RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
UBE2D3-232ENST00000514755 CHD1O14646 1710 aa19.15■□□□□ 0.66
UBE2D3-232ENST00000514755 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
UBE2D3-232ENST00000514755 U3KPZ7 1027 aaPredicted RBP19.14■□□□□ 0.65
UBE2D3-232ENST00000514755 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
UBE2D3-232ENST00000514755 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
UBE2D3-232ENST00000514755 FBLN2P98095 1184 aa19.11■□□□□ 0.65
UBE2D3-232ENST00000514755 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
UBE2D3-232ENST00000514755 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
UBE2D3-232ENST00000514755 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
UBE2D3-232ENST00000514755 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
UBE2D3-232ENST00000514755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.97■□□□□ 0.63
UBE2D3-232ENST00000514755 HNRNPUL2Q1KMD3 747 aaKnown RBP18.97■□□□□ 0.63
UBE2D3-232ENST00000514755 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
UBE2D3-232ENST00000514755 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
UBE2D3-232ENST00000514755 RIMBP3CA6NJZ7 1639 aa18.94■□□□□ 0.62
UBE2D3-232ENST00000514755 RIMBP3BA6NNM3 1639 aa18.94■□□□□ 0.62
UBE2D3-232ENST00000514755 RIMBP3Q9UFD9 1639 aa18.94■□□□□ 0.62
UBE2D3-232ENST00000514755 ATXN8OSP0DMR3 200 aa18.94■□□□□ 0.62
UBE2D3-232ENST00000514755 CLASP1Q7Z460 1538 aa18.93■□□□□ 0.62
UBE2D3-232ENST00000514755 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
UBE2D3-232ENST00000514755 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
UBE2D3-232ENST00000514755 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
UBE2D3-232ENST00000514755 SAMD1Q6SPF0 538 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-232ENST00000514755 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
UBE2D3-232ENST00000514755 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
UBE2D3-232ENST00000514755 IGF1RP08069 1367 aa18.86■□□□□ 0.61
UBE2D3-232ENST00000514755 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
UBE2D3-232ENST00000514755 NUP160Q12769 1436 aa18.83■□□□□ 0.61
UBE2D3-232ENST00000514755 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
UBE2D3-232ENST00000514755 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
UBE2D3-232ENST00000514755 CUL7Q14999 1698 aa18.76■□□□□ 0.59
UBE2D3-232ENST00000514755 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
UBE2D3-232ENST00000514755 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
UBE2D3-232ENST00000514755 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
UBE2D3-232ENST00000514755 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
UBE2D3-232ENST00000514755 APLP2Q06481 763 aa18.72■□□□□ 0.59
UBE2D3-232ENST00000514755 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
UBE2D3-232ENST00000514755 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
UBE2D3-232ENST00000514755 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
UBE2D3-232ENST00000514755 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
UBE2D3-232ENST00000514755 KIAA0586Q9BVV6 1533 aa18.62■□□□□ 0.57
UBE2D3-232ENST00000514755 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
UBE2D3-232ENST00000514755 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
UBE2D3-232ENST00000514755 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-232ENST00000514755 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
UBE2D3-232ENST00000514755 FAM9AQ8IZU1 332 aaPredicted RBP18.5■□□□□ 0.55
UBE2D3-232ENST00000514755 EEA1Q15075 1411 aa18.45■□□□□ 0.54
UBE2D3-232ENST00000514755 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
UBE2D3-232ENST00000514755 ZNF219Q9P2Y4 722 aaPredicted RBP18.43■□□□□ 0.54
UBE2D3-232ENST00000514755 DISP1Q96F81 1524 aa18.43■□□□□ 0.54
UBE2D3-232ENST00000514755 UGGT2Q9NYU1 1516 aa18.41■□□□□ 0.54
UBE2D3-232ENST00000514755 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
UBE2D3-232ENST00000514755 CAPN15O75808 1086 aa18.39■□□□□ 0.53
UBE2D3-232ENST00000514755 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
UBE2D3-232ENST00000514755 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
UBE2D3-232ENST00000514755 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
UBE2D3-232ENST00000514755 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
UBE2D3-232ENST00000514755 PTPRGP23470 1445 aa18.36■□□□□ 0.53
UBE2D3-232ENST00000514755 ADCY10Q96PN6 1610 aa18.36■□□□□ 0.53
UBE2D3-232ENST00000514755 KIF21BO75037 1637 aa18.31■□□□□ 0.52
UBE2D3-232ENST00000514755 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-232ENST00000514755 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
UBE2D3-232ENST00000514755 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
UBE2D3-232ENST00000514755 P3H3Q8IVL6 736 aa18.25■□□□□ 0.51
UBE2D3-232ENST00000514755 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-232ENST00000514755 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
UBE2D3-232ENST00000514755 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
UBE2D3-232ENST00000514755 ABCC2Q92887 1545 aa18.22■□□□□ 0.51
UBE2D3-232ENST00000514755 SAMD9Q5K651 1589 aa18.21■□□□□ 0.51
UBE2D3-232ENST00000514755 PLB1Q6P1J6 1458 aa18.21■□□□□ 0.51
UBE2D3-232ENST00000514755 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
UBE2D3-232ENST00000514755 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
UBE2D3-232ENST00000514755 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
UBE2D3-232ENST00000514755 ABCA8O94911 1581 aa18.17■□□□□ 0.5
UBE2D3-232ENST00000514755 ABCC10Q5T3U5 1492 aa18.15■□□□□ 0.5
UBE2D3-232ENST00000514755 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
UBE2D3-232ENST00000514755 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
UBE2D3-232ENST00000514755 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
UBE2D3-232ENST00000514755 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-232ENST00000514755 FAM69CQ0P6D2 419 aa18.13■□□□□ 0.49
UBE2D3-232ENST00000514755 POLA2Q14181 598 aa18.12■□□□□ 0.49
UBE2D3-232ENST00000514755 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
UBE2D3-232ENST00000514755 DSG3P32926 999 aa18.11■□□□□ 0.49
UBE2D3-232ENST00000514755 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.48
UBE2D3-232ENST00000514755 ARID3CA6NKF2 412 aa18.07■□□□□ 0.48
UBE2D3-232ENST00000514755 ABCB7O75027 752 aa18.06■□□□□ 0.48
UBE2D3-232ENST00000514755 ARHGAP35Q9NRY4 1499 aa18.05■□□□□ 0.48
UBE2D3-232ENST00000514755 RAPGEF6Q8TEU7 1601 aa18.05■□□□□ 0.48
UBE2D3-232ENST00000514755 ATP10BO94823 1461 aa18.02■□□□□ 0.48
UBE2D3-232ENST00000514755 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.47
UBE2D3-232ENST00000514755 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
UBE2D3-232ENST00000514755 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
UBE2D3-232ENST00000514755 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
UBE2D3-232ENST00000514755 GLI2P10070 1586 aa18■□□□□ 0.47
UBE2D3-232ENST00000514755 PPRC1Q5VV67 1664 aaKnown RBP17.96■□□□□ 0.47
UBE2D3-232ENST00000514755 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
UBE2D3-232ENST00000514755 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
UBE2D3-232ENST00000514755 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-232ENST00000514755 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms