RNA–Protein interactions for RNA: ENST00000494343.5

FGD2-210, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 5

Gene FGD2, Length 2,931 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-210ENST00000494343 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
FGD2-210ENST00000494343 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
FGD2-210ENST00000494343 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
FGD2-210ENST00000494343 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
FGD2-210ENST00000494343 WDR62O43379 1518 aa20.7■□□□□ 0.9
FGD2-210ENST00000494343 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
FGD2-210ENST00000494343 CUL7Q14999 1698 aa20.67■□□□□ 0.9
FGD2-210ENST00000494343 VPS8Q8N3P4 1428 aa20.67■□□□□ 0.9
FGD2-210ENST00000494343 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
FGD2-210ENST00000494343 ANP32EQ9BTT0 268 aa20.64■□□□□ 0.9
FGD2-210ENST00000494343 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.89
FGD2-210ENST00000494343 AQRO60306 1485 aaKnown RBP eCLIP20.64■□□□□ 0.89
FGD2-210ENST00000494343 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
FGD2-210ENST00000494343 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
FGD2-210ENST00000494343 TSHZ2Q9NRE2 1034 aa20.6■□□□□ 0.89
FGD2-210ENST00000494343 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
FGD2-210ENST00000494343 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
FGD2-210ENST00000494343 IFT140Q96RY7 1462 aa20.57■□□□□ 0.88
FGD2-210ENST00000494343 CTTNBP2Q8WZ74 1663 aa20.53■□□□□ 0.88
FGD2-210ENST00000494343 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
FGD2-210ENST00000494343 APLP2Q06481 763 aa20.49■□□□□ 0.87
FGD2-210ENST00000494343 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
FGD2-210ENST00000494343 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
FGD2-210ENST00000494343 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
FGD2-210ENST00000494343 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
FGD2-210ENST00000494343 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
FGD2-210ENST00000494343 FHOD3Q2V2M9 1422 aa20.41■□□□□ 0.86
FGD2-210ENST00000494343 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
FGD2-210ENST00000494343 KANK4Q5T7N3 995 aaPredicted RBP20.37■□□□□ 0.85
FGD2-210ENST00000494343 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
FGD2-210ENST00000494343 PCF11O94913 1555 aaKnown RBP20.32■□□□□ 0.84
FGD2-210ENST00000494343 DHX57Q6P158 1386 aaKnown RBP20.3■□□□□ 0.84
FGD2-210ENST00000494343 SAMD9Q5K651 1589 aa20.3■□□□□ 0.84
FGD2-210ENST00000494343 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
FGD2-210ENST00000494343 IQGAP2Q13576 1575 aa20.28■□□□□ 0.84
FGD2-210ENST00000494343 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
FGD2-210ENST00000494343 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
FGD2-210ENST00000494343 FBLN2P98095 1184 aa20.25■□□□□ 0.83
FGD2-210ENST00000494343 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
FGD2-210ENST00000494343 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
FGD2-210ENST00000494343 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
FGD2-210ENST00000494343 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
FGD2-210ENST00000494343 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
FGD2-210ENST00000494343 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
FGD2-210ENST00000494343 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
FGD2-210ENST00000494343 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
FGD2-210ENST00000494343 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
FGD2-210ENST00000494343 KIAA0586Q9BVV6 1533 aa20.17■□□□□ 0.82
FGD2-210ENST00000494343 BCANQ96GW7 911 aa20.17■□□□□ 0.82
FGD2-210ENST00000494343 LRRC9Q6ZRR7 1453 aa20.15■□□□□ 0.82
FGD2-210ENST00000494343 LRRIQ1Q96JM4 1722 aa20.14■□□□□ 0.81
FGD2-210ENST00000494343 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.81
FGD2-210ENST00000494343 FKBP8Q14318 412 aa20.13■□□□□ 0.81
FGD2-210ENST00000494343 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
FGD2-210ENST00000494343 RBM19Q9Y4C8 960 aaKnown RBP20.12■□□□□ 0.81
FGD2-210ENST00000494343 DISP1Q96F81 1524 aa20.09■□□□□ 0.81
FGD2-210ENST00000494343 KIAA0556O60303 1618 aa20.08■□□□□ 0.8
FGD2-210ENST00000494343 NUP160Q12769 1436 aa20.07■□□□□ 0.8
FGD2-210ENST00000494343 RRBP1Q9P2E9 1410 aaKnown RBP20.06■□□□□ 0.8
FGD2-210ENST00000494343 PHLDB1Q86UU1 1377 aa20.04■□□□□ 0.8
FGD2-210ENST00000494343 CHD1O14646 1710 aa20.03■□□□□ 0.8
FGD2-210ENST00000494343 ARID3CA6NKF2 412 aa20.02■□□□□ 0.8
FGD2-210ENST00000494343 CCNB3Q8WWL7 1395 aa20.02■□□□□ 0.8
FGD2-210ENST00000494343 NEFLP07196 543 aa20.01■□□□□ 0.79
FGD2-210ENST00000494343 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
FGD2-210ENST00000494343 HECW1Q76N89 1606 aa19.99■□□□□ 0.79
FGD2-210ENST00000494343 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
FGD2-210ENST00000494343 ITGAEP38570 1179 aa19.98■□□□□ 0.79
FGD2-210ENST00000494343 CDK13Q14004 1512 aaKnown RBP19.96■□□□□ 0.79
FGD2-210ENST00000494343 MAGI3Q5TCQ9 1506 aa19.95■□□□□ 0.78
FGD2-210ENST00000494343 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
FGD2-210ENST00000494343 CCDC18Q5T9S5 1454 aa19.94■□□□□ 0.78
FGD2-210ENST00000494343 MSH5O43196 834 aa19.91■□□□□ 0.78
FGD2-210ENST00000494343 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
FGD2-210ENST00000494343 RAPGEF6Q8TEU7 1601 aa19.91■□□□□ 0.78
FGD2-210ENST00000494343 CARMIL2Q6F5E8 1435 aa19.91■□□□□ 0.78
FGD2-210ENST00000494343 EHBP1L1Q8N3D4 1523 aa19.9■□□□□ 0.78
FGD2-210ENST00000494343 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
FGD2-210ENST00000494343 NUP153P49790 1475 aaKnown RBP19.89■□□□□ 0.77
FGD2-210ENST00000494343 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
FGD2-210ENST00000494343 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
FGD2-210ENST00000494343 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
FGD2-210ENST00000494343 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
FGD2-210ENST00000494343 MAPKBP1O60336 1514 aa19.84■□□□□ 0.77
FGD2-210ENST00000494343 FGD6Q6ZV73 1430 aa19.83■□□□□ 0.77
FGD2-210ENST00000494343 FANCIQ9NVI1 1328 aa19.83■□□□□ 0.77
FGD2-210ENST00000494343 CCER2I3L3R5 266 aa19.83■□□□□ 0.76
FGD2-210ENST00000494343 PPP1R15AO75807 674 aaPredicted RBP19.83■□□□□ 0.76
FGD2-210ENST00000494343 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
FGD2-210ENST00000494343 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
FGD2-210ENST00000494343 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
FGD2-210ENST00000494343 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
FGD2-210ENST00000494343 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
FGD2-210ENST00000494343 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
FGD2-210ENST00000494343 ABCA8O94911 1581 aa19.75■□□□□ 0.75
FGD2-210ENST00000494343 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
FGD2-210ENST00000494343 ANP32CO43423 234 aa19.74■□□□□ 0.75
FGD2-210ENST00000494343 PTPRGP23470 1445 aa19.73■□□□□ 0.75
FGD2-210ENST00000494343 PTPN23Q9H3S7 1636 aa19.72■□□□□ 0.75
FGD2-210ENST00000494343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms