RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
PRDM5-207ENST00000505484 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
PRDM5-207ENST00000505484 HRCP23327 699 aa26.86■■□□□ 1.89
PRDM5-207ENST00000505484 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
PRDM5-207ENST00000505484 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
PRDM5-207ENST00000505484 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
PRDM5-207ENST00000505484 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
PRDM5-207ENST00000505484 ABCC9O60706 1549 aa26.31■■□□□ 1.8
PRDM5-207ENST00000505484 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
PRDM5-207ENST00000505484 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.78
PRDM5-207ENST00000505484 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
PRDM5-207ENST00000505484 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
PRDM5-207ENST00000505484 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
PRDM5-207ENST00000505484 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
PRDM5-207ENST00000505484 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
PRDM5-207ENST00000505484 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
PRDM5-207ENST00000505484 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
PRDM5-207ENST00000505484 NACADO15069 1562 aa25.45■■□□□ 1.67
PRDM5-207ENST00000505484 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
PRDM5-207ENST00000505484 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
PRDM5-207ENST00000505484 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
PRDM5-207ENST00000505484 MYT1Q01538 1121 aa25.1■■□□□ 1.61
PRDM5-207ENST00000505484 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.59
PRDM5-207ENST00000505484 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
PRDM5-207ENST00000505484 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
PRDM5-207ENST00000505484 ACIN1Q9UKV3 1341 aaKnown RBP24.76■■□□□ 1.55
PRDM5-207ENST00000505484 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
PRDM5-207ENST00000505484 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
PRDM5-207ENST00000505484 NEUROD1Q13562 356 aa24.58■■□□□ 1.52
PRDM5-207ENST00000505484 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
PRDM5-207ENST00000505484 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
PRDM5-207ENST00000505484 CENPBP07199 599 aaPredicted RBP24.52■■□□□ 1.52
PRDM5-207ENST00000505484 GTF3C3Q9Y5Q9 886 aa24.44■■□□□ 1.5
PRDM5-207ENST00000505484 WIZO95785 1651 aa24.36■■□□□ 1.49
PRDM5-207ENST00000505484 DIEXFQ68CQ4 756 aaKnown RBP24.32■■□□□ 1.48
PRDM5-207ENST00000505484 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
PRDM5-207ENST00000505484 CCER1Q8TC90 406 aaPredicted RBP24.28■■□□□ 1.48
PRDM5-207ENST00000505484 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
PRDM5-207ENST00000505484 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
PRDM5-207ENST00000505484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.23■■□□□ 1.47
PRDM5-207ENST00000505484 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.43
PRDM5-207ENST00000505484 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
PRDM5-207ENST00000505484 ZNF316A6NFI3 1004 aaPredicted RBP23.94■■□□□ 1.42
PRDM5-207ENST00000505484 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
PRDM5-207ENST00000505484 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
PRDM5-207ENST00000505484 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
PRDM5-207ENST00000505484 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
PRDM5-207ENST00000505484 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
PRDM5-207ENST00000505484 BAZ1BQ9UIG0 1483 aaKnown RBP23.77■■□□□ 1.4
PRDM5-207ENST00000505484 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
PRDM5-207ENST00000505484 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
PRDM5-207ENST00000505484 CLSPNQ9HAW4 1339 aa23.66■■□□□ 1.38
PRDM5-207ENST00000505484 MIER1Q8N108 512 aa23.65■■□□□ 1.38
PRDM5-207ENST00000505484 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.37
PRDM5-207ENST00000505484 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
PRDM5-207ENST00000505484 TNIKQ9UKE5 1360 aa23.59■■□□□ 1.37
PRDM5-207ENST00000505484 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
PRDM5-207ENST00000505484 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
PRDM5-207ENST00000505484 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
PRDM5-207ENST00000505484 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
PRDM5-207ENST00000505484 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
PRDM5-207ENST00000505484 EEA1Q15075 1411 aa23.45■■□□□ 1.34
PRDM5-207ENST00000505484 SUPT16HQ9Y5B9 1047 aaKnown RBP23.35■■□□□ 1.33
PRDM5-207ENST00000505484 ANP32EQ9BTT0 268 aa23.32■■□□□ 1.32
PRDM5-207ENST00000505484 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
PRDM5-207ENST00000505484 SOGA1O94964 1423 aa23.29■■□□□ 1.32
PRDM5-207ENST00000505484 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
PRDM5-207ENST00000505484 TSHZ2Q9NRE2 1034 aa23.23■■□□□ 1.31
PRDM5-207ENST00000505484 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
PRDM5-207ENST00000505484 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
PRDM5-207ENST00000505484 NESP48681 1621 aa23.13■■□□□ 1.29
PRDM5-207ENST00000505484 BCL11AQ9H165 835 aa23.13■■□□□ 1.29
PRDM5-207ENST00000505484 CFTRP13569 1480 aa23.12■■□□□ 1.29
PRDM5-207ENST00000505484 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
PRDM5-207ENST00000505484 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
PRDM5-207ENST00000505484 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
PRDM5-207ENST00000505484 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
PRDM5-207ENST00000505484 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
PRDM5-207ENST00000505484 KIF21BO75037 1637 aa23.04■■□□□ 1.28
PRDM5-207ENST00000505484 CLIP1P30622 1438 aa23.02■■□□□ 1.28
PRDM5-207ENST00000505484 DHX57Q6P158 1386 aaKnown RBP22.97■■□□□ 1.27
PRDM5-207ENST00000505484 APLP2Q06481 763 aa22.96■■□□□ 1.27
PRDM5-207ENST00000505484 CUX1P39880 1505 aa22.9■■□□□ 1.26
PRDM5-207ENST00000505484 FANCD2Q9BXW9 1451 aa22.87■■□□□ 1.25
PRDM5-207ENST00000505484 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
PRDM5-207ENST00000505484 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
PRDM5-207ENST00000505484 CUX2O14529 1486 aa22.75■■□□□ 1.23
PRDM5-207ENST00000505484 BIVM-ERCC5R4GMW8 1640 aa22.74■■□□□ 1.23
PRDM5-207ENST00000505484 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
PRDM5-207ENST00000505484 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
PRDM5-207ENST00000505484 RAPGEF2Q9Y4G8 1499 aa22.69■■□□□ 1.22
PRDM5-207ENST00000505484 FKBP8Q14318 412 aa22.69■■□□□ 1.22
PRDM5-207ENST00000505484 RRBP1Q9P2E9 1410 aaKnown RBP22.68■■□□□ 1.22
PRDM5-207ENST00000505484 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
PRDM5-207ENST00000505484 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
PRDM5-207ENST00000505484 BCANQ96GW7 911 aa22.63■■□□□ 1.21
PRDM5-207ENST00000505484 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
PRDM5-207ENST00000505484 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
PRDM5-207ENST00000505484 NEFLP07196 543 aa22.62■■□□□ 1.21
PRDM5-207ENST00000505484 KCNH8Q96L42 1107 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms