RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
CACNA1C-229ENST00000496818 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
CACNA1C-229ENST00000496818 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.16
CACNA1C-229ENST00000496818 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-229ENST00000496818 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
CACNA1C-229ENST00000496818 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
CACNA1C-229ENST00000496818 FOXD1Q16676 465 aa14.31□□□□□ -0.12
CACNA1C-229ENST00000496818 ADRA2BP18089 450 aa14.09□□□□□ -0.15
CACNA1C-229ENST00000496818 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
CACNA1C-229ENST00000496818 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-229ENST00000496818 KCNA4P22459 653 aa13.25□□□□□ -0.29
CACNA1C-229ENST00000496818 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
CACNA1C-229ENST00000496818 MSH5O43196 834 aa13□□□□□ -0.33
CACNA1C-229ENST00000496818 ABCC9O60706 1549 aa12.99□□□□□ -0.33
CACNA1C-229ENST00000496818 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
CACNA1C-229ENST00000496818 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-229ENST00000496818 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-229ENST00000496818 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
CACNA1C-229ENST00000496818 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-229ENST00000496818 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-229ENST00000496818 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
CACNA1C-229ENST00000496818 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-229ENST00000496818 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
CACNA1C-229ENST00000496818 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
CACNA1C-229ENST00000496818 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-229ENST00000496818 DMRT2Q9Y5R5 561 aa12.34□□□□□ -0.43
CACNA1C-229ENST00000496818 NACADO15069 1562 aa12.25□□□□□ -0.45
CACNA1C-229ENST00000496818 ZBTB22O15209 634 aa12.19□□□□□ -0.46
CACNA1C-229ENST00000496818 HOXD11P31277 338 aaPredicted RBP12.19□□□□□ -0.46
CACNA1C-229ENST00000496818 DNAJC5BQ9UF47 199 aa12.14□□□□□ -0.47
CACNA1C-229ENST00000496818 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
CACNA1C-229ENST00000496818 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
CACNA1C-229ENST00000496818 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
CACNA1C-229ENST00000496818 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
CACNA1C-229ENST00000496818 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
CACNA1C-229ENST00000496818 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
CACNA1C-229ENST00000496818 BICRAQ9NZM4 1560 aa11.92□□□□□ -0.5
CACNA1C-229ENST00000496818 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
CACNA1C-229ENST00000496818 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
CACNA1C-229ENST00000496818 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-229ENST00000496818 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
CACNA1C-229ENST00000496818 SCRIBQ14160 1630 aa11.77□□□□□ -0.53
CACNA1C-229ENST00000496818 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
CACNA1C-229ENST00000496818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.53
CACNA1C-229ENST00000496818 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.53
CACNA1C-229ENST00000496818 MYCNP04198 464 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-229ENST00000496818 EIF4G1Q04637 1599 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-229ENST00000496818 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-229ENST00000496818 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
CACNA1C-229ENST00000496818 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-229ENST00000496818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-229ENST00000496818 HNRNPUL2Q1KMD3 747 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-229ENST00000496818 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-229ENST00000496818 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
CACNA1C-229ENST00000496818 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
CACNA1C-229ENST00000496818 CUX2O14529 1486 aa11.29□□□□□ -0.6
CACNA1C-229ENST00000496818 NCAPD3P42695 1498 aa11.29□□□□□ -0.6
CACNA1C-229ENST00000496818 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
CACNA1C-229ENST00000496818 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
CACNA1C-229ENST00000496818 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
CACNA1C-229ENST00000496818 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
CACNA1C-229ENST00000496818 FKBP8Q14318 412 aa11.21□□□□□ -0.61
CACNA1C-229ENST00000496818 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
CACNA1C-229ENST00000496818 APLP2Q06481 763 aa11.2□□□□□ -0.62
CACNA1C-229ENST00000496818 ZNF219Q9P2Y4 722 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-229ENST00000496818 RNF39Q9H2S5 420 aa11.19□□□□□ -0.62
CACNA1C-229ENST00000496818 BAZ1AQ9NRL2 1556 aaPredicted RBP11.18□□□□□ -0.62
CACNA1C-229ENST00000496818 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-229ENST00000496818 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-229ENST00000496818 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-229ENST00000496818 CAPN15O75808 1086 aa11.11□□□□□ -0.63
CACNA1C-229ENST00000496818 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
CACNA1C-229ENST00000496818 NESP48681 1621 aa11.09□□□□□ -0.63
CACNA1C-229ENST00000496818 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
CACNA1C-229ENST00000496818 C1QBPQ07021 282 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-229ENST00000496818 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-229ENST00000496818 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
CACNA1C-229ENST00000496818 MROH2BQ7Z745 1585 aa11.02□□□□□ -0.65
CACNA1C-229ENST00000496818 POLA2Q14181 598 aa11.01□□□□□ -0.65
CACNA1C-229ENST00000496818 ABCB7O75027 752 aa10.96□□□□□ -0.65
CACNA1C-229ENST00000496818 CADPSQ9ULU8 1353 aa10.95□□□□□ -0.66
CACNA1C-229ENST00000496818 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
CACNA1C-229ENST00000496818 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-229ENST00000496818 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
CACNA1C-229ENST00000496818 WDR62O43379 1518 aa10.91□□□□□ -0.66
CACNA1C-229ENST00000496818 CEP164Q9UPV0 1460 aa10.89□□□□□ -0.67
CACNA1C-229ENST00000496818 FBLN2P98095 1184 aa10.89□□□□□ -0.67
CACNA1C-229ENST00000496818 WIZO95785 1651 aa10.85□□□□□ -0.67
CACNA1C-229ENST00000496818 SPDYE4A6NLX3 237 aa10.85□□□□□ -0.67
CACNA1C-229ENST00000496818 FANCD2Q9BXW9 1451 aa10.84□□□□□ -0.67
CACNA1C-229ENST00000496818 CFTRP13569 1480 aa10.81□□□□□ -0.68
CACNA1C-229ENST00000496818 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
CACNA1C-229ENST00000496818 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
CACNA1C-229ENST00000496818 DSG3P32926 999 aa10.79□□□□□ -0.68
CACNA1C-229ENST00000496818 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.68
CACNA1C-229ENST00000496818 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-229ENST00000496818 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-229ENST00000496818 URB2Q14146 1524 aaKnown RBP10.73□□□□□ -0.69
CACNA1C-229ENST00000496818 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
CACNA1C-229ENST00000496818 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms