RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
VARS2-205ENST00000469358 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
VARS2-205ENST00000469358 TSHZ2Q9NRE2 1034 aa17.33■□□□□ 0.36
VARS2-205ENST00000469358 SETD5Q9C0A6 1442 aa17.31■□□□□ 0.36
VARS2-205ENST00000469358 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
VARS2-205ENST00000469358 MYT1Q01538 1121 aa17.3■□□□□ 0.36
VARS2-205ENST00000469358 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
VARS2-205ENST00000469358 LRRC9Q6ZRR7 1453 aa17.28■□□□□ 0.36
VARS2-205ENST00000469358 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
VARS2-205ENST00000469358 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.35
VARS2-205ENST00000469358 FKBP8Q14318 412 aa17.27■□□□□ 0.35
VARS2-205ENST00000469358 FHOD3Q2V2M9 1422 aa17.25■□□□□ 0.35
VARS2-205ENST00000469358 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
VARS2-205ENST00000469358 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.34
VARS2-205ENST00000469358 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
VARS2-205ENST00000469358 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
VARS2-205ENST00000469358 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
VARS2-205ENST00000469358 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
VARS2-205ENST00000469358 ANP32CO43423 234 aa17.1■□□□□ 0.33
VARS2-205ENST00000469358 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
VARS2-205ENST00000469358 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
VARS2-205ENST00000469358 TONSLQ96HA7 1378 aa17.07■□□□□ 0.32
VARS2-205ENST00000469358 NESP48681 1621 aa17.05■□□□□ 0.32
VARS2-205ENST00000469358 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
VARS2-205ENST00000469358 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
VARS2-205ENST00000469358 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
VARS2-205ENST00000469358 CFAP43Q8NDM7 1665 aa17.04■□□□□ 0.32
VARS2-205ENST00000469358 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
VARS2-205ENST00000469358 NEFLP07196 543 aa17.03■□□□□ 0.32
VARS2-205ENST00000469358 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.32
VARS2-205ENST00000469358 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.32
VARS2-205ENST00000469358 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
VARS2-205ENST00000469358 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
VARS2-205ENST00000469358 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
VARS2-205ENST00000469358 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
VARS2-205ENST00000469358 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
VARS2-205ENST00000469358 PRDM2Q13029 1718 aa17■□□□□ 0.31
VARS2-205ENST00000469358 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■■■□ 23.2
VARS2-205ENST00000469358 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
VARS2-205ENST00000469358 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
VARS2-205ENST00000469358 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
VARS2-205ENST00000469358 RBM19Q9Y4C8 960 aaKnown RBP16.97■□□□□ 0.31
VARS2-205ENST00000469358 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
VARS2-205ENST00000469358 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
VARS2-205ENST00000469358 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
VARS2-205ENST00000469358 FOXD1Q16676 465 aa16.95■□□□□ 0.3
VARS2-205ENST00000469358 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
VARS2-205ENST00000469358 NAIPQ13075 1403 aa16.92■□□□□ 0.3
VARS2-205ENST00000469358 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
VARS2-205ENST00000469358 CCDC184Q52MB2 194 aa16.92■□□□□ 0.3
VARS2-205ENST00000469358 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
VARS2-205ENST00000469358 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
VARS2-205ENST00000469358 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
VARS2-205ENST00000469358 FMN1Q68DA7 1419 aa16.91■□□□□ 0.3
VARS2-205ENST00000469358 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
VARS2-205ENST00000469358 NCOA2Q15596 1464 aa16.9■□□□□ 0.3
VARS2-205ENST00000469358 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
VARS2-205ENST00000469358 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
VARS2-205ENST00000469358 EFCAB5A4FU69 1503 aa16.89■□□□□ 0.29
VARS2-205ENST00000469358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
VARS2-205ENST00000469358 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
VARS2-205ENST00000469358 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
VARS2-205ENST00000469358 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
VARS2-205ENST00000469358 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
VARS2-205ENST00000469358 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
VARS2-205ENST00000469358 KDM5BQ9UGL1 1544 aa16.84■□□□□ 0.29
VARS2-205ENST00000469358 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.28
VARS2-205ENST00000469358 CTTNBP2Q8WZ74 1663 aa16.83■□□□□ 0.28
VARS2-205ENST00000469358 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
VARS2-205ENST00000469358 MAGI3Q5TCQ9 1506 aa16.82■□□□□ 0.28
VARS2-205ENST00000469358 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
VARS2-205ENST00000469358 MSH5O43196 834 aa16.81■□□□□ 0.28
VARS2-205ENST00000469358 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
VARS2-205ENST00000469358 DENND4BO75064 1496 aaPredicted RBP16.8■□□□□ 0.28
VARS2-205ENST00000469358 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
VARS2-205ENST00000469358 CUL7Q14999 1698 aa16.79■□□□□ 0.28
VARS2-205ENST00000469358 KDM6BO15054 1643 aa16.79■□□□□ 0.28
VARS2-205ENST00000469358 MPHOSPH9Q99550 1183 aa16.78■□□□□ 0.28
VARS2-205ENST00000469358 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
VARS2-205ENST00000469358 EIF4G2P78344 907 aaKnown RBP eCLIP16.77■□□□□ 0.28
VARS2-205ENST00000469358 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
VARS2-205ENST00000469358 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
VARS2-205ENST00000469358 SAMD9Q5K651 1589 aa16.73■□□□□ 0.27
VARS2-205ENST00000469358 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
VARS2-205ENST00000469358 POLR3GLQ9BT43 218 aa16.72■□□□□ 0.27
VARS2-205ENST00000469358 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
VARS2-205ENST00000469358 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
VARS2-205ENST00000469358 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
VARS2-205ENST00000469358 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
VARS2-205ENST00000469358 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
VARS2-205ENST00000469358 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
VARS2-205ENST00000469358 CDK11AQ9UQ88 783 aaPredicted RBP16.69■□□□□ 0.26
VARS2-205ENST00000469358 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
VARS2-205ENST00000469358 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
VARS2-205ENST00000469358 CNTLNQ9NXG0 1405 aa16.66■□□□□ 0.26
VARS2-205ENST00000469358 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
VARS2-205ENST00000469358 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
VARS2-205ENST00000469358 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
VARS2-205ENST00000469358 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
VARS2-205ENST00000469358 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms