HOXA13-202ENST00000518136 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
HOXA13-202ENST00000518136 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
HOXA13-202ENST00000518136 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
HOXA13-202ENST00000518136 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
HOXA13-202ENST00000518136 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
HOXA13-202ENST00000518136 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
HOXA13-202ENST00000518136 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
HOXA13-202ENST00000518136 PRDM2Q13029 1718 aa14.6□□□□□ -0.07
HOXA13-202ENST00000518136 NESP48681 1621 aa14.52□□□□□ -0.09
HOXA13-202ENST00000518136 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
HOXA13-202ENST00000518136 CFTRP13569 1480 aa14.5□□□□□ -0.09
HOXA13-202ENST00000518136 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
HOXA13-202ENST00000518136 CADPSQ9ULU8 1353 aa14.46□□□□□ -0.1
HOXA13-202ENST00000518136 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
HOXA13-202ENST00000518136 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
HOXA13-202ENST00000518136 PROM2Q8N271 834 aa14.41□□□□□ -0.1
HOXA13-202ENST00000518136 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms