RNA–Protein interactions for RNA: ENST00000474378.1

PABPC4-211, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-211ENST00000474378 CUX1P39880 1505 aa8.65□□□□□ -1.02
PABPC4-211ENST00000474378 WRNQ14191 1432 aaPredicted RBP eCLIP8.65□□□□□ -1.02
PABPC4-211ENST00000474378 FBXO3Q9UK99 471 aa8.65□□□□□ -1.02
PABPC4-211ENST00000474378 ZBTB12Q9Y330 459 aaPredicted RBP8.64□□□□□ -1.03
PABPC4-211ENST00000474378 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
PABPC4-211ENST00000474378 URB2Q14146 1524 aaKnown RBP8.63□□□□□ -1.03
PABPC4-211ENST00000474378 DSG3P32926 999 aa8.62□□□□□ -1.03
PABPC4-211ENST00000474378 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
PABPC4-211ENST00000474378 WDR97A6NE52 1622 aa8.61□□□□□ -1.03
PABPC4-211ENST00000474378 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
PABPC4-211ENST00000474378 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
PABPC4-211ENST00000474378 FGD5Q6ZNL6 1462 aa8.57□□□□□ -1.04
PABPC4-211ENST00000474378 TARBP1Q13395 1621 aaKnown RBP8.56□□□□□ -1.04
PABPC4-211ENST00000474378 VASPP50552 380 aaPredicted RBP8.55□□□□□ -1.04
PABPC4-211ENST00000474378 ABCA10Q8WWZ4 1543 aa8.54□□□□□ -1.04
PABPC4-211ENST00000474378 CUX2O14529 1486 aa8.53□□□□□ -1.04
PABPC4-211ENST00000474378 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
PABPC4-211ENST00000474378 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
PABPC4-211ENST00000474378 OSCARQ8IYS5 282 aa8.51□□□□□ -1.05
PABPC4-211ENST00000474378 EEA1Q15075 1411 aa8.51□□□□□ -1.05
PABPC4-211ENST00000474378 IFT140Q96RY7 1462 aa8.5□□□□□ -1.05
PABPC4-211ENST00000474378 ZNF692Q9BU19 519 aaPredicted RBP8.49□□□□□ -1.05
PABPC4-211ENST00000474378 IFNLR1Q8IU57 520 aaPredicted RBP8.48□□□□□ -1.05
PABPC4-211ENST00000474378 EIF4G3O43432 1585 aaKnown RBP8.47□□□□□ -1.05
PABPC4-211ENST00000474378 TRIM41Q8WV44 630 aa8.46□□□□□ -1.06
PABPC4-211ENST00000474378 ERICH3Q5RHP9 1530 aa8.45□□□□□ -1.06
PABPC4-211ENST00000474378 SPDYE2BA6NHP3 402 aa8.45□□□□□ -1.06
PABPC4-211ENST00000474378 SPDYE6P0CI01 402 aa8.45□□□□□ -1.06
PABPC4-211ENST00000474378 CACNB1Q02641 598 aaPredicted RBP8.45□□□□□ -1.06
PABPC4-211ENST00000474378 SPDYE2Q495Y8 402 aa8.45□□□□□ -1.06
PABPC4-211ENST00000474378 SOGA1O94964 1423 aa8.45□□□□□ -1.06
PABPC4-211ENST00000474378 RAD54L2Q9Y4B4 1467 aa8.45□□□□□ -1.06
PABPC4-211ENST00000474378 KIF21BO75037 1637 aa8.44□□□□□ -1.06
PABPC4-211ENST00000474378 CUL7Q14999 1698 aa8.44□□□□□ -1.06
PABPC4-211ENST00000474378 PBRM1Q86U86 1689 aa8.44□□□□□ -1.06
PABPC4-211ENST00000474378 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
PABPC4-211ENST00000474378 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
PABPC4-211ENST00000474378 ADAMTS12P58397 1594 aa8.42□□□□□ -1.06
PABPC4-211ENST00000474378 RUSC2Q8N2Y8 1516 aa8.41□□□□□ -1.06
PABPC4-211ENST00000474378 PRXQ9BXM0 1461 aa8.41□□□□□ -1.06
PABPC4-211ENST00000474378 ZNF608Q9ULD9 1512 aaPredicted RBP8.4□□□□□ -1.06
PABPC4-211ENST00000474378 GAPVD1Q14C86 1478 aa8.4□□□□□ -1.06
PABPC4-211ENST00000474378 GRIN2BQ13224 1484 aa8.38□□□□□ -1.07
PABPC4-211ENST00000474378 MAGI1Q96QZ7 1491 aaPredicted RBP8.38□□□□□ -1.07
PABPC4-211ENST00000474378 IGF1RP08069 1367 aa8.35□□□□□ -1.07
PABPC4-211ENST00000474378 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
PABPC4-211ENST00000474378 AQRO60306 1485 aaKnown RBP eCLIP8.34□□□□□ -1.073e-8■■■■■ 36.9
PABPC4-211ENST00000474378 GOLGA3Q08378 1498 aa8.34□□□□□ -1.07
PABPC4-211ENST00000474378 TDRD9Q8NDG6 1382 aaKnown RBP8.34□□□□□ -1.07
PABPC4-211ENST00000474378 SNAPC4Q5SXM2 1469 aa8.33□□□□□ -1.08
PABPC4-211ENST00000474378 FHAD1B1AJZ9 1412 aa8.33□□□□□ -1.08
PABPC4-211ENST00000474378 PKD2Q13563 968 aa8.33□□□□□ -1.08
PABPC4-211ENST00000474378 KLHL34Q8N239 644 aa8.33□□□□□ -1.08
PABPC4-211ENST00000474378 SYNJ2O15056 1496 aa8.32□□□□□ -1.08
PABPC4-211ENST00000474378 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
PABPC4-211ENST00000474378 CTTNBP2Q8WZ74 1663 aa8.3□□□□□ -1.08
PABPC4-211ENST00000474378 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
PABPC4-211ENST00000474378 SPOCK2Q92563 424 aa8.3□□□□□ -1.08
PABPC4-211ENST00000474378 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
PABPC4-211ENST00000474378 CARMIL1Q5VZK9 1371 aa8.28□□□□□ -1.08
PABPC4-211ENST00000474378 HRCP23327 699 aa8.28□□□□□ -1.08
PABPC4-211ENST00000474378 MIER1Q8N108 512 aa8.28□□□□□ -1.08
PABPC4-211ENST00000474378 CHD1O14646 1710 aa8.28□□□□□ -1.08
PABPC4-211ENST00000474378 NUP160Q12769 1436 aa8.28□□□□□ -1.08
PABPC4-211ENST00000474378 CEP170Q5SW79 1584 aa8.27□□□□□ -1.09
PABPC4-211ENST00000474378 TNIKQ9UKE5 1360 aa8.25□□□□□ -1.09
PABPC4-211ENST00000474378 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
PABPC4-211ENST00000474378 IQGAP2Q13576 1575 aa8.24□□□□□ -1.09
PABPC4-211ENST00000474378 SAMD9Q5K651 1589 aa8.24□□□□□ -1.09
PABPC4-211ENST00000474378 SHROOM2Q13796 1616 aa8.24□□□□□ -1.09
PABPC4-211ENST00000474378 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
PABPC4-211ENST00000474378 UGGT2Q9NYU1 1516 aa8.23□□□□□ -1.09
PABPC4-211ENST00000474378 KIAA0586Q9BVV6 1533 aa8.22□□□□□ -1.09
PABPC4-211ENST00000474378 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
PABPC4-211ENST00000474378 FAM9AQ8IZU1 332 aaPredicted RBP8.2□□□□□ -1.1
PABPC4-211ENST00000474378 CEP162Q5TB80 1403 aa8.2□□□□□ -1.1
PABPC4-211ENST00000474378 PLCB2Q00722 1185 aa8.19□□□□□ -1.1
PABPC4-211ENST00000474378 KIAA0556O60303 1618 aa8.18□□□□□ -1.1
PABPC4-211ENST00000474378 PLEKHG5O94827 1062 aa8.17□□□□□ -1.1
PABPC4-211ENST00000474378 ARHGAP35Q9NRY4 1499 aa8.17□□□□□ -1.1
PABPC4-211ENST00000474378 DISP1Q96F81 1524 aa8.15□□□□□ -1.1
PABPC4-211ENST00000474378 ARAP1Q96P48 1450 aa8.15□□□□□ -1.1
PABPC4-211ENST00000474378 CLIP1P30622 1438 aa8.15□□□□□ -1.1
PABPC4-211ENST00000474378 RBM42Q9BTD8 480 aaKnown RBP8.15□□□□□ -1.1
PABPC4-211ENST00000474378 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.1
PABPC4-211ENST00000474378 AKT1S1Q96B36 256 aa8.14□□□□□ -1.11
PABPC4-211ENST00000474378 RGL2O15211 777 aa8.13□□□□□ -1.11
PABPC4-211ENST00000474378 CIZ1Q9ULV3 898 aaPredicted RBP8.13□□□□□ -1.11
PABPC4-211ENST00000474378 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
PABPC4-211ENST00000474378 SPDYE1Q8NFV5 336 aaPredicted RBP8.12□□□□□ -1.11
PABPC4-211ENST00000474378 CHMP7Q8WUX9 453 aaPredicted RBP8.12□□□□□ -1.11
PABPC4-211ENST00000474378 CLEC11AQ9Y240 323 aa8.11□□□□□ -1.11
PABPC4-211ENST00000474378 VPS8Q8N3P4 1428 aa8.11□□□□□ -1.11
PABPC4-211ENST00000474378 PCF11O94913 1555 aaKnown RBP8.1□□□□□ -1.11
PABPC4-211ENST00000474378 NPM1P06748 294 aaKnown RBP eCLIP8.1□□□□□ -1.11
PABPC4-211ENST00000474378 FYCO1Q9BQS8 1478 aa8.09□□□□□ -1.11
PABPC4-211ENST00000474378 HAP1P54257 671 aaPredicted RBP8.09□□□□□ -1.11
PABPC4-211ENST00000474378 REM2Q8IYK8 340 aaPredicted RBP8.09□□□□□ -1.11
PABPC4-211ENST00000474378 CFAP43Q8NDM7 1665 aa8.08□□□□□ -1.12
PABPC4-211ENST00000474378 UBTFP17480 764 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms