RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
PRDM5-207ENST00000505484 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
PRDM5-207ENST00000505484 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
PRDM5-207ENST00000505484 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
PRDM5-207ENST00000505484 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
PRDM5-207ENST00000505484 ERICH3Q5RHP9 1530 aa22.53■■□□□ 1.2
PRDM5-207ENST00000505484 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
PRDM5-207ENST00000505484 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
PRDM5-207ENST00000505484 CCER2I3L3R5 266 aa22.49■■□□□ 1.19
PRDM5-207ENST00000505484 KANK4Q5T7N3 995 aaPredicted RBP22.49■■□□□ 1.19
PRDM5-207ENST00000505484 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
PRDM5-207ENST00000505484 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
PRDM5-207ENST00000505484 MAPKBP1O60336 1514 aa22.46■■□□□ 1.19
PRDM5-207ENST00000505484 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
PRDM5-207ENST00000505484 PRXQ9BXM0 1461 aa22.43■■□□□ 1.18
PRDM5-207ENST00000505484 MSH5O43196 834 aa22.43■■□□□ 1.18
PRDM5-207ENST00000505484 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
PRDM5-207ENST00000505484 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
PRDM5-207ENST00000505484 DDX10Q13206 875 aaKnown RBP22.41■■□□□ 1.18
PRDM5-207ENST00000505484 MYT1LQ9UL68 1186 aa22.41■■□□□ 1.18
PRDM5-207ENST00000505484 TIMELESSQ9UNS1 1208 aa22.39■■□□□ 1.17
PRDM5-207ENST00000505484 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.17
PRDM5-207ENST00000505484 IGF1RP08069 1367 aa22.38■■□□□ 1.17
PRDM5-207ENST00000505484 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
PRDM5-207ENST00000505484 WDR97A6NE52 1622 aa22.34■■□□□ 1.17
PRDM5-207ENST00000505484 ITGAEP38570 1179 aa22.33■■□□□ 1.16
PRDM5-207ENST00000505484 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
PRDM5-207ENST00000505484 ANP32CO43423 234 aa22.31■■□□□ 1.16
PRDM5-207ENST00000505484 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
PRDM5-207ENST00000505484 ERICH6Q7L0X2 663 aa22.28■■□□□ 1.16
PRDM5-207ENST00000505484 TRIM52Q96A61 297 aa22.27■■□□□ 1.16
PRDM5-207ENST00000505484 CDK11AQ9UQ88 783 aaPredicted RBP22.27■■□□□ 1.16
PRDM5-207ENST00000505484 AQRO60306 1485 aaKnown RBP eCLIP22.25■■□□□ 1.15
PRDM5-207ENST00000505484 CARMIL1Q5VZK9 1371 aa22.25■■□□□ 1.15
PRDM5-207ENST00000505484 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
PRDM5-207ENST00000505484 ERICH6BQ5W0A0 696 aa22.23■■□□□ 1.15
PRDM5-207ENST00000505484 ZNF608Q9ULD9 1512 aaPredicted RBP22.22■■□□□ 1.15
PRDM5-207ENST00000505484 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
PRDM5-207ENST00000505484 WDR62O43379 1518 aa22.21■■□□□ 1.15
PRDM5-207ENST00000505484 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
PRDM5-207ENST00000505484 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
PRDM5-207ENST00000505484 GAPVD1Q14C86 1478 aa22.18■■□□□ 1.14
PRDM5-207ENST00000505484 SIN3AQ96ST3 1273 aa22.15■■□□□ 1.14
PRDM5-207ENST00000505484 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
PRDM5-207ENST00000505484 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
PRDM5-207ENST00000505484 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
PRDM5-207ENST00000505484 DEKP35659 375 aaKnown RBP22.05■■□□□ 1.12
PRDM5-207ENST00000505484 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
PRDM5-207ENST00000505484 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
PRDM5-207ENST00000505484 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
PRDM5-207ENST00000505484 PRKCSHP14314 528 aaPredicted RBP22.02■■□□□ 1.12
PRDM5-207ENST00000505484 HNRNPUQ00839 825 aaKnown RBP eCLIP22.01■■□□□ 1.11
PRDM5-207ENST00000505484 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
PRDM5-207ENST00000505484 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
PRDM5-207ENST00000505484 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
PRDM5-207ENST00000505484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.98■■□□□ 1.11
PRDM5-207ENST00000505484 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
PRDM5-207ENST00000505484 FBLN2P98095 1184 aa21.96■■□□□ 1.11
PRDM5-207ENST00000505484 CUL7Q14999 1698 aa21.96■■□□□ 1.11
PRDM5-207ENST00000505484 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
PRDM5-207ENST00000505484 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
PRDM5-207ENST00000505484 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
PRDM5-207ENST00000505484 FAM50AQ14320 339 aaKnown RBP21.92■■□□□ 1.1
PRDM5-207ENST00000505484 SNAPC4Q5SXM2 1469 aa21.92■■□□□ 1.1
PRDM5-207ENST00000505484 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
PRDM5-207ENST00000505484 CFAP43Q8NDM7 1665 aa21.9■■□□□ 1.1
PRDM5-207ENST00000505484 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
PRDM5-207ENST00000505484 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
PRDM5-207ENST00000505484 FHOD3Q2V2M9 1422 aa21.83■■□□□ 1.08
PRDM5-207ENST00000505484 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
PRDM5-207ENST00000505484 ATP1B4Q9UN42 357 aaPredicted RBP21.81■■□□□ 1.08
PRDM5-207ENST00000505484 UACAQ9BZF9 1416 aa21.81■■□□□ 1.08
PRDM5-207ENST00000505484 CTTNBP2Q8WZ74 1663 aa21.79■■□□□ 1.08
PRDM5-207ENST00000505484 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
PRDM5-207ENST00000505484 CCDC18Q5T9S5 1454 aa21.76■■□□□ 1.07
PRDM5-207ENST00000505484 ZBED9Q6R2W3 1325 aa21.76■■□□□ 1.07
PRDM5-207ENST00000505484 B4GALNT3Q6L9W6 998 aa21.76■■□□□ 1.07
PRDM5-207ENST00000505484 KDM5BQ9UGL1 1544 aa21.76■■□□□ 1.07
PRDM5-207ENST00000505484 HFM1A2PYH4 1435 aa21.74■■□□□ 1.07
PRDM5-207ENST00000505484 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
PRDM5-207ENST00000505484 WASHC2AQ641Q2 1341 aa21.73■■□□□ 1.07
PRDM5-207ENST00000505484 CNTLNQ9NXG0 1405 aa21.72■■□□□ 1.07
PRDM5-207ENST00000505484 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
PRDM5-207ENST00000505484 PAK3O75914 559 aaPredicted RBP21.72■■□□□ 1.07
PRDM5-207ENST00000505484 NBR1Q14596 966 aa21.7■■□□□ 1.07
PRDM5-207ENST00000505484 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
PRDM5-207ENST00000505484 IPO9Q96P70 1041 aaKnown RBP21.68■■□□□ 1.06
PRDM5-207ENST00000505484 MAGI1Q96QZ7 1491 aaPredicted RBP21.68■■□□□ 1.06
PRDM5-207ENST00000505484 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
PRDM5-207ENST00000505484 ANP32AP39687 249 aaKnown RBP21.67■■□□□ 1.06
PRDM5-207ENST00000505484 PTPN23Q9H3S7 1636 aa21.67■■□□□ 1.06
PRDM5-207ENST00000505484 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
PRDM5-207ENST00000505484 ARID3CA6NKF2 412 aa21.67■■□□□ 1.06
PRDM5-207ENST00000505484 RTL5Q5HYW3 569 aaPredicted RBP21.67■■□□□ 1.06
PRDM5-207ENST00000505484 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
PRDM5-207ENST00000505484 CASKIN1Q8WXD9 1431 aa21.64■■□□□ 1.06
PRDM5-207ENST00000505484 PRKRIP1Q9H875 184 aaPredicted RBP21.64■■□□□ 1.05
PRDM5-207ENST00000505484 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
PRDM5-207ENST00000505484 IQGAP2Q13576 1575 aa21.63■■□□□ 1.05
PRDM5-207ENST00000505484 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms