RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 PHLDB1Q86UU1 1377 aa29.53■■■□□ 2.32
FSCN1-205ENST00000473330 SUPT16HQ9Y5B9 1047 aaKnown RBP29.49■■■□□ 2.31
FSCN1-205ENST00000473330 FHAD1B1AJZ9 1412 aa29.47■■■□□ 2.31
FSCN1-205ENST00000473330 CFAP43Q8NDM7 1665 aa29.46■■■□□ 2.31
FSCN1-205ENST00000473330 PCF11O94913 1555 aaKnown RBP29.43■■■□□ 2.3
FSCN1-205ENST00000473330 FAM50AQ14320 339 aaKnown RBP29.39■■■□□ 2.3
FSCN1-205ENST00000473330 P3H3Q8IVL6 736 aa29.37■■■□□ 2.29
FSCN1-205ENST00000473330 WDR97A6NE52 1622 aa29.36■■■□□ 2.29
FSCN1-205ENST00000473330 SIN3AQ96ST3 1273 aa29.35■■■□□ 2.29
FSCN1-205ENST00000473330 KCNH8Q96L42 1107 aa29.35■■■□□ 2.29
FSCN1-205ENST00000473330 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
FSCN1-205ENST00000473330 FHOD3Q2V2M9 1422 aa29.3■■■□□ 2.28
FSCN1-205ENST00000473330 FYCO1Q9BQS8 1478 aa29.28■■■□□ 2.28
FSCN1-205ENST00000473330 ATP1B4Q9UN42 357 aaPredicted RBP29.28■■■□□ 2.28
FSCN1-205ENST00000473330 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.28
FSCN1-205ENST00000473330 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
FSCN1-205ENST00000473330 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
FSCN1-205ENST00000473330 DNMBPQ6XZF7 1577 aa29.25■■■□□ 2.27
FSCN1-205ENST00000473330 TIMELESSQ9UNS1 1208 aa29.25■■■□□ 2.27
FSCN1-205ENST00000473330 CASKIN1Q8WXD9 1431 aa29.25■■■□□ 2.27
FSCN1-205ENST00000473330 AQRO60306 1485 aaKnown RBP eCLIP29.22■■■□□ 2.272e-6■■■□□ 15.1
FSCN1-205ENST00000473330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.22■■■□□ 2.27
FSCN1-205ENST00000473330 DDX10Q13206 875 aaKnown RBP29.22■■■□□ 2.27
FSCN1-205ENST00000473330 CC2D2AQ9P2K1 1620 aa29.22■■■□□ 2.27
FSCN1-205ENST00000473330 POLA1P09884 1462 aaPredicted RBP29.2■■■□□ 2.26
FSCN1-205ENST00000473330 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
FSCN1-205ENST00000473330 PPP1R15AO75807 674 aaPredicted RBP29.17■■■□□ 2.26
FSCN1-205ENST00000473330 CUL7Q14999 1698 aa29.16■■■□□ 2.26
FSCN1-205ENST00000473330 CTTNBP2Q8WZ74 1663 aa29.15■■■□□ 2.26
FSCN1-205ENST00000473330 FGD6Q6ZV73 1430 aa29.09■■■□□ 2.25
FSCN1-205ENST00000473330 FMN1Q68DA7 1419 aa29.08■■■□□ 2.25
FSCN1-205ENST00000473330 TSHZ2Q9NRE2 1034 aa29.07■■■□□ 2.24
FSCN1-205ENST00000473330 SNAPC4Q5SXM2 1469 aa29.07■■■□□ 2.24
FSCN1-205ENST00000473330 HIRIP3Q9BW71 556 aaPredicted RBP29.05■■■□□ 2.24
FSCN1-205ENST00000473330 NESP48681 1621 aa29.03■■■□□ 2.24
FSCN1-205ENST00000473330 CCDC18Q5T9S5 1454 aa29■■■□□ 2.23
FSCN1-205ENST00000473330 PTPRKQ15262 1439 aa28.99■■■□□ 2.23
FSCN1-205ENST00000473330 HFM1A2PYH4 1435 aa28.97■■■□□ 2.23
FSCN1-205ENST00000473330 MTUS2Q5JR59 1369 aa28.97■■■□□ 2.23
FSCN1-205ENST00000473330 CCER2I3L3R5 266 aa28.97■■■□□ 2.23
FSCN1-205ENST00000473330 LRRIQ1Q96JM4 1722 aa28.96■■■□□ 2.23
FSCN1-205ENST00000473330 SAMD9Q5K651 1589 aa28.95■■■□□ 2.23
FSCN1-205ENST00000473330 UACAQ9BZF9 1416 aa28.95■■■□□ 2.22
FSCN1-205ENST00000473330 PTPN23Q9H3S7 1636 aa28.95■■■□□ 2.22
FSCN1-205ENST00000473330 TONSLQ96HA7 1378 aa28.94■■■□□ 2.22
FSCN1-205ENST00000473330 ANP32CO43423 234 aa28.92■■■□□ 2.22
FSCN1-205ENST00000473330 FKBP8Q14318 412 aa28.91■■■□□ 2.22
FSCN1-205ENST00000473330 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
FSCN1-205ENST00000473330 NCOA2Q15596 1464 aa28.89■■■□□ 2.22
FSCN1-205ENST00000473330 GRIN2BQ13224 1484 aa28.89■■■□□ 2.22
FSCN1-205ENST00000473330 BCANQ96GW7 911 aa28.89■■■□□ 2.21
FSCN1-205ENST00000473330 NAIPQ13075 1403 aa28.88■■■□□ 2.21
FSCN1-205ENST00000473330 MYOM3Q5VTT5 1437 aa28.88■■■□□ 2.21
FSCN1-205ENST00000473330 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
FSCN1-205ENST00000473330 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
FSCN1-205ENST00000473330 THOC2Q8NI27 1593 aaKnown RBP28.83■■■□□ 2.21
FSCN1-205ENST00000473330 SUPT6HQ7KZ85 1726 aaKnown RBP28.82■■■□□ 2.2
FSCN1-205ENST00000473330 TRIM52Q96A61 297 aa28.81■■■□□ 2.2
FSCN1-205ENST00000473330 GAPVD1Q14C86 1478 aa28.8■■■□□ 2.2
FSCN1-205ENST00000473330 LAMC3Q9Y6N6 1575 aa28.8■■■□□ 2.2
FSCN1-205ENST00000473330 EHBP1L1Q8N3D4 1523 aa28.79■■■□□ 2.2
FSCN1-205ENST00000473330 KDM5BQ9UGL1 1544 aa28.78■■■□□ 2.2
FSCN1-205ENST00000473330 UGGT2Q9NYU1 1516 aa28.76■■■□□ 2.19
FSCN1-205ENST00000473330 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
FSCN1-205ENST00000473330 MAGI3Q5TCQ9 1506 aa28.72■■■□□ 2.19
FSCN1-205ENST00000473330 NEFLP07196 543 aa28.71■■■□□ 2.19
FSCN1-205ENST00000473330 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
FSCN1-205ENST00000473330 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
FSCN1-205ENST00000473330 DENND4BO75064 1496 aaPredicted RBP28.64■■■□□ 2.17
FSCN1-205ENST00000473330 RRP7BPQ9NSQ0 103 aa28.63■■■□□ 2.17
FSCN1-205ENST00000473330 GCC2Q8IWJ2 1684 aa28.63■■■□□ 2.17
FSCN1-205ENST00000473330 ANP32EQ9BTT0 268 aa28.61■■■□□ 2.17
FSCN1-205ENST00000473330 HECW1Q76N89 1606 aa28.6■■■□□ 2.17
FSCN1-205ENST00000473330 CHIC2Q9UKJ5 165 aa28.59■■■□□ 2.17
FSCN1-205ENST00000473330 PDS5BQ9NTI5 1447 aa28.59■■■□□ 2.17
FSCN1-205ENST00000473330 TARBP1Q13395 1621 aaKnown RBP28.57■■■□□ 2.16
FSCN1-205ENST00000473330 KDM6BO15054 1643 aa28.56■■■□□ 2.16
FSCN1-205ENST00000473330 AKNAQ7Z591 1439 aa28.56■■■□□ 2.16
FSCN1-205ENST00000473330 HSPA5P11021 654 aaKnown RBP28.55■■■□□ 2.16
FSCN1-205ENST00000473330 WASHC2AQ641Q2 1341 aa28.55■■■□□ 2.16
FSCN1-205ENST00000473330 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
FSCN1-205ENST00000473330 MIA2Q96PC5 1412 aa28.49■■■□□ 2.15
FSCN1-205ENST00000473330 RBM19Q9Y4C8 960 aaKnown RBP28.49■■■□□ 2.15
FSCN1-205ENST00000473330 HNRNPUQ00839 825 aaKnown RBP eCLIP28.48■■■□□ 2.15
FSCN1-205ENST00000473330 IQGAP2Q13576 1575 aa28.47■■■□□ 2.15
FSCN1-205ENST00000473330 MPHOSPH9Q99550 1183 aa28.47■■■□□ 2.15
FSCN1-205ENST00000473330 PBRM1Q86U86 1689 aa28.47■■■□□ 2.15
FSCN1-205ENST00000473330 CDK13Q14004 1512 aaKnown RBP28.46■■■□□ 2.15
FSCN1-205ENST00000473330 EIF4G2P78344 907 aaKnown RBP eCLIP28.45■■■□□ 2.15
FSCN1-205ENST00000473330 WDR62O43379 1518 aa28.42■■■□□ 2.14
FSCN1-205ENST00000473330 L3MBTL2Q969R5 705 aa28.41■■■□□ 2.14
FSCN1-205ENST00000473330 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
FSCN1-205ENST00000473330 CNTLNQ9NXG0 1405 aa28.39■■■□□ 2.14
FSCN1-205ENST00000473330 ADAMTS12P58397 1594 aa28.39■■■□□ 2.13
FSCN1-205ENST00000473330 FOXD1Q16676 465 aa28.37■■■□□ 2.13
FSCN1-205ENST00000473330 ARID3CA6NKF2 412 aa28.34■■■□□ 2.13
FSCN1-205ENST00000473330 C11orf95C9JLR9 678 aaPredicted RBP28.34■■■□□ 2.13
FSCN1-205ENST00000473330 NCOA1Q15788 1441 aa28.33■■■□□ 2.13
FSCN1-205ENST00000473330 CCDC184Q52MB2 194 aa28.33■■■□□ 2.12
FSCN1-205ENST00000473330 DAPK1P53355 1430 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms