RNA–Protein interactions for RNA: ENST00000476408.1

CD53-204, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-204ENST00000476408 ADRA2BP18089 450 aa10.03□□□□□ -0.8
CD53-204ENST00000476408 PLPPR3Q6T4P5 718 aa10.03□□□□□ -0.8
CD53-204ENST00000476408 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.81
CD53-204ENST00000476408 MAP3K1Q13233 1512 aa10.02□□□□□ -0.81
CD53-204ENST00000476408 TOPBP1Q92547 1522 aa10.02□□□□□ -0.81
CD53-204ENST00000476408 TOP2BQ02880 1626 aa10.01□□□□□ -0.81
CD53-204ENST00000476408 BIVM-ERCC5R4GMW8 1640 aa10.01□□□□□ -0.81
CD53-204ENST00000476408 EIF4G3O43432 1585 aaKnown RBP10.01□□□□□ -0.81
CD53-204ENST00000476408 SYNJ1O43426 1573 aa10□□□□□ -0.81
CD53-204ENST00000476408 FBLN2P98095 1184 aa9.99□□□□□ -0.81
CD53-204ENST00000476408 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
CD53-204ENST00000476408 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
CD53-204ENST00000476408 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
CD53-204ENST00000476408 MIER1Q8N108 512 aa9.98□□□□□ -0.81
CD53-204ENST00000476408 PRXQ9BXM0 1461 aa9.98□□□□□ -0.81
CD53-204ENST00000476408 UBTFP17480 764 aaKnown RBP9.97□□□□□ -0.81
CD53-204ENST00000476408 DHX57Q6P158 1386 aaKnown RBP9.97□□□□□ -0.81
CD53-204ENST00000476408 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.813e-7■■■□□ 16.8
CD53-204ENST00000476408 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
CD53-204ENST00000476408 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.82
CD53-204ENST00000476408 APLP2Q06481 763 aa9.94□□□□□ -0.82
CD53-204ENST00000476408 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
CD53-204ENST00000476408 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
CD53-204ENST00000476408 RAPGEF2Q9Y4G8 1499 aa9.91□□□□□ -0.82
CD53-204ENST00000476408 SUPT16HQ9Y5B9 1047 aaKnown RBP9.9□□□□□ -0.82
CD53-204ENST00000476408 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
CD53-204ENST00000476408 CHMP7Q8WUX9 453 aaPredicted RBP9.88□□□□□ -0.83
CD53-204ENST00000476408 TDRD9Q8NDG6 1382 aaKnown RBP9.87□□□□□ -0.83
CD53-204ENST00000476408 EHMT2Q96KQ7 1210 aa9.86□□□□□ -0.83
CD53-204ENST00000476408 ANP32EQ9BTT0 268 aa9.86□□□□□ -0.83
CD53-204ENST00000476408 CLASP1Q7Z460 1538 aa9.86□□□□□ -0.83
CD53-204ENST00000476408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.86□□□□□ -0.83
CD53-204ENST00000476408 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
CD53-204ENST00000476408 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
CD53-204ENST00000476408 CCNB3Q8WWL7 1395 aa9.84□□□□□ -0.83
CD53-204ENST00000476408 SNAPC4Q5SXM2 1469 aa9.83□□□□□ -0.84
CD53-204ENST00000476408 MAGI1Q96QZ7 1491 aaPredicted RBP9.83□□□□□ -0.84
CD53-204ENST00000476408 KIF27Q86VH2 1401 aa9.82□□□□□ -0.84
CD53-204ENST00000476408 HNRNPUL2Q1KMD3 747 aaKnown RBP9.81□□□□□ -0.84
CD53-204ENST00000476408 YTHDC1Q96MU7 727 aaKnown RBP9.81□□□□□ -0.84
CD53-204ENST00000476408 GRIN2BQ13224 1484 aa9.8□□□□□ -0.84
CD53-204ENST00000476408 CCER2I3L3R5 266 aa9.8□□□□□ -0.84
CD53-204ENST00000476408 TSHZ2Q9NRE2 1034 aa9.8□□□□□ -0.84
CD53-204ENST00000476408 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
CD53-204ENST00000476408 GAPVD1Q14C86 1478 aa9.79□□□□□ -0.84
CD53-204ENST00000476408 FGD5Q6ZNL6 1462 aa9.79□□□□□ -0.84
CD53-204ENST00000476408 MAPKBP1O60336 1514 aa9.79□□□□□ -0.84
CD53-204ENST00000476408 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
CD53-204ENST00000476408 TIAM1Q13009 1591 aa9.78□□□□□ -0.84
CD53-204ENST00000476408 ERICH6BQ5W0A0 696 aa9.77□□□□□ -0.85
CD53-204ENST00000476408 PBRM1Q86U86 1689 aa9.77□□□□□ -0.85
CD53-204ENST00000476408 CFAP43Q8NDM7 1665 aa9.77□□□□□ -0.85
CD53-204ENST00000476408 ARHGAP35Q9NRY4 1499 aa9.76□□□□□ -0.85
CD53-204ENST00000476408 FHAD1B1AJZ9 1412 aa9.75□□□□□ -0.85
CD53-204ENST00000476408 SETD5Q9C0A6 1442 aa9.74□□□□□ -0.85
CD53-204ENST00000476408 CUX1P39880 1505 aa9.73□□□□□ -0.85
CD53-204ENST00000476408 EFCAB5A4FU69 1503 aa9.72□□□□□ -0.85
CD53-204ENST00000476408 RAB3GAP2Q9H2M9 1393 aa9.71□□□□□ -0.86
CD53-204ENST00000476408 LRRC9Q6ZRR7 1453 aa9.71□□□□□ -0.86
CD53-204ENST00000476408 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
CD53-204ENST00000476408 FANCIQ9NVI1 1328 aa9.68□□□□□ -0.86
CD53-204ENST00000476408 ABCA5Q8WWZ7 1642 aa9.67□□□□□ -0.86
CD53-204ENST00000476408 ERCC6L2Q5T890 1561 aa9.67□□□□□ -0.86
CD53-204ENST00000476408 ABCA10Q8WWZ4 1543 aa9.67□□□□□ -0.86
CD53-204ENST00000476408 FYCO1Q9BQS8 1478 aa9.67□□□□□ -0.86
CD53-204ENST00000476408 PPP1R15AO75807 674 aaPredicted RBP9.67□□□□□ -0.86
CD53-204ENST00000476408 NEFLP07196 543 aa9.67□□□□□ -0.86
CD53-204ENST00000476408 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
CD53-204ENST00000476408 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
CD53-204ENST00000476408 KANK4Q5T7N3 995 aaPredicted RBP9.66□□□□□ -0.86
CD53-204ENST00000476408 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
CD53-204ENST00000476408 SHROOM2Q13796 1616 aa9.64□□□□□ -0.87
CD53-204ENST00000476408 NUP160Q12769 1436 aa9.64□□□□□ -0.87
CD53-204ENST00000476408 AKNAQ7Z591 1439 aa9.63□□□□□ -0.87
CD53-204ENST00000476408 NPM1P06748 294 aaKnown RBP eCLIP9.62□□□□□ -0.87
CD53-204ENST00000476408 CASKIN1Q8WXD9 1431 aa9.62□□□□□ -0.87
CD53-204ENST00000476408 FAM69CQ0P6D2 419 aa9.61□□□□□ -0.87
CD53-204ENST00000476408 UACAQ9BZF9 1416 aa9.61□□□□□ -0.87
CD53-204ENST00000476408 ADAMTS12P58397 1594 aa9.61□□□□□ -0.87
CD53-204ENST00000476408 IGF1RP08069 1367 aa9.61□□□□□ -0.87
CD53-204ENST00000476408 CCDC18Q5T9S5 1454 aa9.6□□□□□ -0.87
CD53-204ENST00000476408 HFM1A2PYH4 1435 aa9.6□□□□□ -0.87
CD53-204ENST00000476408 BCL11AQ9H165 835 aa9.6□□□□□ -0.87
CD53-204ENST00000476408 CUL7Q14999 1698 aa9.59□□□□□ -0.87
CD53-204ENST00000476408 ANP32CO43423 234 aa9.59□□□□□ -0.87
CD53-204ENST00000476408 JPH4Q96JJ6 628 aa9.59□□□□□ -0.87
CD53-204ENST00000476408 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
CD53-204ENST00000476408 PRG4Q92954 1404 aaPredicted RBP9.58□□□□□ -0.88
CD53-204ENST00000476408 ABCC10Q5T3U5 1492 aa9.58□□□□□ -0.88
CD53-204ENST00000476408 FMN1Q68DA7 1419 aa9.57□□□□□ -0.88
CD53-204ENST00000476408 FBXO41Q8TF61 875 aa9.57□□□□□ -0.88
CD53-204ENST00000476408 PHLDB1Q86UU1 1377 aa9.57□□□□□ -0.88
CD53-204ENST00000476408 NCOA2Q15596 1464 aa9.57□□□□□ -0.88
CD53-204ENST00000476408 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
CD53-204ENST00000476408 TSPOAP1O95153 1857 aa9.57□□□□□ -0.88
CD53-204ENST00000476408 CARMIL1Q5VZK9 1371 aa9.56□□□□□ -0.88
CD53-204ENST00000476408 FKBP8Q14318 412 aa9.56□□□□□ -0.88
CD53-204ENST00000476408 KDM6BO15054 1643 aa9.55□□□□□ -0.88
CD53-204ENST00000476408 FGD6Q6ZV73 1430 aa9.54□□□□□ -0.88
CD53-204ENST00000476408 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms