RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
COL9A2-207ENST00000482722 URB2Q14146 1524 aaKnown RBP20.72■□□□□ 0.91
COL9A2-207ENST00000482722 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
COL9A2-207ENST00000482722 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
COL9A2-207ENST00000482722 ITGAEP38570 1179 aa20.7■□□□□ 0.9
COL9A2-207ENST00000482722 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
COL9A2-207ENST00000482722 ARHGAP35Q9NRY4 1499 aa20.64■□□□□ 0.9
COL9A2-207ENST00000482722 KIF21AQ7Z4S6 1674 aa20.62■□□□□ 0.89
COL9A2-207ENST00000482722 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
COL9A2-207ENST00000482722 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
COL9A2-207ENST00000482722 DHX57Q6P158 1386 aaKnown RBP20.61■□□□□ 0.89
COL9A2-207ENST00000482722 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
COL9A2-207ENST00000482722 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
COL9A2-207ENST00000482722 BCANQ96GW7 911 aa20.5■□□□□ 0.87
COL9A2-207ENST00000482722 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
COL9A2-207ENST00000482722 FHOD3Q2V2M9 1422 aa20.49■□□□□ 0.87
COL9A2-207ENST00000482722 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
COL9A2-207ENST00000482722 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
COL9A2-207ENST00000482722 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
COL9A2-207ENST00000482722 RRBP1Q9P2E9 1410 aaKnown RBP20.44■□□□□ 0.86
COL9A2-207ENST00000482722 FKBP8Q14318 412 aa20.39■□□□□ 0.85
COL9A2-207ENST00000482722 FAM50AQ14320 339 aaKnown RBP20.37■□□□□ 0.85
COL9A2-207ENST00000482722 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
COL9A2-207ENST00000482722 RBM19Q9Y4C8 960 aaKnown RBP20.33■□□□□ 0.85
COL9A2-207ENST00000482722 RAB3GAP2Q9H2M9 1393 aa20.33■□□□□ 0.85
COL9A2-207ENST00000482722 FBLN2P98095 1184 aa20.33■□□□□ 0.84
COL9A2-207ENST00000482722 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
COL9A2-207ENST00000482722 ERCC6Q03468 1493 aa20.32■□□□□ 0.84
COL9A2-207ENST00000482722 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
COL9A2-207ENST00000482722 ABCA5Q8WWZ7 1642 aa20.3■□□□□ 0.84
COL9A2-207ENST00000482722 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
COL9A2-207ENST00000482722 DDX10Q13206 875 aaKnown RBP20.29■□□□□ 0.84
COL9A2-207ENST00000482722 TIAM1Q13009 1591 aa20.27■□□□□ 0.83
COL9A2-207ENST00000482722 PHLDB1Q86UU1 1377 aa20.27■□□□□ 0.83
COL9A2-207ENST00000482722 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
COL9A2-207ENST00000482722 CUL7Q14999 1698 aa20.26■□□□□ 0.83
COL9A2-207ENST00000482722 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
COL9A2-207ENST00000482722 HIRIP3Q9BW71 556 aaPredicted RBP20.24■□□□□ 0.83
COL9A2-207ENST00000482722 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
COL9A2-207ENST00000482722 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
COL9A2-207ENST00000482722 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
COL9A2-207ENST00000482722 NEFLP07196 543 aa20.2■□□□□ 0.82
COL9A2-207ENST00000482722 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
COL9A2-207ENST00000482722 TRIM52Q96A61 297 aa20.17■□□□□ 0.82
COL9A2-207ENST00000482722 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
COL9A2-207ENST00000482722 MSH5O43196 834 aa20.16■□□□□ 0.82
COL9A2-207ENST00000482722 PBRM1Q86U86 1689 aa20.14■□□□□ 0.81
COL9A2-207ENST00000482722 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
COL9A2-207ENST00000482722 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
COL9A2-207ENST00000482722 CASKIN1Q8WXD9 1431 aa20.11■□□□□ 0.81
COL9A2-207ENST00000482722 MTUS2Q5JR59 1369 aa20.11■□□□□ 0.81
COL9A2-207ENST00000482722 MAP3K1Q13233 1512 aa20.11■□□□□ 0.81
COL9A2-207ENST00000482722 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
COL9A2-207ENST00000482722 FMN1Q68DA7 1419 aa20.08■□□□□ 0.81
COL9A2-207ENST00000482722 WDR62O43379 1518 aa20.08■□□□□ 0.8
COL9A2-207ENST00000482722 IFT140Q96RY7 1462 aa20.08■□□□□ 0.8
COL9A2-207ENST00000482722 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
COL9A2-207ENST00000482722 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
COL9A2-207ENST00000482722 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
COL9A2-207ENST00000482722 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
COL9A2-207ENST00000482722 LRRIQ1Q96JM4 1722 aa20.04■□□□□ 0.8
COL9A2-207ENST00000482722 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.8
COL9A2-207ENST00000482722 CFAP43Q8NDM7 1665 aa20.02■□□□□ 0.8
COL9A2-207ENST00000482722 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
COL9A2-207ENST00000482722 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
COL9A2-207ENST00000482722 IQGAP2Q13576 1575 aa19.99■□□□□ 0.79
COL9A2-207ENST00000482722 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
COL9A2-207ENST00000482722 ANP32CO43423 234 aa19.99■□□□□ 0.79
COL9A2-207ENST00000482722 FANCIQ9NVI1 1328 aa19.97■□□□□ 0.79
COL9A2-207ENST00000482722 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
COL9A2-207ENST00000482722 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
COL9A2-207ENST00000482722 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
COL9A2-207ENST00000482722 RRP7BPQ9NSQ0 103 aa19.93■□□□□ 0.78
COL9A2-207ENST00000482722 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
COL9A2-207ENST00000482722 ERICH6Q7L0X2 663 aa19.93■□□□□ 0.78
COL9A2-207ENST00000482722 IRX6P78412 446 aaPredicted RBP19.93■□□□□ 0.78
COL9A2-207ENST00000482722 PTPRKQ15262 1439 aa19.92■□□□□ 0.78
COL9A2-207ENST00000482722 FGD6Q6ZV73 1430 aa19.92■□□□□ 0.78
COL9A2-207ENST00000482722 NCOA2Q15596 1464 aa19.91■□□□□ 0.78
COL9A2-207ENST00000482722 JPH4Q96JJ6 628 aa19.91■□□□□ 0.78
COL9A2-207ENST00000482722 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
COL9A2-207ENST00000482722 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.77
COL9A2-207ENST00000482722 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
COL9A2-207ENST00000482722 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
COL9A2-207ENST00000482722 KIAA0586Q9BVV6 1533 aa19.87■□□□□ 0.77
COL9A2-207ENST00000482722 CCDC18Q5T9S5 1454 aa19.87■□□□□ 0.77
COL9A2-207ENST00000482722 EPRSP07814 1512 aaKnown RBP19.86■□□□□ 0.77
COL9A2-207ENST00000482722 TIMELESSQ9UNS1 1208 aa19.85■□□□□ 0.77
COL9A2-207ENST00000482722 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
COL9A2-207ENST00000482722 HNRNPUQ00839 825 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL9A2-207ENST00000482722 PLB1Q6P1J6 1458 aa19.82■□□□□ 0.76
COL9A2-207ENST00000482722 ZNF777Q9ULD5 760 aaPredicted RBP19.81■□□□□ 0.76
COL9A2-207ENST00000482722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.81■□□□□ 0.76
COL9A2-207ENST00000482722 MYOM3Q5VTT5 1437 aa19.81■□□□□ 0.76
COL9A2-207ENST00000482722 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
COL9A2-207ENST00000482722 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
COL9A2-207ENST00000482722 MAGI1Q96QZ7 1491 aaPredicted RBP19.77■□□□□ 0.76
COL9A2-207ENST00000482722 HFM1A2PYH4 1435 aa19.77■□□□□ 0.76
COL9A2-207ENST00000482722 KIAA0556O60303 1618 aa19.77■□□□□ 0.76
COL9A2-207ENST00000482722 DEKP35659 375 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms