RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CUX1P39880 1505 aa19.14■□□□□ 0.65
CALD1-217ENST00000475772 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
CALD1-217ENST00000475772 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
CALD1-217ENST00000475772 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
CALD1-217ENST00000475772 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
CALD1-217ENST00000475772 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
CALD1-217ENST00000475772 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
CALD1-217ENST00000475772 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
CALD1-217ENST00000475772 MYCNP04198 464 aaPredicted RBP19.01■□□□□ 0.63
CALD1-217ENST00000475772 C1QBPQ07021 282 aaKnown RBP19.01■□□□□ 0.63
CALD1-217ENST00000475772 TRHP20396 242 aaPredicted RBP19■□□□□ 0.63
CALD1-217ENST00000475772 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
CALD1-217ENST00000475772 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
CALD1-217ENST00000475772 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
CALD1-217ENST00000475772 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
CALD1-217ENST00000475772 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
CALD1-217ENST00000475772 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
CALD1-217ENST00000475772 ABCA5Q8WWZ7 1642 aa18.9■□□□□ 0.62
CALD1-217ENST00000475772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
CALD1-217ENST00000475772 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
CALD1-217ENST00000475772 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
CALD1-217ENST00000475772 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
CALD1-217ENST00000475772 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
CALD1-217ENST00000475772 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
CALD1-217ENST00000475772 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
CALD1-217ENST00000475772 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
CALD1-217ENST00000475772 NUP160Q12769 1436 aa18.76■□□□□ 0.59
CALD1-217ENST00000475772 CACNB1Q02641 598 aaPredicted RBP18.76■□□□□ 0.59
CALD1-217ENST00000475772 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
CALD1-217ENST00000475772 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
CALD1-217ENST00000475772 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
CALD1-217ENST00000475772 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
CALD1-217ENST00000475772 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
CALD1-217ENST00000475772 APLP2Q06481 763 aa18.65■□□□□ 0.58
CALD1-217ENST00000475772 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
CALD1-217ENST00000475772 JPH4Q96JJ6 628 aa18.6■□□□□ 0.57
CALD1-217ENST00000475772 ATXN8OSP0DMR3 200 aa18.59■□□□□ 0.57
CALD1-217ENST00000475772 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
CALD1-217ENST00000475772 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
CALD1-217ENST00000475772 CAPN15O75808 1086 aa18.53■□□□□ 0.56
CALD1-217ENST00000475772 KIF13AQ9H1H9 1805 aa18.53■□□□□ 0.56
CALD1-217ENST00000475772 IGF1RP08069 1367 aa18.49■□□□□ 0.55
CALD1-217ENST00000475772 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
CALD1-217ENST00000475772 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
CALD1-217ENST00000475772 KIAA0586Q9BVV6 1533 aa18.41■□□□□ 0.54
CALD1-217ENST00000475772 FAM69CQ0P6D2 419 aa18.39■□□□□ 0.53
CALD1-217ENST00000475772 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
CALD1-217ENST00000475772 ADCY10Q96PN6 1610 aa18.38■□□□□ 0.53
CALD1-217ENST00000475772 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
CALD1-217ENST00000475772 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
CALD1-217ENST00000475772 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
CALD1-217ENST00000475772 CUL7Q14999 1698 aa18.34■□□□□ 0.53
CALD1-217ENST00000475772 DIP2BQ9P265 1576 aa18.33■□□□□ 0.52
CALD1-217ENST00000475772 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
CALD1-217ENST00000475772 DSG3P32926 999 aa18.3■□□□□ 0.52
CALD1-217ENST00000475772 PTPRGP23470 1445 aa18.26■□□□□ 0.51
CALD1-217ENST00000475772 TSPOAP1O95153 1857 aa18.25■□□□□ 0.51
CALD1-217ENST00000475772 TTBK1Q5TCY1 1321 aaPredicted RBP18.23■□□□□ 0.51
CALD1-217ENST00000475772 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.51
CALD1-217ENST00000475772 ABCB7O75027 752 aa18.18■□□□□ 0.5
CALD1-217ENST00000475772 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
CALD1-217ENST00000475772 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
CALD1-217ENST00000475772 KDM4FA0A1W2PPD8 638 aa18.17■□□□□ 0.5
CALD1-217ENST00000475772 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
CALD1-217ENST00000475772 DISP1Q96F81 1524 aa18.17■□□□□ 0.5
CALD1-217ENST00000475772 KDM6BO15054 1643 aa18.16■□□□□ 0.5
CALD1-217ENST00000475772 POLA2Q14181 598 aa18.14■□□□□ 0.49
CALD1-217ENST00000475772 ASXL2Q76L83 1435 aa18.14■□□□□ 0.49
CALD1-217ENST00000475772 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.49
CALD1-217ENST00000475772 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
CALD1-217ENST00000475772 UACAQ9BZF9 1416 aa18.12■□□□□ 0.49
CALD1-217ENST00000475772 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
CALD1-217ENST00000475772 GLI2P10070 1586 aa18.1■□□□□ 0.49
CALD1-217ENST00000475772 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
CALD1-217ENST00000475772 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
CALD1-217ENST00000475772 KDM5BQ9UGL1 1544 aa18.07■□□□□ 0.48
CALD1-217ENST00000475772 COL17A1Q9UMD9 1497 aaPredicted RBP18.05■□□□□ 0.48
CALD1-217ENST00000475772 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
CALD1-217ENST00000475772 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
CALD1-217ENST00000475772 ZCCHC11Q5TAX3 1644 aaKnown RBP18.01■□□□□ 0.47
CALD1-217ENST00000475772 MAP3K4Q9Y6R4 1608 aa17.99■□□□□ 0.47
CALD1-217ENST00000475772 CTTNBP2Q8WZ74 1663 aa17.95■□□□□ 0.46
CALD1-217ENST00000475772 PRXQ9BXM0 1461 aa17.92■□□□□ 0.46
CALD1-217ENST00000475772 ABCA8O94911 1581 aa17.91■□□□□ 0.46
CALD1-217ENST00000475772 WDR7Q9Y4E6 1490 aa17.9■□□□□ 0.46
CALD1-217ENST00000475772 ADGRL1O94910 1474 aa17.89■□□□□ 0.45
CALD1-217ENST00000475772 TEX14Q8IWB6 1497 aa17.89■□□□□ 0.45
CALD1-217ENST00000475772 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
CALD1-217ENST00000475772 GOLGA3Q08378 1498 aa17.87■□□□□ 0.45
CALD1-217ENST00000475772 CD109Q6YHK3 1445 aa17.84■□□□□ 0.45
CALD1-217ENST00000475772 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.45
CALD1-217ENST00000475772 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
CALD1-217ENST00000475772 P3H3Q8IVL6 736 aa17.81■□□□□ 0.44
CALD1-217ENST00000475772 ZBTB12Q9Y330 459 aaPredicted RBP17.8■□□□□ 0.44
CALD1-217ENST00000475772 ATP10BO94823 1461 aa17.79■□□□□ 0.44
CALD1-217ENST00000475772 ARID3CA6NKF2 412 aa17.77■□□□□ 0.44
CALD1-217ENST00000475772 MKRN4PQ13434 485 aaPredicted RBP17.74■□□□□ 0.43
CALD1-217ENST00000475772 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
CALD1-217ENST00000475772 SAMD9Q5K651 1589 aa17.71■□□□□ 0.43
CALD1-217ENST00000475772 ARAP3Q8WWN8 1544 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms