RNA–Protein interactions for RNA: ENST00000475390.1

SLITRK3-202, Transcript of SLIT and NTRK like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK3, Length 4,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK3-202ENST00000475390 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
SLITRK3-202ENST00000475390 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
SLITRK3-202ENST00000475390 MIER1Q8N108 512 aa13.12□□□□□ -0.31
SLITRK3-202ENST00000475390 KANK4Q5T7N3 995 aaPredicted RBP13.12□□□□□ -0.31
SLITRK3-202ENST00000475390 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
SLITRK3-202ENST00000475390 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
SLITRK3-202ENST00000475390 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
SLITRK3-202ENST00000475390 NESP48681 1621 aa13.1□□□□□ -0.31
SLITRK3-202ENST00000475390 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
SLITRK3-202ENST00000475390 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
SLITRK3-202ENST00000475390 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
SLITRK3-202ENST00000475390 POLA1P09884 1462 aaPredicted RBP13.08□□□□□ -0.32
SLITRK3-202ENST00000475390 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
SLITRK3-202ENST00000475390 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
SLITRK3-202ENST00000475390 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
SLITRK3-202ENST00000475390 FBLN2P98095 1184 aa13.06□□□□□ -0.32
SLITRK3-202ENST00000475390 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
SLITRK3-202ENST00000475390 GAPVD1Q14C86 1478 aa13.05□□□□□ -0.32
SLITRK3-202ENST00000475390 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
SLITRK3-202ENST00000475390 FHOD3Q2V2M9 1422 aa13.01□□□□□ -0.33
SLITRK3-202ENST00000475390 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
SLITRK3-202ENST00000475390 CUL7Q14999 1698 aa12.98□□□□□ -0.33
SLITRK3-202ENST00000475390 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
SLITRK3-202ENST00000475390 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.34
SLITRK3-202ENST00000475390 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
SLITRK3-202ENST00000475390 ANP32CO43423 234 aa12.95□□□□□ -0.34
SLITRK3-202ENST00000475390 SETD5Q9C0A6 1442 aa12.95□□□□□ -0.34
SLITRK3-202ENST00000475390 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
SLITRK3-202ENST00000475390 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
SLITRK3-202ENST00000475390 CASKIN1Q8WXD9 1431 aa12.94□□□□□ -0.34
SLITRK3-202ENST00000475390 LRRC9Q6ZRR7 1453 aa12.94□□□□□ -0.34
SLITRK3-202ENST00000475390 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
SLITRK3-202ENST00000475390 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
SLITRK3-202ENST00000475390 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
SLITRK3-202ENST00000475390 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
SLITRK3-202ENST00000475390 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
SLITRK3-202ENST00000475390 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
SLITRK3-202ENST00000475390 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
SLITRK3-202ENST00000475390 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
SLITRK3-202ENST00000475390 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
SLITRK3-202ENST00000475390 AQRO60306 1485 aaKnown RBP eCLIP12.87□□□□□ -0.35
SLITRK3-202ENST00000475390 BCANQ96GW7 911 aa12.85□□□□□ -0.35
SLITRK3-202ENST00000475390 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
SLITRK3-202ENST00000475390 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
SLITRK3-202ENST00000475390 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
SLITRK3-202ENST00000475390 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
SLITRK3-202ENST00000475390 CHIC2Q9UKJ5 165 aa12.84□□□□□ -0.35
SLITRK3-202ENST00000475390 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
SLITRK3-202ENST00000475390 FKBP8Q14318 412 aa12.83□□□□□ -0.36
SLITRK3-202ENST00000475390 ZNF777Q9ULD5 760 aaPredicted RBP12.82□□□□□ -0.36
SLITRK3-202ENST00000475390 PLEKHD1A6NEE1 506 aa12.81□□□□□ -0.36
SLITRK3-202ENST00000475390 PCF11O94913 1555 aaKnown RBP12.81□□□□□ -0.36
SLITRK3-202ENST00000475390 ANP32EQ9BTT0 268 aa12.8□□□□□ -0.36
SLITRK3-202ENST00000475390 RRP7BPQ9NSQ0 103 aa12.8□□□□□ -0.36
SLITRK3-202ENST00000475390 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
SLITRK3-202ENST00000475390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLITRK3-202ENST00000475390 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.36
SLITRK3-202ENST00000475390 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.37
SLITRK3-202ENST00000475390 CFDP1Q9UEE9 299 aaPredicted RBP12.77□□□□□ -0.37
SLITRK3-202ENST00000475390 MYOM3Q5VTT5 1437 aa12.77□□□□□ -0.37
SLITRK3-202ENST00000475390 KIF21AQ7Z4S6 1674 aa12.76□□□□□ -0.37
SLITRK3-202ENST00000475390 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
SLITRK3-202ENST00000475390 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
SLITRK3-202ENST00000475390 SIN3AQ96ST3 1273 aa12.75□□□□□ -0.37
SLITRK3-202ENST00000475390 ABCA5Q8WWZ7 1642 aa12.74□□□□□ -0.37
SLITRK3-202ENST00000475390 NCOA2Q15596 1464 aa12.74□□□□□ -0.37
SLITRK3-202ENST00000475390 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
SLITRK3-202ENST00000475390 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
SLITRK3-202ENST00000475390 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
SLITRK3-202ENST00000475390 JPH4Q96JJ6 628 aa12.73□□□□□ -0.37
SLITRK3-202ENST00000475390 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
SLITRK3-202ENST00000475390 KIAA0586Q9BVV6 1533 aa12.73□□□□□ -0.37
SLITRK3-202ENST00000475390 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
SLITRK3-202ENST00000475390 THOC2Q8NI27 1593 aaKnown RBP12.71□□□□□ -0.38
SLITRK3-202ENST00000475390 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
SLITRK3-202ENST00000475390 SUPT6HQ7KZ85 1726 aaKnown RBP12.69□□□□□ -0.38
SLITRK3-202ENST00000475390 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
SLITRK3-202ENST00000475390 CCER2I3L3R5 266 aa12.68□□□□□ -0.38
SLITRK3-202ENST00000475390 MAGI1Q96QZ7 1491 aaPredicted RBP12.68□□□□□ -0.38
SLITRK3-202ENST00000475390 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
SLITRK3-202ENST00000475390 MIA2Q96PC5 1412 aa12.66□□□□□ -0.38
SLITRK3-202ENST00000475390 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
SLITRK3-202ENST00000475390 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
SLITRK3-202ENST00000475390 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
SLITRK3-202ENST00000475390 WDR62O43379 1518 aa12.65□□□□□ -0.38
SLITRK3-202ENST00000475390 TARBP1Q13395 1621 aaKnown RBP12.65□□□□□ -0.38
SLITRK3-202ENST00000475390 EPRSP07814 1512 aaKnown RBP12.65□□□□□ -0.38
SLITRK3-202ENST00000475390 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
SLITRK3-202ENST00000475390 PPP1R15AO75807 674 aaPredicted RBP12.65□□□□□ -0.38
SLITRK3-202ENST00000475390 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
SLITRK3-202ENST00000475390 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
SLITRK3-202ENST00000475390 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
SLITRK3-202ENST00000475390 HFM1A2PYH4 1435 aa12.63□□□□□ -0.39
SLITRK3-202ENST00000475390 PBRM1Q86U86 1689 aa12.63□□□□□ -0.39
SLITRK3-202ENST00000475390 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLITRK3-202ENST00000475390 SAMD9Q5K651 1589 aa12.62□□□□□ -0.39
SLITRK3-202ENST00000475390 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
SLITRK3-202ENST00000475390 EIF4G2P78344 907 aaKnown RBP eCLIP12.62□□□□□ -0.39
SLITRK3-202ENST00000475390 MPHOSPH9Q99550 1183 aa12.61□□□□□ -0.39
SLITRK3-202ENST00000475390 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms