RNA–Protein interactions for RNA: ENST00000505280.1

SEC24D-207, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 4

Gene SEC24D, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-207ENST00000505280 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
SEC24D-207ENST00000505280 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
SEC24D-207ENST00000505280 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.4
SEC24D-207ENST00000505280 TDRD9Q8NDG6 1382 aaKnown RBP17.57■□□□□ 0.4
SEC24D-207ENST00000505280 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
SEC24D-207ENST00000505280 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
SEC24D-207ENST00000505280 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
SEC24D-207ENST00000505280 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
SEC24D-207ENST00000505280 GRIN2BQ13224 1484 aa17.46■□□□□ 0.39
SEC24D-207ENST00000505280 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
SEC24D-207ENST00000505280 CAPN15O75808 1086 aa17.46■□□□□ 0.39
SEC24D-207ENST00000505280 APLP2Q06481 763 aa17.45■□□□□ 0.38
SEC24D-207ENST00000505280 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
SEC24D-207ENST00000505280 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
SEC24D-207ENST00000505280 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
SEC24D-207ENST00000505280 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
SEC24D-207ENST00000505280 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
SEC24D-207ENST00000505280 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
SEC24D-207ENST00000505280 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
SEC24D-207ENST00000505280 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
SEC24D-207ENST00000505280 SYNJ2O15056 1496 aa17.32■□□□□ 0.36
SEC24D-207ENST00000505280 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
SEC24D-207ENST00000505280 IGF1RP08069 1367 aa17.31■□□□□ 0.36
SEC24D-207ENST00000505280 CHD1O14646 1710 aa17.31■□□□□ 0.36
SEC24D-207ENST00000505280 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
SEC24D-207ENST00000505280 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
SEC24D-207ENST00000505280 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
SEC24D-207ENST00000505280 CUL7Q14999 1698 aa17.26■□□□□ 0.35
SEC24D-207ENST00000505280 FBLN2P98095 1184 aa17.25■□□□□ 0.35
SEC24D-207ENST00000505280 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
SEC24D-207ENST00000505280 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
SEC24D-207ENST00000505280 EEA1Q15075 1411 aa17.21■□□□□ 0.34
SEC24D-207ENST00000505280 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
SEC24D-207ENST00000505280 DSG3P32926 999 aa17.19■□□□□ 0.34
SEC24D-207ENST00000505280 NUP160Q12769 1436 aa17.19■□□□□ 0.34
SEC24D-207ENST00000505280 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
SEC24D-207ENST00000505280 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
SEC24D-207ENST00000505280 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
SEC24D-207ENST00000505280 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
SEC24D-207ENST00000505280 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
SEC24D-207ENST00000505280 ABCB7O75027 752 aa17.14■□□□□ 0.33
SEC24D-207ENST00000505280 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
SEC24D-207ENST00000505280 POLA2Q14181 598 aa17.06■□□□□ 0.32
SEC24D-207ENST00000505280 KIF21BO75037 1637 aa17.06■□□□□ 0.32
SEC24D-207ENST00000505280 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
SEC24D-207ENST00000505280 SHROOM2Q13796 1616 aa17.02■□□□□ 0.31
SEC24D-207ENST00000505280 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
SEC24D-207ENST00000505280 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
SEC24D-207ENST00000505280 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
SEC24D-207ENST00000505280 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
SEC24D-207ENST00000505280 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
SEC24D-207ENST00000505280 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
SEC24D-207ENST00000505280 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
SEC24D-207ENST00000505280 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.31
SEC24D-207ENST00000505280 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
SEC24D-207ENST00000505280 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
SEC24D-207ENST00000505280 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
SEC24D-207ENST00000505280 JPH4Q96JJ6 628 aa16.91■□□□□ 0.3
SEC24D-207ENST00000505280 DISP1Q96F81 1524 aa16.88■□□□□ 0.29
SEC24D-207ENST00000505280 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
SEC24D-207ENST00000505280 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
SEC24D-207ENST00000505280 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
SEC24D-207ENST00000505280 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
SEC24D-207ENST00000505280 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
SEC24D-207ENST00000505280 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
SEC24D-207ENST00000505280 CYB5RLQ6IPT4 315 aa16.75■□□□□ 0.27
SEC24D-207ENST00000505280 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
SEC24D-207ENST00000505280 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
SEC24D-207ENST00000505280 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
SEC24D-207ENST00000505280 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
SEC24D-207ENST00000505280 PTPRGP23470 1445 aa16.72■□□□□ 0.27
SEC24D-207ENST00000505280 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
SEC24D-207ENST00000505280 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
SEC24D-207ENST00000505280 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
SEC24D-207ENST00000505280 CLIP1P30622 1438 aa16.66■□□□□ 0.26
SEC24D-207ENST00000505280 CEP162Q5TB80 1403 aa16.66■□□□□ 0.26
SEC24D-207ENST00000505280 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
SEC24D-207ENST00000505280 PLB1Q6P1J6 1458 aa16.66■□□□□ 0.26
SEC24D-207ENST00000505280 ABCA8O94911 1581 aa16.65■□□□□ 0.26
SEC24D-207ENST00000505280 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
SEC24D-207ENST00000505280 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
SEC24D-207ENST00000505280 UHRF1BP1LA0JNW5 1464 aa16.62■□□□□ 0.25
SEC24D-207ENST00000505280 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
SEC24D-207ENST00000505280 RAPGEF6Q8TEU7 1601 aa16.57■□□□□ 0.24
SEC24D-207ENST00000505280 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
SEC24D-207ENST00000505280 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
SEC24D-207ENST00000505280 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
SEC24D-207ENST00000505280 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
SEC24D-207ENST00000505280 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.24
SEC24D-207ENST00000505280 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
SEC24D-207ENST00000505280 ARID3CA6NKF2 412 aa16.5■□□□□ 0.23
SEC24D-207ENST00000505280 HECW1Q76N89 1606 aa16.49■□□□□ 0.23
SEC24D-207ENST00000505280 ATP10BO94823 1461 aa16.48■□□□□ 0.23
SEC24D-207ENST00000505280 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
SEC24D-207ENST00000505280 CDK13Q14004 1512 aaKnown RBP16.48■□□□□ 0.23
SEC24D-207ENST00000505280 FYCO1Q9BQS8 1478 aa16.46■□□□□ 0.23
SEC24D-207ENST00000505280 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
SEC24D-207ENST00000505280 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEC24D-207ENST00000505280 EPRSP07814 1512 aaKnown RBP16.44■□□□□ 0.22
SEC24D-207ENST00000505280 VPS8Q8N3P4 1428 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms