RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 AMER1Q5JTC6 1135 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-229ENST00000496818 IFT140Q96RY7 1462 aa10.67□□□□□ -0.7
CACNA1C-229ENST00000496818 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
CACNA1C-229ENST00000496818 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
CACNA1C-229ENST00000496818 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
CACNA1C-229ENST00000496818 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
CACNA1C-229ENST00000496818 TOPBP1Q92547 1522 aa10.61□□□□□ -0.71
CACNA1C-229ENST00000496818 PROM2Q8N271 834 aa10.6□□□□□ -0.71
CACNA1C-229ENST00000496818 ZNF608Q9ULD9 1512 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-229ENST00000496818 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-229ENST00000496818 EIF4G3O43432 1585 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-229ENST00000496818 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
CACNA1C-229ENST00000496818 RIMBP3CA6NJZ7 1639 aa10.56□□□□□ -0.72
CACNA1C-229ENST00000496818 RIMBP3BA6NNM3 1639 aa10.56□□□□□ -0.72
CACNA1C-229ENST00000496818 RIMBP3Q9UFD9 1639 aa10.56□□□□□ -0.72
CACNA1C-229ENST00000496818 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
CACNA1C-229ENST00000496818 POLA1P09884 1462 aaPredicted RBP10.5□□□□□ -0.73
CACNA1C-229ENST00000496818 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
CACNA1C-229ENST00000496818 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
CACNA1C-229ENST00000496818 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
CACNA1C-229ENST00000496818 SPDYE2Q495Y8 402 aa10.49□□□□□ -0.73
CACNA1C-229ENST00000496818 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.73
CACNA1C-229ENST00000496818 TARBP1Q13395 1621 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-229ENST00000496818 WDR97A6NE52 1622 aa10.47□□□□□ -0.73
CACNA1C-229ENST00000496818 SNAPC4Q5SXM2 1469 aa10.44□□□□□ -0.74
CACNA1C-229ENST00000496818 ARAP1Q96P48 1450 aa10.44□□□□□ -0.74
CACNA1C-229ENST00000496818 SOGA1O94964 1423 aa10.44□□□□□ -0.74
CACNA1C-229ENST00000496818 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
CACNA1C-229ENST00000496818 CHD1O14646 1710 aa10.44□□□□□ -0.74
CACNA1C-229ENST00000496818 FGD5Q6ZNL6 1462 aa10.43□□□□□ -0.74
CACNA1C-229ENST00000496818 CYB5RLQ6IPT4 315 aa10.43□□□□□ -0.74
CACNA1C-229ENST00000496818 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
CACNA1C-229ENST00000496818 IFNLR1Q8IU57 520 aaPredicted RBP10.42□□□□□ -0.74
CACNA1C-229ENST00000496818 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
CACNA1C-229ENST00000496818 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
CACNA1C-229ENST00000496818 SYNJ1O43426 1573 aa10.41□□□□□ -0.74
CACNA1C-229ENST00000496818 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
CACNA1C-229ENST00000496818 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
CACNA1C-229ENST00000496818 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
CACNA1C-229ENST00000496818 CUX1P39880 1505 aa10.38□□□□□ -0.75
CACNA1C-229ENST00000496818 SYNJ2O15056 1496 aa10.37□□□□□ -0.75
CACNA1C-229ENST00000496818 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
CACNA1C-229ENST00000496818 GAPVD1Q14C86 1478 aa10.33□□□□□ -0.76
CACNA1C-229ENST00000496818 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
CACNA1C-229ENST00000496818 PLCD3Q8N3E9 789 aa10.31□□□□□ -0.76
CACNA1C-229ENST00000496818 ABCA10Q8WWZ4 1543 aa10.31□□□□□ -0.76
CACNA1C-229ENST00000496818 MIER1Q8N108 512 aa10.3□□□□□ -0.76
CACNA1C-229ENST00000496818 PBRM1Q86U86 1689 aa10.29□□□□□ -0.76
CACNA1C-229ENST00000496818 ABCA5Q8WWZ7 1642 aa10.29□□□□□ -0.76
CACNA1C-229ENST00000496818 WRNQ14191 1432 aaPredicted RBP eCLIP10.26□□□□□ -0.77
CACNA1C-229ENST00000496818 GRIN2AQ12879 1464 aa10.26□□□□□ -0.77
CACNA1C-229ENST00000496818 ADAMTS12P58397 1594 aa10.25□□□□□ -0.77
CACNA1C-229ENST00000496818 NUP160Q12769 1436 aa10.22□□□□□ -0.77
CACNA1C-229ENST00000496818 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
CACNA1C-229ENST00000496818 SPOCK2Q92563 424 aa10.21□□□□□ -0.77
CACNA1C-229ENST00000496818 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
CACNA1C-229ENST00000496818 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.78
CACNA1C-229ENST00000496818 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
CACNA1C-229ENST00000496818 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
CACNA1C-229ENST00000496818 CEP170Q5SW79 1584 aa10.19□□□□□ -0.78
CACNA1C-229ENST00000496818 ERICH3Q5RHP9 1530 aa10.19□□□□□ -0.78
CACNA1C-229ENST00000496818 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
CACNA1C-229ENST00000496818 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
CACNA1C-229ENST00000496818 PKD2Q13563 968 aa10.18□□□□□ -0.78
CACNA1C-229ENST00000496818 AKT1S1Q96B36 256 aa10.17□□□□□ -0.78
CACNA1C-229ENST00000496818 ERCC6L2Q5T890 1561 aa10.16□□□□□ -0.78
CACNA1C-229ENST00000496818 PLEKHG5O94827 1062 aa10.15□□□□□ -0.78
CACNA1C-229ENST00000496818 SHROOM2Q13796 1616 aa10.15□□□□□ -0.79
CACNA1C-229ENST00000496818 REM2Q8IYK8 340 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-229ENST00000496818 SPDYE1Q8NFV5 336 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-229ENST00000496818 PRG4Q92954 1404 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-229ENST00000496818 RUSC2Q8N2Y8 1516 aa10.11□□□□□ -0.79
CACNA1C-229ENST00000496818 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
CACNA1C-229ENST00000496818 CIZ1Q9ULV3 898 aaPredicted RBP10.09□□□□□ -0.79
CACNA1C-229ENST00000496818 PRR29P0C7W0 189 aa10.08□□□□□ -0.8
CACNA1C-229ENST00000496818 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-229ENST00000496818 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
CACNA1C-229ENST00000496818 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
CACNA1C-229ENST00000496818 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
CACNA1C-229ENST00000496818 KIF27Q86VH2 1401 aa10.04□□□□□ -0.8
CACNA1C-229ENST00000496818 ABCC10Q5T3U5 1492 aa10.04□□□□□ -0.8
CACNA1C-229ENST00000496818 CUL7Q14999 1698 aa10.02□□□□□ -0.8
CACNA1C-229ENST00000496818 KIAA0586Q9BVV6 1533 aa10.02□□□□□ -0.8
CACNA1C-229ENST00000496818 PITPNM1O00562 1244 aa10.01□□□□□ -0.81
CACNA1C-229ENST00000496818 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
CACNA1C-229ENST00000496818 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
CACNA1C-229ENST00000496818 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
CACNA1C-229ENST00000496818 ADCY10Q96PN6 1610 aa10□□□□□ -0.81
CACNA1C-229ENST00000496818 RGL2O15211 777 aa9.98□□□□□ -0.81
CACNA1C-229ENST00000496818 KIF13AQ9H1H9 1805 aa9.97□□□□□ -0.81
CACNA1C-229ENST00000496818 CARMIL2Q6F5E8 1435 aa9.97□□□□□ -0.81
CACNA1C-229ENST00000496818 KDM6BO15054 1643 aa9.96□□□□□ -0.81
CACNA1C-229ENST00000496818 IGF1RP08069 1367 aa9.96□□□□□ -0.82
CACNA1C-229ENST00000496818 DCAF8Q5TAQ9 597 aa9.95□□□□□ -0.82
CACNA1C-229ENST00000496818 PTPRGP23470 1445 aa9.94□□□□□ -0.82
CACNA1C-229ENST00000496818 CARMIL1Q5VZK9 1371 aa9.94□□□□□ -0.82
CACNA1C-229ENST00000496818 NUBP1P53384 320 aa9.94□□□□□ -0.82
CACNA1C-229ENST00000496818 IQGAP2Q13576 1575 aa9.93□□□□□ -0.82
CACNA1C-229ENST00000496818 TNIKQ9UKE5 1360 aa9.93□□□□□ -0.82
CACNA1C-229ENST00000496818 ABCC2Q92887 1545 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms