RNA–Protein interactions for RNA: ENST00000475390.1

SLITRK3-202, Transcript of SLIT and NTRK like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK3, Length 4,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK3-202ENST00000475390 NISCHQ9Y2I1 1504 aa18.46■□□□□ 0.55
SLITRK3-202ENST00000475390 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.15
SLITRK3-202ENST00000475390 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
SLITRK3-202ENST00000475390 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
SLITRK3-202ENST00000475390 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
SLITRK3-202ENST00000475390 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
SLITRK3-202ENST00000475390 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.01
SLITRK3-202ENST00000475390 PELP1Q8IZL8 1130 aaKnown RBP15.02□□□□□ -0.01
SLITRK3-202ENST00000475390 ABCC9O60706 1549 aa15□□□□□ -0.01
SLITRK3-202ENST00000475390 MYT1Q01538 1121 aa14.91□□□□□ -0.02
SLITRK3-202ENST00000475390 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
SLITRK3-202ENST00000475390 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
SLITRK3-202ENST00000475390 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
SLITRK3-202ENST00000475390 NACADO15069 1562 aa14.8□□□□□ -0.04
SLITRK3-202ENST00000475390 HRCP23327 699 aa14.73□□□□□ -0.05
SLITRK3-202ENST00000475390 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
SLITRK3-202ENST00000475390 RB1CC1Q8TDY2 1594 aa14.66□□□□□ -0.06
SLITRK3-202ENST00000475390 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
SLITRK3-202ENST00000475390 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
SLITRK3-202ENST00000475390 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
SLITRK3-202ENST00000475390 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
SLITRK3-202ENST00000475390 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
SLITRK3-202ENST00000475390 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
SLITRK3-202ENST00000475390 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
SLITRK3-202ENST00000475390 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
SLITRK3-202ENST00000475390 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
SLITRK3-202ENST00000475390 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
SLITRK3-202ENST00000475390 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
SLITRK3-202ENST00000475390 PPARGC1BQ86YN6 1023 aaKnown RBP14.17□□□□□ -0.14
SLITRK3-202ENST00000475390 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
SLITRK3-202ENST00000475390 WIZO95785 1651 aa14.11□□□□□ -0.15
SLITRK3-202ENST00000475390 UBTFP17480 764 aaKnown RBP14.08□□□□□ -0.15
SLITRK3-202ENST00000475390 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
SLITRK3-202ENST00000475390 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
SLITRK3-202ENST00000475390 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
SLITRK3-202ENST00000475390 APLP2Q06481 763 aa14.02□□□□□ -0.16
SLITRK3-202ENST00000475390 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
SLITRK3-202ENST00000475390 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
SLITRK3-202ENST00000475390 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
SLITRK3-202ENST00000475390 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
SLITRK3-202ENST00000475390 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
SLITRK3-202ENST00000475390 EEA1Q15075 1411 aa13.92□□□□□ -0.18
SLITRK3-202ENST00000475390 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
SLITRK3-202ENST00000475390 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
SLITRK3-202ENST00000475390 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
SLITRK3-202ENST00000475390 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.2
SLITRK3-202ENST00000475390 RANGAP1P46060 587 aaPredicted RBP13.8□□□□□ -0.2
SLITRK3-202ENST00000475390 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
SLITRK3-202ENST00000475390 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
SLITRK3-202ENST00000475390 TNIKQ9UKE5 1360 aa13.73□□□□□ -0.21
SLITRK3-202ENST00000475390 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
SLITRK3-202ENST00000475390 SOGA1O94964 1423 aa13.69□□□□□ -0.22
SLITRK3-202ENST00000475390 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
SLITRK3-202ENST00000475390 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
SLITRK3-202ENST00000475390 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
SLITRK3-202ENST00000475390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
SLITRK3-202ENST00000475390 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
SLITRK3-202ENST00000475390 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
SLITRK3-202ENST00000475390 ACIN1Q9UKV3 1341 aaKnown RBP13.65□□□□□ -0.22
SLITRK3-202ENST00000475390 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
SLITRK3-202ENST00000475390 CLIP1P30622 1438 aa13.59□□□□□ -0.23
SLITRK3-202ENST00000475390 HMGXB3Q12766 1538 aa13.58□□□□□ -0.23
SLITRK3-202ENST00000475390 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
SLITRK3-202ENST00000475390 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
SLITRK3-202ENST00000475390 GTF3C3Q9Y5Q9 886 aa13.54□□□□□ -0.24
SLITRK3-202ENST00000475390 YTHDC1Q96MU7 727 aaKnown RBP13.53□□□□□ -0.24
SLITRK3-202ENST00000475390 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
SLITRK3-202ENST00000475390 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
SLITRK3-202ENST00000475390 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
SLITRK3-202ENST00000475390 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
SLITRK3-202ENST00000475390 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
SLITRK3-202ENST00000475390 SYNJ1O43426 1573 aa13.46□□□□□ -0.25
SLITRK3-202ENST00000475390 CFTRP13569 1480 aa13.44□□□□□ -0.26
SLITRK3-202ENST00000475390 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
SLITRK3-202ENST00000475390 KIF21BO75037 1637 aa13.41□□□□□ -0.26
SLITRK3-202ENST00000475390 NEUROD1Q13562 356 aa13.41□□□□□ -0.26
SLITRK3-202ENST00000475390 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
SLITRK3-202ENST00000475390 CUX2O14529 1486 aa13.4□□□□□ -0.26
SLITRK3-202ENST00000475390 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
SLITRK3-202ENST00000475390 CLSPNQ9HAW4 1339 aa13.37□□□□□ -0.27
SLITRK3-202ENST00000475390 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
SLITRK3-202ENST00000475390 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
SLITRK3-202ENST00000475390 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
SLITRK3-202ENST00000475390 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
SLITRK3-202ENST00000475390 ITGAEP38570 1179 aa13.32□□□□□ -0.28
SLITRK3-202ENST00000475390 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
SLITRK3-202ENST00000475390 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
SLITRK3-202ENST00000475390 CUX1P39880 1505 aa13.3□□□□□ -0.28
SLITRK3-202ENST00000475390 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
SLITRK3-202ENST00000475390 NEFLP07196 543 aa13.29□□□□□ -0.28
SLITRK3-202ENST00000475390 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
SLITRK3-202ENST00000475390 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
SLITRK3-202ENST00000475390 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
SLITRK3-202ENST00000475390 FAM50AQ14320 339 aaKnown RBP13.25□□□□□ -0.29
SLITRK3-202ENST00000475390 BCL11AQ9H165 835 aa13.25□□□□□ -0.29
SLITRK3-202ENST00000475390 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
SLITRK3-202ENST00000475390 IGF1RP08069 1367 aa13.23□□□□□ -0.29
SLITRK3-202ENST00000475390 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
SLITRK3-202ENST00000475390 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
SLITRK3-202ENST00000475390 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms