RNA–Protein interactions for RNA: ENST00000469404.1

NCK1-204, Transcript of NCK adaptor protein 1, humanhuman

TSL 2 BASIC

Gene NCK1, Length 2,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-204ENST00000469404 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
NCK1-204ENST00000469404 TOPBP1Q92547 1522 aa7.36□□□□□ -1.23
NCK1-204ENST00000469404 MRC2Q9UBG0 1479 aa7.35□□□□□ -1.23
NCK1-204ENST00000469404 TDRD9Q8NDG6 1382 aaKnown RBP7.35□□□□□ -1.23
NCK1-204ENST00000469404 RUSC2Q8N2Y8 1516 aa7.35□□□□□ -1.23
NCK1-204ENST00000469404 FBLN2P98095 1184 aa7.35□□□□□ -1.23
NCK1-204ENST00000469404 POLA1P09884 1462 aaPredicted RBP7.34□□□□□ -1.24
NCK1-204ENST00000469404 TOP2BQ02880 1626 aa7.32□□□□□ -1.24
NCK1-204ENST00000469404 CUX2O14529 1486 aa7.32□□□□□ -1.24
NCK1-204ENST00000469404 DNMBPQ6XZF7 1577 aa7.32□□□□□ -1.24
NCK1-204ENST00000469404 REM2Q8IYK8 340 aaPredicted RBP7.31□□□□□ -1.24
NCK1-204ENST00000469404 AQRO60306 1485 aaKnown RBP eCLIP7.31□□□□□ -1.24
NCK1-204ENST00000469404 THOC2Q8NI27 1593 aaKnown RBP7.31□□□□□ -1.24
NCK1-204ENST00000469404 ZNF608Q9ULD9 1512 aaPredicted RBP7.3□□□□□ -1.24
NCK1-204ENST00000469404 UBTFP17480 764 aaKnown RBP7.29□□□□□ -1.24
NCK1-204ENST00000469404 C19orf67A6NJJ6 358 aa7.28□□□□□ -1.24
NCK1-204ENST00000469404 BIVM-ERCC5R4GMW8 1640 aa7.28□□□□□ -1.24
NCK1-204ENST00000469404 TTBK1Q5TCY1 1321 aaPredicted RBP7.28□□□□□ -1.24
NCK1-204ENST00000469404 WDR62O43379 1518 aa7.28□□□□□ -1.24
NCK1-204ENST00000469404 CSRNP3Q8WYN3 585 aa7.26□□□□□ -1.25
NCK1-204ENST00000469404 KIF27Q86VH2 1401 aa7.25□□□□□ -1.25
NCK1-204ENST00000469404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.25□□□□□ -1.25
NCK1-204ENST00000469404 HNRNPUL2Q1KMD3 747 aaKnown RBP7.25□□□□□ -1.25
NCK1-204ENST00000469404 GAPVD1Q14C86 1478 aa7.23□□□□□ -1.25
NCK1-204ENST00000469404 CHMP7Q8WUX9 453 aaPredicted RBP7.22□□□□□ -1.25
NCK1-204ENST00000469404 IFT140Q96RY7 1462 aa7.22□□□□□ -1.25
NCK1-204ENST00000469404 TARBP1Q13395 1621 aaKnown RBP7.22□□□□□ -1.25
NCK1-204ENST00000469404 CLCN6P51797 869 aa7.21□□□□□ -1.25
NCK1-204ENST00000469404 EIF4G3O43432 1585 aaKnown RBP7.21□□□□□ -1.26
NCK1-204ENST00000469404 ABCA10Q8WWZ4 1543 aa7.21□□□□□ -1.26
NCK1-204ENST00000469404 PITPNM1O00562 1244 aa7.21□□□□□ -1.26
NCK1-204ENST00000469404 P3H3Q8IVL6 736 aa7.2□□□□□ -1.26
NCK1-204ENST00000469404 IGF1RP08069 1367 aa7.2□□□□□ -1.26
NCK1-204ENST00000469404 RAPGEF2Q9Y4G8 1499 aa7.2□□□□□ -1.26
NCK1-204ENST00000469404 SNAPC4Q5SXM2 1469 aa7.19□□□□□ -1.26
NCK1-204ENST00000469404 CARMIL1Q5VZK9 1371 aa7.19□□□□□ -1.26
NCK1-204ENST00000469404 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
NCK1-204ENST00000469404 NCBP3Q53F19 620 aaKnown RBP7.17□□□□□ -1.26
NCK1-204ENST00000469404 WDR97A6NE52 1622 aa7.17□□□□□ -1.26
NCK1-204ENST00000469404 GRIN2BQ13224 1484 aa7.16□□□□□ -1.26
NCK1-204ENST00000469404 ATP1B4Q9UN42 357 aaPredicted RBP7.16□□□□□ -1.26
NCK1-204ENST00000469404 PBRM1Q86U86 1689 aa7.16□□□□□ -1.26
NCK1-204ENST00000469404 ABCA5Q8WWZ7 1642 aa7.16□□□□□ -1.26
NCK1-204ENST00000469404 ARID3CA6NKF2 412 aa7.16□□□□□ -1.26
NCK1-204ENST00000469404 EEA1Q15075 1411 aa7.14□□□□□ -1.27
NCK1-204ENST00000469404 GOLGA3Q08378 1498 aa7.13□□□□□ -1.27
NCK1-204ENST00000469404 POTEIP0CG38 1075 aa7.13□□□□□ -1.27
NCK1-204ENST00000469404 FHAD1B1AJZ9 1412 aa7.11□□□□□ -1.27
NCK1-204ENST00000469404 PRXQ9BXM0 1461 aa7.11□□□□□ -1.27
NCK1-204ENST00000469404 ERICH3Q5RHP9 1530 aa7.11□□□□□ -1.27
NCK1-204ENST00000469404 OTUD5Q96G74 571 aa7.1□□□□□ -1.27
NCK1-204ENST00000469404 ADAMTS12P58397 1594 aa7.1□□□□□ -1.27
NCK1-204ENST00000469404 CHD1O14646 1710 aa7.09□□□□□ -1.27
NCK1-204ENST00000469404 SYNJ2O15056 1496 aa7.09□□□□□ -1.27
NCK1-204ENST00000469404 GRIN2AQ12879 1464 aa7.09□□□□□ -1.27
NCK1-204ENST00000469404 CEP162Q5TB80 1403 aa7.09□□□□□ -1.27
NCK1-204ENST00000469404 SAMD1Q6SPF0 538 aaPredicted RBP7.09□□□□□ -1.27
NCK1-204ENST00000469404 MAGI1Q96QZ7 1491 aaPredicted RBP7.09□□□□□ -1.28
NCK1-204ENST00000469404 CUL7Q14999 1698 aa7.08□□□□□ -1.28
NCK1-204ENST00000469404 KIF21BO75037 1637 aa7.07□□□□□ -1.28
NCK1-204ENST00000469404 OSCARQ8IYS5 282 aa7.07□□□□□ -1.28
NCK1-204ENST00000469404 CLIP1P30622 1438 aa7.07□□□□□ -1.28
NCK1-204ENST00000469404 CEP170Q5SW79 1584 aa7.06□□□□□ -1.28
NCK1-204ENST00000469404 JPH4Q96JJ6 628 aa7.06□□□□□ -1.28
NCK1-204ENST00000469404 ZBTB12Q9Y330 459 aaPredicted RBP7.06□□□□□ -1.28
NCK1-204ENST00000469404 FHOD3Q2V2M9 1422 aa7.05□□□□□ -1.28
NCK1-204ENST00000469404 KCNA4P22459 653 aa7.05□□□□□ -1.28
NCK1-204ENST00000469404 TNIKQ9UKE5 1360 aa7.05□□□□□ -1.28
NCK1-204ENST00000469404 PRKAR2AP13861 404 aaKnown RBP7.02□□□□□ -1.29
NCK1-204ENST00000469404 IQGAP2Q13576 1575 aa7.02□□□□□ -1.29
NCK1-204ENST00000469404 CTTNBP2Q8WZ74 1663 aa7.02□□□□□ -1.29
NCK1-204ENST00000469404 PRG4Q92954 1404 aaPredicted RBP7.01□□□□□ -1.29
NCK1-204ENST00000469404 CYB5RLQ6IPT4 315 aa7.01□□□□□ -1.29
NCK1-204ENST00000469404 ERCC6L2Q5T890 1561 aa7□□□□□ -1.29
NCK1-204ENST00000469404 ARAP1Q96P48 1450 aa7□□□□□ -1.29
NCK1-204ENST00000469404 ARHGAP35Q9NRY4 1499 aa7□□□□□ -1.29
NCK1-204ENST00000469404 KIAA0586Q9BVV6 1533 aa6.99□□□□□ -1.29
NCK1-204ENST00000469404 NUP160Q12769 1436 aa6.99□□□□□ -1.29
NCK1-204ENST00000469404 POLA2Q14181 598 aa6.98□□□□□ -1.29
NCK1-204ENST00000469404 DCBLD2Q96PD2 775 aa6.98□□□□□ -1.29
NCK1-204ENST00000469404 NPM3O75607 178 aaKnown RBP6.97□□□□□ -1.29
NCK1-204ENST00000469404 CARMIL2Q6F5E8 1435 aa6.96□□□□□ -1.29
NCK1-204ENST00000469404 DISP1Q96F81 1524 aa6.95□□□□□ -1.3
NCK1-204ENST00000469404 PLB1Q6P1J6 1458 aa6.95□□□□□ -1.3
NCK1-204ENST00000469404 PTPRGP23470 1445 aa6.94□□□□□ -1.3
NCK1-204ENST00000469404 KCNH8Q96L42 1107 aa6.94□□□□□ -1.3
NCK1-204ENST00000469404 KANK4Q5T7N3 995 aaPredicted RBP6.93□□□□□ -1.3
NCK1-204ENST00000469404 KIAA0556O60303 1618 aa6.93□□□□□ -1.3
NCK1-204ENST00000469404 VPS8Q8N3P4 1428 aa6.93□□□□□ -1.3
NCK1-204ENST00000469404 CLASP1Q7Z460 1538 aa6.93□□□□□ -1.3
NCK1-204ENST00000469404 PCF11O94913 1555 aaKnown RBP6.92□□□□□ -1.3
NCK1-204ENST00000469404 ITGAEP38570 1179 aa6.92□□□□□ -1.3
NCK1-204ENST00000469404 ARHGEF11O15085 1522 aa6.91□□□□□ -1.3
NCK1-204ENST00000469404 CDK13Q14004 1512 aaKnown RBP6.91□□□□□ -1.3
NCK1-204ENST00000469404 UGGT2Q9NYU1 1516 aa6.91□□□□□ -1.3
NCK1-204ENST00000469404 SAMD9Q5K651 1589 aa6.9□□□□□ -1.3
NCK1-204ENST00000469404 EFCAB5A4FU69 1503 aa6.9□□□□□ -1.3
NCK1-204ENST00000469404 FMN1Q68DA7 1419 aa6.9□□□□□ -1.3
NCK1-204ENST00000469404 PCGF6Q9BYE7 350 aa6.9□□□□□ -1.31
NCK1-204ENST00000469404 NPM1P06748 294 aaKnown RBP eCLIP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms