RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 SIN3AQ96ST3 1273 aa26.87■■□□□ 1.89
SCARB2-203ENST00000502908 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
SCARB2-203ENST00000502908 LRRC9Q6ZRR7 1453 aa26.83■■□□□ 1.89
SCARB2-203ENST00000502908 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
SCARB2-203ENST00000502908 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
SCARB2-203ENST00000502908 HIRIP3Q9BW71 556 aaPredicted RBP26.76■■□□□ 1.87
SCARB2-203ENST00000502908 DDX10Q13206 875 aaKnown RBP26.75■■□□□ 1.87
SCARB2-203ENST00000502908 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
SCARB2-203ENST00000502908 PCF11O94913 1555 aaKnown RBP26.74■■□□□ 1.87
SCARB2-203ENST00000502908 FHOD3Q2V2M9 1422 aa26.72■■□□□ 1.87
SCARB2-203ENST00000502908 MAP3K1Q13233 1512 aa26.71■■□□□ 1.87
SCARB2-203ENST00000502908 RAD54L2Q9Y4B4 1467 aa26.67■■□□□ 1.86
SCARB2-203ENST00000502908 FHAD1B1AJZ9 1412 aa26.67■■□□□ 1.86
SCARB2-203ENST00000502908 CFAP43Q8NDM7 1665 aa26.63■■□□□ 1.85
SCARB2-203ENST00000502908 MYT1Q01538 1121 aa26.61■■□□□ 1.85
SCARB2-203ENST00000502908 BCANQ96GW7 911 aa26.61■■□□□ 1.85
SCARB2-203ENST00000502908 FANCD2Q9BXW9 1451 aa26.6■■□□□ 1.85
SCARB2-203ENST00000502908 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
SCARB2-203ENST00000502908 TSHZ2Q9NRE2 1034 aa26.52■■□□□ 1.84
SCARB2-203ENST00000502908 PPP1R15AO75807 674 aaPredicted RBP26.51■■□□□ 1.83
SCARB2-203ENST00000502908 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
SCARB2-203ENST00000502908 NESP48681 1621 aa26.49■■□□□ 1.83
SCARB2-203ENST00000502908 FYCO1Q9BQS8 1478 aa26.48■■□□□ 1.83
SCARB2-203ENST00000502908 CASKIN1Q8WXD9 1431 aa26.46■■□□□ 1.83
SCARB2-203ENST00000502908 FKBP8Q14318 412 aa26.46■■□□□ 1.83
SCARB2-203ENST00000502908 TRIM52Q96A61 297 aa26.46■■□□□ 1.83
SCARB2-203ENST00000502908 TOPBP1Q92547 1522 aa26.45■■□□□ 1.82
SCARB2-203ENST00000502908 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
SCARB2-203ENST00000502908 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
SCARB2-203ENST00000502908 FGD6Q6ZV73 1430 aa26.4■■□□□ 1.82
SCARB2-203ENST00000502908 EFCAB5A4FU69 1503 aa26.4■■□□□ 1.82
SCARB2-203ENST00000502908 PTPRKQ15262 1439 aa26.39■■□□□ 1.81
SCARB2-203ENST00000502908 MTUS2Q5JR59 1369 aa26.39■■□□□ 1.81
SCARB2-203ENST00000502908 CTTNBP2Q8WZ74 1663 aa26.38■■□□□ 1.81
SCARB2-203ENST00000502908 TONSLQ96HA7 1378 aa26.37■■□□□ 1.81
SCARB2-203ENST00000502908 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
SCARB2-203ENST00000502908 ANP32CO43423 234 aa26.35■■□□□ 1.81
SCARB2-203ENST00000502908 TIMELESSQ9UNS1 1208 aa26.35■■□□□ 1.81
SCARB2-203ENST00000502908 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
SCARB2-203ENST00000502908 SNAPC4Q5SXM2 1469 aa26.33■■□□□ 1.81
SCARB2-203ENST00000502908 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.81
SCARB2-203ENST00000502908 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
SCARB2-203ENST00000502908 CUL7Q14999 1698 aa26.32■■□□□ 1.8
SCARB2-203ENST00000502908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.3■■□□□ 1.8
SCARB2-203ENST00000502908 LRRIQ1Q96JM4 1722 aa26.3■■□□□ 1.8
SCARB2-203ENST00000502908 PTPN23Q9H3S7 1636 aa26.25■■□□□ 1.79
SCARB2-203ENST00000502908 HFM1A2PYH4 1435 aa26.24■■□□□ 1.79
SCARB2-203ENST00000502908 CHIC2Q9UKJ5 165 aa26.24■■□□□ 1.79
SCARB2-203ENST00000502908 NCOA2Q15596 1464 aa26.24■■□□□ 1.79
SCARB2-203ENST00000502908 UACAQ9BZF9 1416 aa26.23■■□□□ 1.79
SCARB2-203ENST00000502908 CCER2I3L3R5 266 aa26.23■■□□□ 1.79
SCARB2-203ENST00000502908 DNAJC5BQ9UF47 199 aa26.23■■□□□ 1.79
SCARB2-203ENST00000502908 URB2Q14146 1524 aaKnown RBP26.23■■□□□ 1.79
SCARB2-203ENST00000502908 RRP7BPQ9NSQ0 103 aa26.22■■□□□ 1.79
SCARB2-203ENST00000502908 NAIPQ13075 1403 aa26.21■■□□□ 1.79
SCARB2-203ENST00000502908 NEFLP07196 543 aa26.2■■□□□ 1.78
SCARB2-203ENST00000502908 MYOM3Q5VTT5 1437 aa26.18■■□□□ 1.78
SCARB2-203ENST00000502908 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
SCARB2-203ENST00000502908 SAMD9Q5K651 1589 aa26.15■■□□□ 1.78
SCARB2-203ENST00000502908 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
SCARB2-203ENST00000502908 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
SCARB2-203ENST00000502908 MAGI3Q5TCQ9 1506 aa26.11■■□□□ 1.77
SCARB2-203ENST00000502908 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
SCARB2-203ENST00000502908 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
SCARB2-203ENST00000502908 KDM5BQ9UGL1 1544 aa26.08■■□□□ 1.77
SCARB2-203ENST00000502908 HNRNPUQ00839 825 aaKnown RBP eCLIP26.06■■□□□ 1.76
SCARB2-203ENST00000502908 FOXD1Q16676 465 aa26.05■■□□□ 1.76
SCARB2-203ENST00000502908 IRX6P78412 446 aaPredicted RBP26.05■■□□□ 1.76
SCARB2-203ENST00000502908 EHBP1L1Q8N3D4 1523 aa26.05■■□□□ 1.76
SCARB2-203ENST00000502908 ANP32EQ9BTT0 268 aa26.04■■□□□ 1.76
SCARB2-203ENST00000502908 HSPA5P11021 654 aaKnown RBP26.04■■□□□ 1.76
SCARB2-203ENST00000502908 UGGT2Q9NYU1 1516 aa26.03■■□□□ 1.76
SCARB2-203ENST00000502908 WASHC2AQ641Q2 1341 aa26.02■■□□□ 1.76
SCARB2-203ENST00000502908 KDM6BO15054 1643 aa26.02■■□□□ 1.76
SCARB2-203ENST00000502908 DENND4BO75064 1496 aaPredicted RBP26■■□□□ 1.75
SCARB2-203ENST00000502908 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
SCARB2-203ENST00000502908 RBM19Q9Y4C8 960 aaKnown RBP26■■□□□ 1.75
SCARB2-203ENST00000502908 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.75
SCARB2-203ENST00000502908 CDK13Q14004 1512 aaKnown RBP25.95■■□□□ 1.74
SCARB2-203ENST00000502908 CCDC184Q52MB2 194 aa25.94■■□□□ 1.74
SCARB2-203ENST00000502908 ARHGEF11O15085 1522 aa25.94■■□□□ 1.74
SCARB2-203ENST00000502908 MPHOSPH9Q99550 1183 aa25.92■■□□□ 1.74
SCARB2-203ENST00000502908 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
SCARB2-203ENST00000502908 L3MBTL2Q969R5 705 aa25.91■■□□□ 1.74
SCARB2-203ENST00000502908 C11orf95C9JLR9 678 aaPredicted RBP25.89■■□□□ 1.74
SCARB2-203ENST00000502908 EIF4G2P78344 907 aaKnown RBP eCLIP25.89■■□□□ 1.74
SCARB2-203ENST00000502908 GCC2Q8IWJ2 1684 aa25.89■■□□□ 1.73
SCARB2-203ENST00000502908 EPRSP07814 1512 aaKnown RBP25.88■■□□□ 1.73
SCARB2-203ENST00000502908 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
SCARB2-203ENST00000502908 HECW1Q76N89 1606 aa25.87■■□□□ 1.73
SCARB2-203ENST00000502908 TCOF1Q13428 1488 aaKnown RBP25.86■■□□□ 1.73
SCARB2-203ENST00000502908 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
SCARB2-203ENST00000502908 FAM9BQ8IZU0 186 aa25.81■■□□□ 1.72
SCARB2-203ENST00000502908 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
SCARB2-203ENST00000502908 ZNF644Q9H582 1327 aaPredicted RBP25.8■■□□□ 1.72
SCARB2-203ENST00000502908 CNGB1Q14028 1251 aaPredicted RBP25.79■■□□□ 1.72
SCARB2-203ENST00000502908 NBPF8Q3BBV2 869 aa25.79■■□□□ 1.72
SCARB2-203ENST00000502908 PBRM1Q86U86 1689 aa25.78■■□□□ 1.72
SCARB2-203ENST00000502908 CNTLNQ9NXG0 1405 aa25.78■■□□□ 1.72
SCARB2-203ENST00000502908 WDR62O43379 1518 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms