RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
DHFR-202ENST00000504396 CAPN15O75808 1086 aa16.69■□□□□ 0.26
DHFR-202ENST00000504396 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
DHFR-202ENST00000504396 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
DHFR-202ENST00000504396 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
DHFR-202ENST00000504396 SOGA1O94964 1423 aa16.64■□□□□ 0.25
DHFR-202ENST00000504396 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
DHFR-202ENST00000504396 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
DHFR-202ENST00000504396 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
DHFR-202ENST00000504396 APLP2Q06481 763 aa16.62■□□□□ 0.25
DHFR-202ENST00000504396 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
DHFR-202ENST00000504396 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.24
DHFR-202ENST00000504396 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
DHFR-202ENST00000504396 CUX1P39880 1505 aa16.55■□□□□ 0.24
DHFR-202ENST00000504396 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
DHFR-202ENST00000504396 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
DHFR-202ENST00000504396 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
DHFR-202ENST00000504396 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
DHFR-202ENST00000504396 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
DHFR-202ENST00000504396 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
DHFR-202ENST00000504396 DSG3P32926 999 aa16.47■□□□□ 0.23
DHFR-202ENST00000504396 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
DHFR-202ENST00000504396 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
DHFR-202ENST00000504396 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
DHFR-202ENST00000504396 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
DHFR-202ENST00000504396 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
DHFR-202ENST00000504396 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
DHFR-202ENST00000504396 ABCB7O75027 752 aa16.37■□□□□ 0.21
DHFR-202ENST00000504396 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
DHFR-202ENST00000504396 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
DHFR-202ENST00000504396 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
DHFR-202ENST00000504396 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
DHFR-202ENST00000504396 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
DHFR-202ENST00000504396 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
DHFR-202ENST00000504396 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
DHFR-202ENST00000504396 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
DHFR-202ENST00000504396 NUP160Q12769 1436 aa16.24■□□□□ 0.19
DHFR-202ENST00000504396 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
DHFR-202ENST00000504396 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
DHFR-202ENST00000504396 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
DHFR-202ENST00000504396 POLA2Q14181 598 aa16.19■□□□□ 0.18
DHFR-202ENST00000504396 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
DHFR-202ENST00000504396 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
DHFR-202ENST00000504396 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
DHFR-202ENST00000504396 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.17
DHFR-202ENST00000504396 JPH4Q96JJ6 628 aa16.08■□□□□ 0.16
DHFR-202ENST00000504396 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
DHFR-202ENST00000504396 FAM69CQ0P6D2 419 aa16.02■□□□□ 0.16
DHFR-202ENST00000504396 ABCC10Q5T3U5 1492 aa15.99■□□□□ 0.15
DHFR-202ENST00000504396 ADCY10Q96PN6 1610 aa15.99■□□□□ 0.15
DHFR-202ENST00000504396 MAPKBP1O60336 1514 aa15.98■□□□□ 0.15
DHFR-202ENST00000504396 DIP2BQ9P265 1576 aa15.98■□□□□ 0.15
DHFR-202ENST00000504396 CUL7Q14999 1698 aa15.95■□□□□ 0.14
DHFR-202ENST00000504396 TSPOAP1O95153 1857 aa15.94■□□□□ 0.14
DHFR-202ENST00000504396 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
DHFR-202ENST00000504396 KDM6BO15054 1643 aa15.94■□□□□ 0.14
DHFR-202ENST00000504396 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
DHFR-202ENST00000504396 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
DHFR-202ENST00000504396 IGF1RP08069 1367 aa15.88■□□□□ 0.13
DHFR-202ENST00000504396 PTPRGP23470 1445 aa15.85■□□□□ 0.13
DHFR-202ENST00000504396 ZBTB12Q9Y330 459 aaPredicted RBP15.85■□□□□ 0.13
DHFR-202ENST00000504396 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
DHFR-202ENST00000504396 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
DHFR-202ENST00000504396 IQGAP2Q13576 1575 aa15.8■□□□□ 0.12
DHFR-202ENST00000504396 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
DHFR-202ENST00000504396 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
DHFR-202ENST00000504396 KDM4FA0A1W2PPD8 638 aa15.77■□□□□ 0.12
DHFR-202ENST00000504396 ASXL2Q76L83 1435 aa15.77■□□□□ 0.12
DHFR-202ENST00000504396 PLB1Q6P1J6 1458 aa15.75■□□□□ 0.11
DHFR-202ENST00000504396 PPRC1Q5VV67 1664 aaKnown RBP15.73■□□□□ 0.11
DHFR-202ENST00000504396 GLI2P10070 1586 aa15.72■□□□□ 0.11
DHFR-202ENST00000504396 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
DHFR-202ENST00000504396 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.11
DHFR-202ENST00000504396 DISP1Q96F81 1524 aa15.69■□□□□ 0.1
DHFR-202ENST00000504396 ADGRL1O94910 1474 aa15.68■□□□□ 0.1
DHFR-202ENST00000504396 ZCCHC11Q5TAX3 1644 aaKnown RBP15.68■□□□□ 0.1
DHFR-202ENST00000504396 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
DHFR-202ENST00000504396 RAPGEF2Q9Y4G8 1499 aa15.66■□□□□ 0.1
DHFR-202ENST00000504396 EPRSP07814 1512 aaKnown RBP15.66■□□□□ 0.1
DHFR-202ENST00000504396 KIAA0556O60303 1618 aa15.66■□□□□ 0.1
DHFR-202ENST00000504396 MAP3K4Q9Y6R4 1608 aa15.66■□□□□ 0.1
DHFR-202ENST00000504396 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
DHFR-202ENST00000504396 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
DHFR-202ENST00000504396 KDM5BQ9UGL1 1544 aa15.64■□□□□ 0.09
DHFR-202ENST00000504396 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
DHFR-202ENST00000504396 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
DHFR-202ENST00000504396 COL17A1Q9UMD9 1497 aaPredicted RBP15.6■□□□□ 0.09
DHFR-202ENST00000504396 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.09
DHFR-202ENST00000504396 ILDR1Q86SU0 546 aaPredicted RBP15.56■□□□□ 0.08
DHFR-202ENST00000504396 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
DHFR-202ENST00000504396 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
DHFR-202ENST00000504396 KCNH8Q96L42 1107 aa15.53■□□□□ 0.08
DHFR-202ENST00000504396 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.08
DHFR-202ENST00000504396 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
DHFR-202ENST00000504396 ABCA8O94911 1581 aa15.49■□□□□ 0.07
DHFR-202ENST00000504396 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
DHFR-202ENST00000504396 MAGI3Q5TCQ9 1506 aa15.47■□□□□ 0.07
DHFR-202ENST00000504396 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
DHFR-202ENST00000504396 KIF21BO75037 1637 aa15.46■□□□□ 0.07
DHFR-202ENST00000504396 PRXQ9BXM0 1461 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms