RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 AEBP2Q6ZN18 517 aaPredicted RBP30.91■■■□□ 2.54
CALD1-217ENST00000475772 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
CALD1-217ENST00000475772 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
CALD1-217ENST00000475772 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
CALD1-217ENST00000475772 SENP3Q9H4L4 574 aaPredicted RBP26.19■■□□□ 1.78
CALD1-217ENST00000475772 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
CALD1-217ENST00000475772 FOXD1Q16676 465 aa24.35■■□□□ 1.49
CALD1-217ENST00000475772 ABCC9O60706 1549 aa23.88■■□□□ 1.41
CALD1-217ENST00000475772 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
CALD1-217ENST00000475772 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
CALD1-217ENST00000475772 ADRA2BP18089 450 aa23.33■■□□□ 1.33
CALD1-217ENST00000475772 PIAS4Q8N2W9 510 aaPredicted RBP22.9■■□□□ 1.26
CALD1-217ENST00000475772 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
CALD1-217ENST00000475772 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
CALD1-217ENST00000475772 NACADO15069 1562 aa22.46■■□□□ 1.19
CALD1-217ENST00000475772 MSH5O43196 834 aa22.44■■□□□ 1.18
CALD1-217ENST00000475772 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
CALD1-217ENST00000475772 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
CALD1-217ENST00000475772 UNC13AQ9UPW8 1703 aa22.21■■□□□ 1.15
CALD1-217ENST00000475772 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
CALD1-217ENST00000475772 BICRAQ9NZM4 1560 aa22.06■■□□□ 1.12
CALD1-217ENST00000475772 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
CALD1-217ENST00000475772 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
CALD1-217ENST00000475772 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
CALD1-217ENST00000475772 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
CALD1-217ENST00000475772 CC2D2AQ9P2K1 1620 aa21.56■■□□□ 1.04
CALD1-217ENST00000475772 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
CALD1-217ENST00000475772 PPP4R3CPQ6ZMV5 832 aa21.48■■□□□ 1.03
CALD1-217ENST00000475772 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
CALD1-217ENST00000475772 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
CALD1-217ENST00000475772 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
CALD1-217ENST00000475772 DMRT2Q9Y5R5 561 aa20.91■□□□□ 0.94
CALD1-217ENST00000475772 KCNA4P22459 653 aa20.9■□□□□ 0.94
CALD1-217ENST00000475772 CNKSR2Q8WXI2 1034 aa20.89■□□□□ 0.93
CALD1-217ENST00000475772 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
CALD1-217ENST00000475772 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
CALD1-217ENST00000475772 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
CALD1-217ENST00000475772 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
CALD1-217ENST00000475772 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
CALD1-217ENST00000475772 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
CALD1-217ENST00000475772 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
CALD1-217ENST00000475772 CUX2O14529 1486 aa20.57■□□□□ 0.88
CALD1-217ENST00000475772 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
CALD1-217ENST00000475772 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
CALD1-217ENST00000475772 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
CALD1-217ENST00000475772 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
CALD1-217ENST00000475772 NESP48681 1621 aa20.51■□□□□ 0.87
CALD1-217ENST00000475772 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
CALD1-217ENST00000475772 HOXD11P31277 338 aaPredicted RBP20.47■□□□□ 0.87
CALD1-217ENST00000475772 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
CALD1-217ENST00000475772 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
CALD1-217ENST00000475772 MROH2BQ7Z745 1585 aa20.39■□□□□ 0.85
CALD1-217ENST00000475772 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
CALD1-217ENST00000475772 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
CALD1-217ENST00000475772 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
CALD1-217ENST00000475772 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
CALD1-217ENST00000475772 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.81
CALD1-217ENST00000475772 WIZO95785 1651 aa20.13■□□□□ 0.81
CALD1-217ENST00000475772 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
CALD1-217ENST00000475772 WDR62O43379 1518 aa19.96■□□□□ 0.79
CALD1-217ENST00000475772 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
CALD1-217ENST00000475772 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
CALD1-217ENST00000475772 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
CALD1-217ENST00000475772 CFTRP13569 1480 aa19.87■□□□□ 0.77
CALD1-217ENST00000475772 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
CALD1-217ENST00000475772 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
CALD1-217ENST00000475772 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
CALD1-217ENST00000475772 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
CALD1-217ENST00000475772 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
CALD1-217ENST00000475772 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
CALD1-217ENST00000475772 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
CALD1-217ENST00000475772 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
CALD1-217ENST00000475772 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
CALD1-217ENST00000475772 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
CALD1-217ENST00000475772 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
CALD1-217ENST00000475772 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
CALD1-217ENST00000475772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
CALD1-217ENST00000475772 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
CALD1-217ENST00000475772 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
CALD1-217ENST00000475772 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
CALD1-217ENST00000475772 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
CALD1-217ENST00000475772 DNMBPQ6XZF7 1577 aa19.39■□□□□ 0.69
CALD1-217ENST00000475772 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
CALD1-217ENST00000475772 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
CALD1-217ENST00000475772 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
CALD1-217ENST00000475772 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
CALD1-217ENST00000475772 POLA1P09884 1462 aaPredicted RBP19.29■□□□□ 0.68
CALD1-217ENST00000475772 CHD1O14646 1710 aa19.28■□□□□ 0.68
CALD1-217ENST00000475772 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.67
CALD1-217ENST00000475772 ZBTB22O15209 634 aa19.26■□□□□ 0.67
CALD1-217ENST00000475772 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
CALD1-217ENST00000475772 FOXD4L1Q9NU39 408 aa19.25■□□□□ 0.67
CALD1-217ENST00000475772 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
CALD1-217ENST00000475772 SOGA1O94964 1423 aa19.22■□□□□ 0.67
CALD1-217ENST00000475772 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
CALD1-217ENST00000475772 FBLN2P98095 1184 aa19.2■□□□□ 0.66
CALD1-217ENST00000475772 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
CALD1-217ENST00000475772 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
CALD1-217ENST00000475772 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
CALD1-217ENST00000475772 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms