RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 NISCHQ9Y2I1 1504 aa37.74■■■■□ 3.63
SCARB2-203ENST00000502908 SHROOM4Q9ULL8 1493 aa32.85■■■□□ 2.85
SCARB2-203ENST00000502908 SUPT5HO00267 1087 aaKnown RBP32.3■■■□□ 2.76
SCARB2-203ENST00000502908 ZCCHC6Q5VYS8 1495 aaKnown RBP31.96■■■□□ 2.71
SCARB2-203ENST00000502908 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
SCARB2-203ENST00000502908 DCAF8L2P0C7V8 631 aa31.68■■■□□ 2.66
SCARB2-203ENST00000502908 MYO15BQ96JP2 1530 aa31.41■■■□□ 2.62
SCARB2-203ENST00000502908 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
SCARB2-203ENST00000502908 HRCP23327 699 aa30.86■■■□□ 2.53
SCARB2-203ENST00000502908 PCGF6Q9BYE7 350 aa30.85■■■□□ 2.53
SCARB2-203ENST00000502908 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
SCARB2-203ENST00000502908 LOC105371045A0A1W2PR82 267 aa30.63■■■□□ 2.49
SCARB2-203ENST00000502908 PPARGC1BQ86YN6 1023 aaKnown RBP30.47■■■□□ 2.47
SCARB2-203ENST00000502908 ABCC9O60706 1549 aa30.22■■■□□ 2.43
SCARB2-203ENST00000502908 SCRIBQ14160 1630 aa30.19■■■□□ 2.42
SCARB2-203ENST00000502908 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
SCARB2-203ENST00000502908 TRIM26Q12899 539 aaPredicted RBP29.97■■■□□ 2.39
SCARB2-203ENST00000502908 FAM9AQ8IZU1 332 aaPredicted RBP29.92■■■□□ 2.38
SCARB2-203ENST00000502908 TRIM41Q8WV44 630 aa29.9■■■□□ 2.38
SCARB2-203ENST00000502908 RB1CC1Q8TDY2 1594 aa29.88■■■□□ 2.37
SCARB2-203ENST00000502908 EHMT2Q96KQ7 1210 aa29.86■■■□□ 2.37
SCARB2-203ENST00000502908 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
SCARB2-203ENST00000502908 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
SCARB2-203ENST00000502908 WIZO95785 1651 aa29.38■■■□□ 2.29
SCARB2-203ENST00000502908 NACADO15069 1562 aa29.35■■■□□ 2.29
SCARB2-203ENST00000502908 ZEB1P37275 1124 aaPredicted RBP29.29■■■□□ 2.28
SCARB2-203ENST00000502908 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
SCARB2-203ENST00000502908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.95■■■□□ 2.23
SCARB2-203ENST00000502908 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
SCARB2-203ENST00000502908 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
SCARB2-203ENST00000502908 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
SCARB2-203ENST00000502908 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
SCARB2-203ENST00000502908 CCER1Q8TC90 406 aaPredicted RBP28.8■■■□□ 2.2
SCARB2-203ENST00000502908 SCAF1Q9H7N4 1312 aaKnown RBP28.74■■■□□ 2.19
SCARB2-203ENST00000502908 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
SCARB2-203ENST00000502908 SMARCA4P51532 1647 aa28.7■■■□□ 2.18
SCARB2-203ENST00000502908 SOGA1O94964 1423 aa28.66■■■□□ 2.18
SCARB2-203ENST00000502908 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
SCARB2-203ENST00000502908 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
SCARB2-203ENST00000502908 CEP162Q5TB80 1403 aa28.59■■■□□ 2.17
SCARB2-203ENST00000502908 RUSC2Q8N2Y8 1516 aa28.55■■■□□ 2.16
SCARB2-203ENST00000502908 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.15
SCARB2-203ENST00000502908 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
SCARB2-203ENST00000502908 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
SCARB2-203ENST00000502908 CSRNP3Q8WYN3 585 aa28.44■■■□□ 2.14
SCARB2-203ENST00000502908 TNIKQ9UKE5 1360 aa28.41■■■□□ 2.14
SCARB2-203ENST00000502908 DIEXFQ68CQ4 756 aaKnown RBP28.35■■■□□ 2.13
SCARB2-203ENST00000502908 NEUROD1Q13562 356 aa28.32■■■□□ 2.12
SCARB2-203ENST00000502908 ACIN1Q9UKV3 1341 aaKnown RBP28.26■■■□□ 2.12
SCARB2-203ENST00000502908 EEA1Q15075 1411 aa28.24■■■□□ 2.11
SCARB2-203ENST00000502908 GOLGA3Q08378 1498 aa28.22■■■□□ 2.11
SCARB2-203ENST00000502908 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
SCARB2-203ENST00000502908 RANGAP1P46060 587 aaPredicted RBP28.13■■■□□ 2.09
SCARB2-203ENST00000502908 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
SCARB2-203ENST00000502908 SYNJ1O43426 1573 aa28.13■■■□□ 2.09
SCARB2-203ENST00000502908 PELP1Q8IZL8 1130 aaKnown RBP28.11■■■□□ 2.09
SCARB2-203ENST00000502908 GTF3C3Q9Y5Q9 886 aa28.06■■■□□ 2.08
SCARB2-203ENST00000502908 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
SCARB2-203ENST00000502908 ZNF316A6NFI3 1004 aaPredicted RBP28■■■□□ 2.07
SCARB2-203ENST00000502908 CENPBP07199 599 aaPredicted RBP27.99■■■□□ 2.07
SCARB2-203ENST00000502908 CLIP1P30622 1438 aa27.99■■■□□ 2.07
SCARB2-203ENST00000502908 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
SCARB2-203ENST00000502908 YTHDC1Q96MU7 727 aaKnown RBP27.93■■■□□ 2.06
SCARB2-203ENST00000502908 KIF21BO75037 1637 aa27.92■■■□□ 2.06
SCARB2-203ENST00000502908 RAPGEF2Q9Y4G8 1499 aa27.91■■■□□ 2.06
SCARB2-203ENST00000502908 ATAD2BQ9ULI0 1458 aa27.91■■■□□ 2.06
SCARB2-203ENST00000502908 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
SCARB2-203ENST00000502908 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
SCARB2-203ENST00000502908 APLP2Q06481 763 aa27.84■■■□□ 2.05
SCARB2-203ENST00000502908 MIER1Q8N108 512 aa27.76■■■□□ 2.03
SCARB2-203ENST00000502908 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
SCARB2-203ENST00000502908 KANK4Q5T7N3 995 aaPredicted RBP27.54■■■□□ 2
SCARB2-203ENST00000502908 ARAP1Q96P48 1450 aa27.49■■□□□ 1.99
SCARB2-203ENST00000502908 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
SCARB2-203ENST00000502908 PRXQ9BXM0 1461 aa27.45■■□□□ 1.98
SCARB2-203ENST00000502908 DHX57Q6P158 1386 aaKnown RBP27.42■■□□□ 1.98
SCARB2-203ENST00000502908 CUX1P39880 1505 aa27.39■■□□□ 1.98
SCARB2-203ENST00000502908 ERICH3Q5RHP9 1530 aa27.39■■□□□ 1.98
SCARB2-203ENST00000502908 ITGAEP38570 1179 aa27.35■■□□□ 1.97
SCARB2-203ENST00000502908 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
SCARB2-203ENST00000502908 NCAPD3P42695 1498 aa27.21■■□□□ 1.95
SCARB2-203ENST00000502908 ARHGAP35Q9NRY4 1499 aa27.21■■□□□ 1.95
SCARB2-203ENST00000502908 CLSPNQ9HAW4 1339 aa27.2■■□□□ 1.95
SCARB2-203ENST00000502908 RRBP1Q9P2E9 1410 aaKnown RBP27.19■■□□□ 1.94
SCARB2-203ENST00000502908 HMGXB3Q12766 1538 aa27.19■■□□□ 1.94
SCARB2-203ENST00000502908 CCNB3Q8WWL7 1395 aa27.15■■□□□ 1.94
SCARB2-203ENST00000502908 CFTRP13569 1480 aa27.13■■□□□ 1.93
SCARB2-203ENST00000502908 CUX2O14529 1486 aa27.06■■□□□ 1.92
SCARB2-203ENST00000502908 IGF1RP08069 1367 aa27.01■■□□□ 1.91
SCARB2-203ENST00000502908 RAB3GAP2Q9H2M9 1393 aa27.01■■□□□ 1.91
SCARB2-203ENST00000502908 P3H3Q8IVL6 736 aa26.98■■□□□ 1.91
SCARB2-203ENST00000502908 KCNH8Q96L42 1107 aa26.95■■□□□ 1.9
SCARB2-203ENST00000502908 ATP1B4Q9UN42 357 aaPredicted RBP26.95■■□□□ 1.9
SCARB2-203ENST00000502908 TIAM1Q13009 1591 aa26.92■■□□□ 1.9
SCARB2-203ENST00000502908 FAM50AQ14320 339 aaKnown RBP26.91■■□□□ 1.9
SCARB2-203ENST00000502908 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
SCARB2-203ENST00000502908 SUPT16HQ9Y5B9 1047 aaKnown RBP26.91■■□□□ 1.9
SCARB2-203ENST00000502908 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
SCARB2-203ENST00000502908 PHLDB1Q86UU1 1377 aa26.88■■□□□ 1.89
SCARB2-203ENST00000502908 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms