RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
NEB-215ENST00000489048 SETD5Q9C0A6 1442 aa15.83■□□□□ 0.13
NEB-215ENST00000489048 FHAD1B1AJZ9 1412 aa15.8■□□□□ 0.12
NEB-215ENST00000489048 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
NEB-215ENST00000489048 PHLDB1Q86UU1 1377 aa15.77■□□□□ 0.12
NEB-215ENST00000489048 TIMELESSQ9UNS1 1208 aa15.76■□□□□ 0.11
NEB-215ENST00000489048 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
NEB-215ENST00000489048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
NEB-215ENST00000489048 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
NEB-215ENST00000489048 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
NEB-215ENST00000489048 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
NEB-215ENST00000489048 AQRO60306 1485 aaKnown RBP eCLIP15.72■□□□□ 0.11
NEB-215ENST00000489048 ITGAEP38570 1179 aa15.72■□□□□ 0.11
NEB-215ENST00000489048 EFCAB5A4FU69 1503 aa15.71■□□□□ 0.11
NEB-215ENST00000489048 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.11
NEB-215ENST00000489048 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
NEB-215ENST00000489048 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
NEB-215ENST00000489048 PPP1R15AO75807 674 aaPredicted RBP15.67■□□□□ 0.1
NEB-215ENST00000489048 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
NEB-215ENST00000489048 KCNH8Q96L42 1107 aa15.65■□□□□ 0.1
NEB-215ENST00000489048 ABCA10Q8WWZ4 1543 aa15.64■□□□□ 0.09
NEB-215ENST00000489048 CUL7Q14999 1698 aa15.63■□□□□ 0.09
NEB-215ENST00000489048 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
NEB-215ENST00000489048 CCER2I3L3R5 266 aa15.62■□□□□ 0.09
NEB-215ENST00000489048 SIN3AQ96ST3 1273 aa15.62■□□□□ 0.09
NEB-215ENST00000489048 FAM50AQ14320 339 aaKnown RBP15.6■□□□□ 0.09
NEB-215ENST00000489048 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
NEB-215ENST00000489048 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
NEB-215ENST00000489048 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
NEB-215ENST00000489048 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
NEB-215ENST00000489048 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
NEB-215ENST00000489048 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
NEB-215ENST00000489048 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
NEB-215ENST00000489048 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
NEB-215ENST00000489048 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
NEB-215ENST00000489048 TOPBP1Q92547 1522 aa15.54■□□□□ 0.08
NEB-215ENST00000489048 UACAQ9BZF9 1416 aa15.54■□□□□ 0.08
NEB-215ENST00000489048 CCDC18Q5T9S5 1454 aa15.53■□□□□ 0.08
NEB-215ENST00000489048 PTPN23Q9H3S7 1636 aa15.53■□□□□ 0.08
NEB-215ENST00000489048 SAMD9Q5K651 1589 aa15.52■□□□□ 0.08
NEB-215ENST00000489048 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.08
NEB-215ENST00000489048 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
NEB-215ENST00000489048 ANP32EQ9BTT0 268 aa15.51■□□□□ 0.07
NEB-215ENST00000489048 ANP32CO43423 234 aa15.5■□□□□ 0.07
NEB-215ENST00000489048 FKBP8Q14318 412 aa15.5■□□□□ 0.07
NEB-215ENST00000489048 P3H3Q8IVL6 736 aa15.5■□□□□ 0.07
NEB-215ENST00000489048 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
NEB-215ENST00000489048 PTPRKQ15262 1439 aa15.48■□□□□ 0.07
NEB-215ENST00000489048 TONSLQ96HA7 1378 aa15.48■□□□□ 0.07
NEB-215ENST00000489048 LRRIQ1Q96JM4 1722 aa15.47■□□□□ 0.07
NEB-215ENST00000489048 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
NEB-215ENST00000489048 NAIPQ13075 1403 aa15.46■□□□□ 0.07
NEB-215ENST00000489048 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.06
NEB-215ENST00000489048 EHBP1L1Q8N3D4 1523 aa15.45■□□□□ 0.06
NEB-215ENST00000489048 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
NEB-215ENST00000489048 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
NEB-215ENST00000489048 NCOA2Q15596 1464 aa15.44■□□□□ 0.06
NEB-215ENST00000489048 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
NEB-215ENST00000489048 MTUS2Q5JR59 1369 aa15.44■□□□□ 0.06
NEB-215ENST00000489048 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
NEB-215ENST00000489048 NEFLP07196 543 aa15.44■□□□□ 0.06
NEB-215ENST00000489048 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
NEB-215ENST00000489048 BCANQ96GW7 911 aa15.42■□□□□ 0.06
NEB-215ENST00000489048 UGGT2Q9NYU1 1516 aa15.41■□□□□ 0.06
NEB-215ENST00000489048 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
NEB-215ENST00000489048 GCC2Q8IWJ2 1684 aa15.4■□□□□ 0.06
NEB-215ENST00000489048 AKNAQ7Z591 1439 aa15.4■□□□□ 0.06
NEB-215ENST00000489048 HIRIP3Q9BW71 556 aaPredicted RBP15.39■□□□□ 0.05
NEB-215ENST00000489048 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
NEB-215ENST00000489048 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
NEB-215ENST00000489048 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
NEB-215ENST00000489048 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
NEB-215ENST00000489048 RBM19Q9Y4C8 960 aaKnown RBP15.35■□□□□ 0.05
NEB-215ENST00000489048 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
NEB-215ENST00000489048 NESP48681 1621 aa15.34■□□□□ 0.05
NEB-215ENST00000489048 MAGI3Q5TCQ9 1506 aa15.33■□□□□ 0.04
NEB-215ENST00000489048 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
NEB-215ENST00000489048 MIA2Q96PC5 1412 aa15.28■□□□□ 0.04
NEB-215ENST00000489048 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
NEB-215ENST00000489048 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
NEB-215ENST00000489048 CNTLNQ9NXG0 1405 aa15.27■□□□□ 0.03
NEB-215ENST00000489048 TDRD9Q8NDG6 1382 aaKnown RBP15.26■□□□□ 0.03
NEB-215ENST00000489048 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
NEB-215ENST00000489048 KDM6BO15054 1643 aa15.25■□□□□ 0.03
NEB-215ENST00000489048 TARBP1Q13395 1621 aaKnown RBP15.24■□□□□ 0.03
NEB-215ENST00000489048 NCOA1Q15788 1441 aa15.23■□□□□ 0.03
NEB-215ENST00000489048 EPRSP07814 1512 aaKnown RBP15.23■□□□□ 0.03
NEB-215ENST00000489048 HNRNPUQ00839 825 aaKnown RBP eCLIP15.23■□□□□ 0.03
NEB-215ENST00000489048 EIF4G2P78344 907 aaKnown RBP eCLIP15.22■□□□□ 0.03
NEB-215ENST00000489048 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
NEB-215ENST00000489048 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
NEB-215ENST00000489048 WDR62O43379 1518 aa15.21■□□□□ 0.03
NEB-215ENST00000489048 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
NEB-215ENST00000489048 ROCK1Q13464 1354 aa15.2■□□□□ 0.02
NEB-215ENST00000489048 IQGAP2Q13576 1575 aa15.2■□□□□ 0.02
NEB-215ENST00000489048 POLR1AO95602 1720 aaPredicted RBP15.19■□□□□ 0.02
NEB-215ENST00000489048 RRP7BPQ9NSQ0 103 aa15.19■□□□□ 0.02
NEB-215ENST00000489048 CCDC7Q96M83 1385 aa15.19■□□□□ 0.02
NEB-215ENST00000489048 MPHOSPH9Q99550 1183 aa15.18■□□□□ 0.02
NEB-215ENST00000489048 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms