RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
UBR4-212ENST00000475973 ARHGEF11O15085 1522 aa10.91□□□□□ -0.66
UBR4-212ENST00000475973 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
UBR4-212ENST00000475973 MAGI1Q96QZ7 1491 aaPredicted RBP10.9□□□□□ -0.66
UBR4-212ENST00000475973 ZEB1P37275 1124 aaPredicted RBP10.9□□□□□ -0.66
UBR4-212ENST00000475973 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
UBR4-212ENST00000475973 RIMBP3CA6NJZ7 1639 aa10.88□□□□□ -0.67
UBR4-212ENST00000475973 RIMBP3BA6NNM3 1639 aa10.88□□□□□ -0.67
UBR4-212ENST00000475973 RIMBP3Q9UFD9 1639 aa10.88□□□□□ -0.67
UBR4-212ENST00000475973 CHMP7Q8WUX9 453 aaPredicted RBP10.87□□□□□ -0.67
UBR4-212ENST00000475973 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
UBR4-212ENST00000475973 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.67
UBR4-212ENST00000475973 ABCA10Q8WWZ4 1543 aa10.86□□□□□ -0.67
UBR4-212ENST00000475973 SYNJ2O15056 1496 aa10.86□□□□□ -0.67
UBR4-212ENST00000475973 CHD1O14646 1710 aa10.85□□□□□ -0.67
UBR4-212ENST00000475973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
UBR4-212ENST00000475973 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
UBR4-212ENST00000475973 SYNJ1O43426 1573 aa10.85□□□□□ -0.67
UBR4-212ENST00000475973 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
UBR4-212ENST00000475973 SAMD1Q6SPF0 538 aaPredicted RBP10.83□□□□□ -0.68
UBR4-212ENST00000475973 U3KPZ7 1027 aaPredicted RBP10.83□□□□□ -0.68
UBR4-212ENST00000475973 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
UBR4-212ENST00000475973 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
UBR4-212ENST00000475973 CLASP1Q7Z460 1538 aa10.8□□□□□ -0.68
UBR4-212ENST00000475973 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
UBR4-212ENST00000475973 TOP2BQ02880 1626 aa10.8□□□□□ -0.68
UBR4-212ENST00000475973 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
UBR4-212ENST00000475973 FKBP8Q14318 412 aa10.78□□□□□ -0.68
UBR4-212ENST00000475973 PBRM1Q86U86 1689 aa10.78□□□□□ -0.68
UBR4-212ENST00000475973 GRIN2AQ12879 1464 aa10.75□□□□□ -0.69
UBR4-212ENST00000475973 ADAMTS12P58397 1594 aa10.75□□□□□ -0.69
UBR4-212ENST00000475973 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
UBR4-212ENST00000475973 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
UBR4-212ENST00000475973 EEA1Q15075 1411 aa10.72□□□□□ -0.69
UBR4-212ENST00000475973 NUP160Q12769 1436 aa10.71□□□□□ -0.69
UBR4-212ENST00000475973 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
UBR4-212ENST00000475973 TNIKQ9UKE5 1360 aa10.67□□□□□ -0.7
UBR4-212ENST00000475973 CEP170Q5SW79 1584 aa10.67□□□□□ -0.7
UBR4-212ENST00000475973 KIF27Q86VH2 1401 aa10.66□□□□□ -0.7
UBR4-212ENST00000475973 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
UBR4-212ENST00000475973 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
UBR4-212ENST00000475973 APLP2Q06481 763 aa10.61□□□□□ -0.71
UBR4-212ENST00000475973 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
UBR4-212ENST00000475973 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
UBR4-212ENST00000475973 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
UBR4-212ENST00000475973 PRG4Q92954 1404 aaPredicted RBP10.59□□□□□ -0.71
UBR4-212ENST00000475973 RUSC2Q8N2Y8 1516 aa10.59□□□□□ -0.71
UBR4-212ENST00000475973 ERCC6L2Q5T890 1561 aa10.59□□□□□ -0.71
UBR4-212ENST00000475973 CUL7Q14999 1698 aa10.58□□□□□ -0.72
UBR4-212ENST00000475973 IGF1RP08069 1367 aa10.58□□□□□ -0.72
UBR4-212ENST00000475973 JPH4Q96JJ6 628 aa10.58□□□□□ -0.72
UBR4-212ENST00000475973 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
UBR4-212ENST00000475973 KIAA0586Q9BVV6 1533 aa10.56□□□□□ -0.72
UBR4-212ENST00000475973 CARMIL1Q5VZK9 1371 aa10.54□□□□□ -0.72
UBR4-212ENST00000475973 KIF21BO75037 1637 aa10.54□□□□□ -0.72
UBR4-212ENST00000475973 GOLGA3Q08378 1498 aa10.52□□□□□ -0.73
UBR4-212ENST00000475973 NPM1P06748 294 aaKnown RBP eCLIP10.51□□□□□ -0.73
UBR4-212ENST00000475973 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
UBR4-212ENST00000475973 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
UBR4-212ENST00000475973 RAPGEF2Q9Y4G8 1499 aa10.46□□□□□ -0.74
UBR4-212ENST00000475973 IQGAP2Q13576 1575 aa10.46□□□□□ -0.74
UBR4-212ENST00000475973 MAPKBP1O60336 1514 aa10.45□□□□□ -0.74
UBR4-212ENST00000475973 PTPRGP23470 1445 aa10.45□□□□□ -0.74
UBR4-212ENST00000475973 ABCC10Q5T3U5 1492 aa10.43□□□□□ -0.74
UBR4-212ENST00000475973 ADCY10Q96PN6 1610 aa10.42□□□□□ -0.74
UBR4-212ENST00000475973 TTBK1Q5TCY1 1321 aaPredicted RBP10.41□□□□□ -0.74
UBR4-212ENST00000475973 FAM69CQ0P6D2 419 aa10.41□□□□□ -0.74
UBR4-212ENST00000475973 RNF39Q9H2S5 420 aa10.41□□□□□ -0.74
UBR4-212ENST00000475973 VPS8Q8N3P4 1428 aa10.4□□□□□ -0.75
UBR4-212ENST00000475973 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
UBR4-212ENST00000475973 UGGT2Q9NYU1 1516 aa10.39□□□□□ -0.75
UBR4-212ENST00000475973 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
UBR4-212ENST00000475973 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
UBR4-212ENST00000475973 UACAQ9BZF9 1416 aa10.38□□□□□ -0.75
UBR4-212ENST00000475973 DIP2BQ9P265 1576 aa10.38□□□□□ -0.75
UBR4-212ENST00000475973 DISP1Q96F81 1524 aa10.38□□□□□ -0.75
UBR4-212ENST00000475973 ACIN1Q9UKV3 1341 aaKnown RBP10.37□□□□□ -0.75
UBR4-212ENST00000475973 UHRF1BP1LA0JNW5 1464 aa10.37□□□□□ -0.75
UBR4-212ENST00000475973 PRXQ9BXM0 1461 aa10.37□□□□□ -0.75
UBR4-212ENST00000475973 CLIP1P30622 1438 aa10.37□□□□□ -0.75
UBR4-212ENST00000475973 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
UBR4-212ENST00000475973 PLB1Q6P1J6 1458 aa10.36□□□□□ -0.75
UBR4-212ENST00000475973 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
UBR4-212ENST00000475973 KIAA0556O60303 1618 aa10.36□□□□□ -0.75
UBR4-212ENST00000475973 ASXL2Q76L83 1435 aa10.33□□□□□ -0.76
UBR4-212ENST00000475973 POLA2Q14181 598 aa10.33□□□□□ -0.76
UBR4-212ENST00000475973 KIF13AQ9H1H9 1805 aa10.33□□□□□ -0.76
UBR4-212ENST00000475973 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
UBR4-212ENST00000475973 SLC24A1O60721 1099 aa10.32□□□□□ -0.76
UBR4-212ENST00000475973 C1QBPQ07021 282 aaKnown RBP10.32□□□□□ -0.76
UBR4-212ENST00000475973 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
UBR4-212ENST00000475973 CAPN15O75808 1086 aa10.3□□□□□ -0.76
UBR4-212ENST00000475973 DIEXFQ68CQ4 756 aaKnown RBP10.3□□□□□ -0.76
UBR4-212ENST00000475973 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
UBR4-212ENST00000475973 KDM6BO15054 1643 aa10.29□□□□□ -0.76
UBR4-212ENST00000475973 CTTNBP2Q8WZ74 1663 aa10.29□□□□□ -0.76
UBR4-212ENST00000475973 ZNF316A6NFI3 1004 aaPredicted RBP10.29□□□□□ -0.76
UBR4-212ENST00000475973 NEUROD1Q13562 356 aa10.29□□□□□ -0.76
UBR4-212ENST00000475973 PROM2Q8N271 834 aa10.29□□□□□ -0.76
UBR4-212ENST00000475973 GLI2P10070 1586 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms