RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
SNED1-211ENST00000491761 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
SNED1-211ENST00000491761 RRBP1Q9P2E9 1410 aaKnown RBP15.37■□□□□ 0.05
SNED1-211ENST00000491761 POLR3GLQ9BT43 218 aa15.37■□□□□ 0.05
SNED1-211ENST00000491761 FANCD2Q9BXW9 1451 aa15.34■□□□□ 0.05
SNED1-211ENST00000491761 RAB3GAP2Q9H2M9 1393 aa15.29■□□□□ 0.04
SNED1-211ENST00000491761 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
SNED1-211ENST00000491761 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
SNED1-211ENST00000491761 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
SNED1-211ENST00000491761 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
SNED1-211ENST00000491761 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
SNED1-211ENST00000491761 FHOD3Q2V2M9 1422 aa15.23■□□□□ 0.03
SNED1-211ENST00000491761 TIAM1Q13009 1591 aa15.23■□□□□ 0.03
SNED1-211ENST00000491761 MAP3K1Q13233 1512 aa15.21■□□□□ 0.03
SNED1-211ENST00000491761 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
SNED1-211ENST00000491761 PHLDB1Q86UU1 1377 aa15.2■□□□□ 0.02
SNED1-211ENST00000491761 FMN1Q68DA7 1419 aa15.19■□□□□ 0.02
SNED1-211ENST00000491761 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
SNED1-211ENST00000491761 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
SNED1-211ENST00000491761 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
SNED1-211ENST00000491761 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
SNED1-211ENST00000491761 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
SNED1-211ENST00000491761 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
SNED1-211ENST00000491761 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
SNED1-211ENST00000491761 ARID3CA6NKF2 412 aa15.15■□□□□ 0.02
SNED1-211ENST00000491761 NESP48681 1621 aa15.15■□□□□ 0.02
SNED1-211ENST00000491761 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
SNED1-211ENST00000491761 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
SNED1-211ENST00000491761 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
SNED1-211ENST00000491761 CASKIN1Q8WXD9 1431 aa15.13■□□□□ 0.01
SNED1-211ENST00000491761 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
SNED1-211ENST00000491761 FYCO1Q9BQS8 1478 aa15.12■□□□□ 0.01
SNED1-211ENST00000491761 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
SNED1-211ENST00000491761 PCF11O94913 1555 aaKnown RBP15.09■□□□□ 0.01
SNED1-211ENST00000491761 ANP32CO43423 234 aa15.09■□□□□ 0.01
SNED1-211ENST00000491761 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
SNED1-211ENST00000491761 CUL7Q14999 1698 aa15.06■□□□□ 0
SNED1-211ENST00000491761 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 0
SNED1-211ENST00000491761 DAXXQ9UER7 740 aaPredicted RBP15.05■□□□□ -0
SNED1-211ENST00000491761 FGD6Q6ZV73 1430 aa15.04■□□□□ -0
SNED1-211ENST00000491761 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
SNED1-211ENST00000491761 HIRIP3Q9BW71 556 aaPredicted RBP15.03■□□□□ -0
SNED1-211ENST00000491761 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.03■□□□□ -0
SNED1-211ENST00000491761 CHIC2Q9UKJ5 165 aa15.03■□□□□ -0
SNED1-211ENST00000491761 LAMC3Q9Y6N6 1575 aa15.02■□□□□ -0
SNED1-211ENST00000491761 RRP7BPQ9NSQ0 103 aa15.01□□□□□ -0.01
SNED1-211ENST00000491761 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
SNED1-211ENST00000491761 MAPKBP1O60336 1514 aa15□□□□□ -0.01
SNED1-211ENST00000491761 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
SNED1-211ENST00000491761 CFAP43Q8NDM7 1665 aa14.99□□□□□ -0.01
SNED1-211ENST00000491761 RTL5Q5HYW3 569 aaPredicted RBP14.98□□□□□ -0.01
SNED1-211ENST00000491761 CCDC18Q5T9S5 1454 aa14.97□□□□□ -0.01
SNED1-211ENST00000491761 MYOM3Q5VTT5 1437 aa14.96□□□□□ -0.01
SNED1-211ENST00000491761 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
SNED1-211ENST00000491761 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.01
SNED1-211ENST00000491761 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
SNED1-211ENST00000491761 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
SNED1-211ENST00000491761 CTTNBP2Q8WZ74 1663 aa14.93□□□□□ -0.02
SNED1-211ENST00000491761 UACAQ9BZF9 1416 aa14.93□□□□□ -0.02
SNED1-211ENST00000491761 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
SNED1-211ENST00000491761 HFM1A2PYH4 1435 aa14.91□□□□□ -0.02
SNED1-211ENST00000491761 CCER2I3L3R5 266 aa14.91□□□□□ -0.02
SNED1-211ENST00000491761 FKBP8Q14318 412 aa14.89□□□□□ -0.03
SNED1-211ENST00000491761 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
SNED1-211ENST00000491761 SNAPC4Q5SXM2 1469 aa14.88□□□□□ -0.03
SNED1-211ENST00000491761 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
SNED1-211ENST00000491761 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
SNED1-211ENST00000491761 EIF4G2P78344 907 aaKnown RBP eCLIP14.85□□□□□ -0.03
SNED1-211ENST00000491761 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
SNED1-211ENST00000491761 NAIPQ13075 1403 aa14.84□□□□□ -0.03
SNED1-211ENST00000491761 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.04
SNED1-211ENST00000491761 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.04
SNED1-211ENST00000491761 THOC2Q8NI27 1593 aaKnown RBP14.83□□□□□ -0.04
SNED1-211ENST00000491761 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
SNED1-211ENST00000491761 MPHOSPH9Q99550 1183 aa14.82□□□□□ -0.04
SNED1-211ENST00000491761 ZNF777Q9ULD5 760 aaPredicted RBP14.82□□□□□ -0.04
SNED1-211ENST00000491761 PTPRKQ15262 1439 aa14.82□□□□□ -0.04
SNED1-211ENST00000491761 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
SNED1-211ENST00000491761 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
SNED1-211ENST00000491761 SAMD9Q5K651 1589 aa14.81□□□□□ -0.04
SNED1-211ENST00000491761 MRC2Q9UBG0 1479 aa14.8□□□□□ -0.04
SNED1-211ENST00000491761 HECW1Q76N89 1606 aa14.8□□□□□ -0.04
SNED1-211ENST00000491761 PTPN23Q9H3S7 1636 aa14.8□□□□□ -0.04
SNED1-211ENST00000491761 HSPA5P11021 654 aaKnown RBP14.79□□□□□ -0.04
SNED1-211ENST00000491761 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNED1-211ENST00000491761 IQGAP2Q13576 1575 aa14.78□□□□□ -0.04
SNED1-211ENST00000491761 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
SNED1-211ENST00000491761 EPRSP07814 1512 aaKnown RBP14.77□□□□□ -0.04
SNED1-211ENST00000491761 MIA2Q96PC5 1412 aa14.77□□□□□ -0.04
SNED1-211ENST00000491761 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
SNED1-211ENST00000491761 FOXD1Q16676 465 aa14.76□□□□□ -0.05
SNED1-211ENST00000491761 NPM2Q86SE8 214 aaKnown RBP14.76□□□□□ -0.05
SNED1-211ENST00000491761 L3MBTL2Q969R5 705 aa14.75□□□□□ -0.05
SNED1-211ENST00000491761 IRX6P78412 446 aaPredicted RBP14.74□□□□□ -0.05
SNED1-211ENST00000491761 IFT140Q96RY7 1462 aa14.74□□□□□ -0.05
SNED1-211ENST00000491761 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
SNED1-211ENST00000491761 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
SNED1-211ENST00000491761 CDK13Q14004 1512 aaKnown RBP14.73□□□□□ -0.05
SNED1-211ENST00000491761 BCL11AQ9H165 835 aa14.71□□□□□ -0.05
SNED1-211ENST00000491761 PLEKHD1A6NEE1 506 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms