RNA–Protein interactions for RNA: ENST00000494343.5

FGD2-210, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 5

Gene FGD2, Length 2,931 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-210ENST00000494343 NISCHQ9Y2I1 1504 aa29.57■■■□□ 2.32
FGD2-210ENST00000494343 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
FGD2-210ENST00000494343 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
FGD2-210ENST00000494343 DCAF8L2P0C7V8 631 aa24.6■■□□□ 1.53
FGD2-210ENST00000494343 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
FGD2-210ENST00000494343 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
FGD2-210ENST00000494343 ABCC9O60706 1549 aa24.29■■□□□ 1.48
FGD2-210ENST00000494343 MYO15BQ96JP2 1530 aa23.93■■□□□ 1.42
FGD2-210ENST00000494343 NACADO15069 1562 aa23.83■■□□□ 1.4
FGD2-210ENST00000494343 SCRIBQ14160 1630 aa23.78■■□□□ 1.4
FGD2-210ENST00000494343 HRCP23327 699 aa23.77■■□□□ 1.4
FGD2-210ENST00000494343 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
FGD2-210ENST00000494343 RB1CC1Q8TDY2 1594 aa23.62■■□□□ 1.37
FGD2-210ENST00000494343 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
FGD2-210ENST00000494343 PCGF6Q9BYE7 350 aa23.24■■□□□ 1.31
FGD2-210ENST00000494343 PPARGC1BQ86YN6 1023 aaKnown RBP23.16■■□□□ 1.3
FGD2-210ENST00000494343 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
FGD2-210ENST00000494343 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
FGD2-210ENST00000494343 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
FGD2-210ENST00000494343 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
FGD2-210ENST00000494343 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
FGD2-210ENST00000494343 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
FGD2-210ENST00000494343 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
FGD2-210ENST00000494343 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
FGD2-210ENST00000494343 WIZO95785 1651 aa22.79■■□□□ 1.24
FGD2-210ENST00000494343 SMARCA4P51532 1647 aa22.72■■□□□ 1.23
FGD2-210ENST00000494343 TRIM26Q12899 539 aaPredicted RBP22.58■■□□□ 1.21
FGD2-210ENST00000494343 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
FGD2-210ENST00000494343 ZEB1P37275 1124 aaPredicted RBP22.44■■□□□ 1.18
FGD2-210ENST00000494343 TOP2AP11388 1531 aaKnown RBP22.43■■□□□ 1.18
FGD2-210ENST00000494343 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
FGD2-210ENST00000494343 PEG3Q9GZU2 1588 aa22.34■■□□□ 1.17
FGD2-210ENST00000494343 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
FGD2-210ENST00000494343 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
FGD2-210ENST00000494343 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
FGD2-210ENST00000494343 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.15
FGD2-210ENST00000494343 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
FGD2-210ENST00000494343 TRIM41Q8WV44 630 aa22.1■■□□□ 1.13
FGD2-210ENST00000494343 MYT1Q01538 1121 aa22.07■■□□□ 1.12
FGD2-210ENST00000494343 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
FGD2-210ENST00000494343 HMGXB3Q12766 1538 aa21.99■■□□□ 1.11
FGD2-210ENST00000494343 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
FGD2-210ENST00000494343 ACIN1Q9UKV3 1341 aaKnown RBP21.93■■□□□ 1.1
FGD2-210ENST00000494343 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
FGD2-210ENST00000494343 FAM9AQ8IZU1 332 aaPredicted RBP21.85■■□□□ 1.09
FGD2-210ENST00000494343 NEUROD1Q13562 356 aa21.83■■□□□ 1.08
FGD2-210ENST00000494343 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
FGD2-210ENST00000494343 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
FGD2-210ENST00000494343 CENPBP07199 599 aaPredicted RBP21.67■■□□□ 1.06
FGD2-210ENST00000494343 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
FGD2-210ENST00000494343 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
FGD2-210ENST00000494343 CFTRP13569 1480 aa21.61■■□□□ 1.05
FGD2-210ENST00000494343 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
FGD2-210ENST00000494343 SOGA1O94964 1423 aa21.56■■□□□ 1.04
FGD2-210ENST00000494343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
FGD2-210ENST00000494343 CCER1Q8TC90 406 aaPredicted RBP21.54■■□□□ 1.04
FGD2-210ENST00000494343 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
FGD2-210ENST00000494343 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
FGD2-210ENST00000494343 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
FGD2-210ENST00000494343 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
FGD2-210ENST00000494343 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
FGD2-210ENST00000494343 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
FGD2-210ENST00000494343 CUX1P39880 1505 aa21.41■■□□□ 1.02
FGD2-210ENST00000494343 NESP48681 1621 aa21.4■■□□□ 1.02
FGD2-210ENST00000494343 EEA1Q15075 1411 aa21.34■■□□□ 1.01
FGD2-210ENST00000494343 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
FGD2-210ENST00000494343 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
FGD2-210ENST00000494343 LAMC3Q9Y6N6 1575 aa21.24■□□□□ 0.99
FGD2-210ENST00000494343 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
FGD2-210ENST00000494343 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
FGD2-210ENST00000494343 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
FGD2-210ENST00000494343 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
FGD2-210ENST00000494343 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
FGD2-210ENST00000494343 KIF21BO75037 1637 aa21.13■□□□□ 0.97
FGD2-210ENST00000494343 YTHDC1Q96MU7 727 aaKnown RBP21.11■□□□□ 0.97
FGD2-210ENST00000494343 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
FGD2-210ENST00000494343 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
FGD2-210ENST00000494343 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
FGD2-210ENST00000494343 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
FGD2-210ENST00000494343 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
FGD2-210ENST00000494343 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
FGD2-210ENST00000494343 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
FGD2-210ENST00000494343 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
FGD2-210ENST00000494343 CUX2O14529 1486 aa21.06■□□□□ 0.96
FGD2-210ENST00000494343 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
FGD2-210ENST00000494343 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
FGD2-210ENST00000494343 RAD54L2Q9Y4B4 1467 aa21.02■□□□□ 0.96
FGD2-210ENST00000494343 MIER1Q8N108 512 aa20.99■□□□□ 0.95
FGD2-210ENST00000494343 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
FGD2-210ENST00000494343 TTBK1Q5TCY1 1321 aaPredicted RBP20.95■□□□□ 0.94
FGD2-210ENST00000494343 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
FGD2-210ENST00000494343 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
FGD2-210ENST00000494343 IGF1RP08069 1367 aa20.92■□□□□ 0.94
FGD2-210ENST00000494343 ABCA10Q8WWZ4 1543 aa20.9■□□□□ 0.94
FGD2-210ENST00000494343 CLIP1P30622 1438 aa20.86■□□□□ 0.93
FGD2-210ENST00000494343 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
FGD2-210ENST00000494343 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.92
FGD2-210ENST00000494343 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
FGD2-210ENST00000494343 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
FGD2-210ENST00000494343 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms