RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
PDPN-209ENST00000510906 SOGA1O94964 1423 aa15.31■□□□□ 0.04
PDPN-209ENST00000510906 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
PDPN-209ENST00000510906 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
PDPN-209ENST00000510906 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
PDPN-209ENST00000510906 SPINK5Q9NQ38 1064 aaPredicted RBP15.21■□□□□ 0.03
PDPN-209ENST00000510906 FBLN2P98095 1184 aa15.19■□□□□ 0.02
PDPN-209ENST00000510906 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
PDPN-209ENST00000510906 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
PDPN-209ENST00000510906 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
PDPN-209ENST00000510906 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
PDPN-209ENST00000510906 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
PDPN-209ENST00000510906 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.02
PDPN-209ENST00000510906 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
PDPN-209ENST00000510906 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
PDPN-209ENST00000510906 CHD1O14646 1710 aa15.14■□□□□ 0.01
PDPN-209ENST00000510906 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
PDPN-209ENST00000510906 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
PDPN-209ENST00000510906 GAPVD1Q14C86 1478 aa15.12■□□□□ 0.01
PDPN-209ENST00000510906 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
PDPN-209ENST00000510906 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
PDPN-209ENST00000510906 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
PDPN-209ENST00000510906 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
PDPN-209ENST00000510906 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
PDPN-209ENST00000510906 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
PDPN-209ENST00000510906 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
PDPN-209ENST00000510906 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
PDPN-209ENST00000510906 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
PDPN-209ENST00000510906 ABCA5Q8WWZ7 1642 aa15.07■□□□□ 0
PDPN-209ENST00000510906 SYNJ2O15056 1496 aa15.07■□□□□ 0
PDPN-209ENST00000510906 CAPN15O75808 1086 aa15.05■□□□□ -0
PDPN-209ENST00000510906 POLA2Q14181 598 aa15.05■□□□□ -0
PDPN-209ENST00000510906 PBRM1Q86U86 1689 aa15.04■□□□□ -0
PDPN-209ENST00000510906 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
PDPN-209ENST00000510906 CLASP1Q7Z460 1538 aa15.02□□□□□ -0.01
PDPN-209ENST00000510906 CYB5RLQ6IPT4 315 aa15□□□□□ -0.01
PDPN-209ENST00000510906 PROM2Q8N271 834 aa14.99□□□□□ -0.01
PDPN-209ENST00000510906 ARAP1Q96P48 1450 aa14.98□□□□□ -0.01
PDPN-209ENST00000510906 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
PDPN-209ENST00000510906 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
PDPN-209ENST00000510906 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
PDPN-209ENST00000510906 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
PDPN-209ENST00000510906 NUP160Q12769 1436 aa14.9□□□□□ -0.02
PDPN-209ENST00000510906 CEP170Q5SW79 1584 aa14.89□□□□□ -0.03
PDPN-209ENST00000510906 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
PDPN-209ENST00000510906 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
PDPN-209ENST00000510906 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
PDPN-209ENST00000510906 IGF1RP08069 1367 aa14.84□□□□□ -0.03
PDPN-209ENST00000510906 ABCB7O75027 752 aa14.83□□□□□ -0.04
PDPN-209ENST00000510906 ERCC6L2Q5T890 1561 aa14.82□□□□□ -0.04
PDPN-209ENST00000510906 SHROOM2Q13796 1616 aa14.77□□□□□ -0.04
PDPN-209ENST00000510906 DSG3P32926 999 aa14.77□□□□□ -0.05
PDPN-209ENST00000510906 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
PDPN-209ENST00000510906 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
PDPN-209ENST00000510906 RUSC2Q8N2Y8 1516 aa14.74□□□□□ -0.05
PDPN-209ENST00000510906 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
PDPN-209ENST00000510906 CUL7Q14999 1698 aa14.73□□□□□ -0.05
PDPN-209ENST00000510906 KIAA0586Q9BVV6 1533 aa14.7□□□□□ -0.06
PDPN-209ENST00000510906 VASPP50552 380 aaPredicted RBP14.67□□□□□ -0.06
PDPN-209ENST00000510906 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
PDPN-209ENST00000510906 RAPGEF2Q9Y4G8 1499 aa14.61□□□□□ -0.07
PDPN-209ENST00000510906 IQGAP2Q13576 1575 aa14.56□□□□□ -0.08
PDPN-209ENST00000510906 TTBK1Q5TCY1 1321 aaPredicted RBP14.55□□□□□ -0.08
PDPN-209ENST00000510906 PTPRGP23470 1445 aa14.54□□□□□ -0.08
PDPN-209ENST00000510906 CARMIL2Q6F5E8 1435 aa14.54□□□□□ -0.08
PDPN-209ENST00000510906 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
PDPN-209ENST00000510906 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
PDPN-209ENST00000510906 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
PDPN-209ENST00000510906 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
PDPN-209ENST00000510906 IFNLR1Q8IU57 520 aaPredicted RBP14.53□□□□□ -0.08
PDPN-209ENST00000510906 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
PDPN-209ENST00000510906 ADCY10Q96PN6 1610 aa14.52□□□□□ -0.08
PDPN-209ENST00000510906 NPM1P06748 294 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDPN-209ENST00000510906 DISP1Q96F81 1524 aa14.51□□□□□ -0.09
PDPN-209ENST00000510906 PRXQ9BXM0 1461 aa14.51□□□□□ -0.09
PDPN-209ENST00000510906 ZNF692Q9BU19 519 aaPredicted RBP14.5□□□□□ -0.09
PDPN-209ENST00000510906 UGGT2Q9NYU1 1516 aa14.5□□□□□ -0.09
PDPN-209ENST00000510906 KDM4FA0A1W2PPD8 638 aa14.48□□□□□ -0.09
PDPN-209ENST00000510906 MAPKBP1O60336 1514 aa14.46□□□□□ -0.09
PDPN-209ENST00000510906 FAM69CQ0P6D2 419 aa14.45□□□□□ -0.1
PDPN-209ENST00000510906 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
PDPN-209ENST00000510906 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
PDPN-209ENST00000510906 UACAQ9BZF9 1416 aa14.42□□□□□ -0.1
PDPN-209ENST00000510906 ABCC2Q92887 1545 aa14.42□□□□□ -0.1
PDPN-209ENST00000510906 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
PDPN-209ENST00000510906 KIF13AQ9H1H9 1805 aa14.41□□□□□ -0.1
PDPN-209ENST00000510906 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
PDPN-209ENST00000510906 CTTNBP2Q8WZ74 1663 aa14.41□□□□□ -0.1
PDPN-209ENST00000510906 DIP2BQ9P265 1576 aa14.4□□□□□ -0.1
PDPN-209ENST00000510906 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
PDPN-209ENST00000510906 EEA1Q15075 1411 aa14.4□□□□□ -0.1
PDPN-209ENST00000510906 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
PDPN-209ENST00000510906 ASXL2Q76L83 1435 aa14.37□□□□□ -0.11
PDPN-209ENST00000510906 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
PDPN-209ENST00000510906 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
PDPN-209ENST00000510906 KDM5BQ9UGL1 1544 aa14.35□□□□□ -0.11
PDPN-209ENST00000510906 LMTK3Q96Q04 1460 aa14.34□□□□□ -0.11
PDPN-209ENST00000510906 SOCS7O14512 581 aa14.34□□□□□ -0.11
PDPN-209ENST00000510906 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
PDPN-209ENST00000510906 FBXO41Q8TF61 875 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms