RNA–Protein interactions for RNA: ENST00000496292.5

ARF4-209, Transcript of ADP ribosylation factor 4, humanhuman

TSL 5 BASIC

Gene ARF4, Length 1,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-209ENST00000496292 TOP2BQ02880 1626 aa11.9□□□□□ -0.5
ARF4-209ENST00000496292 BIVM-ERCC5R4GMW8 1640 aa11.9□□□□□ -0.51
ARF4-209ENST00000496292 SYNJ1O43426 1573 aa11.9□□□□□ -0.51
ARF4-209ENST00000496292 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
ARF4-209ENST00000496292 CUX1P39880 1505 aa11.88□□□□□ -0.51
ARF4-209ENST00000496292 ERCC6Q03468 1493 aa11.88□□□□□ -0.51
ARF4-209ENST00000496292 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
ARF4-209ENST00000496292 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
ARF4-209ENST00000496292 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
ARF4-209ENST00000496292 DNMBPQ6XZF7 1577 aa11.87□□□□□ -0.51
ARF4-209ENST00000496292 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
ARF4-209ENST00000496292 TOPBP1Q92547 1522 aa11.85□□□□□ -0.51
ARF4-209ENST00000496292 URB2Q14146 1524 aaKnown RBP11.84□□□□□ -0.51
ARF4-209ENST00000496292 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
ARF4-209ENST00000496292 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
ARF4-209ENST00000496292 WDR62O43379 1518 aa11.81□□□□□ -0.52
ARF4-209ENST00000496292 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
ARF4-209ENST00000496292 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
ARF4-209ENST00000496292 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.53
ARF4-209ENST00000496292 EEA1Q15075 1411 aa11.75□□□□□ -0.53
ARF4-209ENST00000496292 SOGA1O94964 1423 aa11.73□□□□□ -0.53
ARF4-209ENST00000496292 ABCA10Q8WWZ4 1543 aa11.72□□□□□ -0.53
ARF4-209ENST00000496292 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
ARF4-209ENST00000496292 CUX2O14529 1486 aa11.7□□□□□ -0.54
ARF4-209ENST00000496292 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
ARF4-209ENST00000496292 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
ARF4-209ENST00000496292 RAD54L2Q9Y4B4 1467 aa11.69□□□□□ -0.54
ARF4-209ENST00000496292 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
ARF4-209ENST00000496292 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
ARF4-209ENST00000496292 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
ARF4-209ENST00000496292 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
ARF4-209ENST00000496292 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
ARF4-209ENST00000496292 RUSC2Q8N2Y8 1516 aa11.64□□□□□ -0.55
ARF4-209ENST00000496292 FAM9AQ8IZU1 332 aaPredicted RBP11.63□□□□□ -0.55
ARF4-209ENST00000496292 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
ARF4-209ENST00000496292 TDRD9Q8NDG6 1382 aaKnown RBP11.61□□□□□ -0.55
ARF4-209ENST00000496292 GAPVD1Q14C86 1478 aa11.6□□□□□ -0.55
ARF4-209ENST00000496292 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
ARF4-209ENST00000496292 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
ARF4-209ENST00000496292 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
ARF4-209ENST00000496292 IGF1RP08069 1367 aa11.58□□□□□ -0.56
ARF4-209ENST00000496292 KIF21BO75037 1637 aa11.57□□□□□ -0.56
ARF4-209ENST00000496292 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
ARF4-209ENST00000496292 CUL7Q14999 1698 aa11.56□□□□□ -0.56
ARF4-209ENST00000496292 EIF4G3O43432 1585 aaKnown RBP11.56□□□□□ -0.56
ARF4-209ENST00000496292 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
ARF4-209ENST00000496292 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
ARF4-209ENST00000496292 PRXQ9BXM0 1461 aa11.56□□□□□ -0.56
ARF4-209ENST00000496292 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
ARF4-209ENST00000496292 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
ARF4-209ENST00000496292 GOLGA3Q08378 1498 aa11.53□□□□□ -0.56
ARF4-209ENST00000496292 CARMIL1Q5VZK9 1371 aa11.53□□□□□ -0.56
ARF4-209ENST00000496292 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
ARF4-209ENST00000496292 MAGI1Q96QZ7 1491 aaPredicted RBP11.5□□□□□ -0.57
ARF4-209ENST00000496292 FHAD1B1AJZ9 1412 aa11.49□□□□□ -0.57
ARF4-209ENST00000496292 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
ARF4-209ENST00000496292 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
ARF4-209ENST00000496292 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
ARF4-209ENST00000496292 SNAPC4Q5SXM2 1469 aa11.46□□□□□ -0.57
ARF4-209ENST00000496292 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
ARF4-209ENST00000496292 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
ARF4-209ENST00000496292 MIER1Q8N108 512 aa11.45□□□□□ -0.58
ARF4-209ENST00000496292 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
ARF4-209ENST00000496292 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
ARF4-209ENST00000496292 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
ARF4-209ENST00000496292 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
ARF4-209ENST00000496292 GRIN2AQ12879 1464 aa11.41□□□□□ -0.58
ARF4-209ENST00000496292 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
ARF4-209ENST00000496292 CHMP7Q8WUX9 453 aaPredicted RBP11.39□□□□□ -0.59
ARF4-209ENST00000496292 CTTNBP2Q8WZ74 1663 aa11.38□□□□□ -0.59
ARF4-209ENST00000496292 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
ARF4-209ENST00000496292 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
ARF4-209ENST00000496292 PRR29P0C7W0 189 aa11.35□□□□□ -0.59
ARF4-209ENST00000496292 NUP160Q12769 1436 aa11.35□□□□□ -0.59
ARF4-209ENST00000496292 PITPNM1O00562 1244 aa11.34□□□□□ -0.59
ARF4-209ENST00000496292 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
ARF4-209ENST00000496292 CHD1O14646 1710 aa11.34□□□□□ -0.59
ARF4-209ENST00000496292 KIAA0586Q9BVV6 1533 aa11.33□□□□□ -0.6
ARF4-209ENST00000496292 CLIP1P30622 1438 aa11.33□□□□□ -0.6
ARF4-209ENST00000496292 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
ARF4-209ENST00000496292 CEP170Q5SW79 1584 aa11.32□□□□□ -0.6
ARF4-209ENST00000496292 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
ARF4-209ENST00000496292 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
ARF4-209ENST00000496292 UGGT2Q9NYU1 1516 aa11.27□□□□□ -0.61
ARF4-209ENST00000496292 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
ARF4-209ENST00000496292 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
ARF4-209ENST00000496292 SAMD9Q5K651 1589 aa11.25□□□□□ -0.61
ARF4-209ENST00000496292 RANGAP1P46060 587 aaPredicted RBP11.25□□□□□ -0.61
ARF4-209ENST00000496292 PKD2Q13563 968 aa11.25□□□□□ -0.61
ARF4-209ENST00000496292 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
ARF4-209ENST00000496292 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
ARF4-209ENST00000496292 SHROOM2Q13796 1616 aa11.22□□□□□ -0.61
ARF4-209ENST00000496292 ARAP1Q96P48 1450 aa11.22□□□□□ -0.61
ARF4-209ENST00000496292 VPS8Q8N3P4 1428 aa11.21□□□□□ -0.61
ARF4-209ENST00000496292 CARMIL2Q6F5E8 1435 aa11.21□□□□□ -0.62
ARF4-209ENST00000496292 DISP1Q96F81 1524 aa11.2□□□□□ -0.62
ARF4-209ENST00000496292 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
ARF4-209ENST00000496292 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
ARF4-209ENST00000496292 FMN1Q68DA7 1419 aa11.19□□□□□ -0.62
ARF4-209ENST00000496292 FHOD3Q2V2M9 1422 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms