RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-223ENST00000465143 GRIN2BQ13224 1484 aa13.07□□□□□ -0.32
ITSN1-223ENST00000465143 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
ITSN1-223ENST00000465143 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
ITSN1-223ENST00000465143 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
ITSN1-223ENST00000465143 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
ITSN1-223ENST00000465143 TOP2BQ02880 1626 aa13.05□□□□□ -0.32
ITSN1-223ENST00000465143 WDR97A6NE52 1622 aa13.03□□□□□ -0.32
ITSN1-223ENST00000465143 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-223ENST00000465143 TRIM41Q8WV44 630 aa13.01□□□□□ -0.33
ITSN1-223ENST00000465143 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
ITSN1-223ENST00000465143 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
ITSN1-223ENST00000465143 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
ITSN1-223ENST00000465143 APLP2Q06481 763 aa12.95□□□□□ -0.34
ITSN1-223ENST00000465143 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
ITSN1-223ENST00000465143 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
ITSN1-223ENST00000465143 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
ITSN1-223ENST00000465143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-223ENST00000465143 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
ITSN1-223ENST00000465143 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
ITSN1-223ENST00000465143 CYB5RLQ6IPT4 315 aa12.89□□□□□ -0.35
ITSN1-223ENST00000465143 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
ITSN1-223ENST00000465143 IGF1RP08069 1367 aa12.88□□□□□ -0.35
ITSN1-223ENST00000465143 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
ITSN1-223ENST00000465143 CHD1O14646 1710 aa12.87□□□□□ -0.35
ITSN1-223ENST00000465143 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
ITSN1-223ENST00000465143 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
ITSN1-223ENST00000465143 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
ITSN1-223ENST00000465143 NUP160Q12769 1436 aa12.83□□□□□ -0.36
ITSN1-223ENST00000465143 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.36
ITSN1-223ENST00000465143 RIMBP3CA6NJZ7 1639 aa12.82□□□□□ -0.36
ITSN1-223ENST00000465143 RIMBP3BA6NNM3 1639 aa12.82□□□□□ -0.36
ITSN1-223ENST00000465143 RIMBP3Q9UFD9 1639 aa12.82□□□□□ -0.36
ITSN1-223ENST00000465143 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
ITSN1-223ENST00000465143 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
ITSN1-223ENST00000465143 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
ITSN1-223ENST00000465143 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
ITSN1-223ENST00000465143 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
ITSN1-223ENST00000465143 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
ITSN1-223ENST00000465143 POLA2Q14181 598 aa12.71□□□□□ -0.37
ITSN1-223ENST00000465143 KIAA0586Q9BVV6 1533 aa12.71□□□□□ -0.38
ITSN1-223ENST00000465143 CUL7Q14999 1698 aa12.7□□□□□ -0.38
ITSN1-223ENST00000465143 RAPGEF2Q9Y4G8 1499 aa12.7□□□□□ -0.38
ITSN1-223ENST00000465143 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-223ENST00000465143 FAM9AQ8IZU1 332 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-223ENST00000465143 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
ITSN1-223ENST00000465143 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-223ENST00000465143 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
ITSN1-223ENST00000465143 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
ITSN1-223ENST00000465143 EEA1Q15075 1411 aa12.62□□□□□ -0.39
ITSN1-223ENST00000465143 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
ITSN1-223ENST00000465143 SHROOM2Q13796 1616 aa12.62□□□□□ -0.39
ITSN1-223ENST00000465143 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
ITSN1-223ENST00000465143 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
ITSN1-223ENST00000465143 PTPRGP23470 1445 aa12.6□□□□□ -0.39
ITSN1-223ENST00000465143 TNIKQ9UKE5 1360 aa12.58□□□□□ -0.4
ITSN1-223ENST00000465143 IQGAP2Q13576 1575 aa12.57□□□□□ -0.4
ITSN1-223ENST00000465143 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
ITSN1-223ENST00000465143 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
ITSN1-223ENST00000465143 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-223ENST00000465143 RANGAP1P46060 587 aaPredicted RBP12.53□□□□□ -0.4
ITSN1-223ENST00000465143 UGGT2Q9NYU1 1516 aa12.52□□□□□ -0.41
ITSN1-223ENST00000465143 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
ITSN1-223ENST00000465143 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
ITSN1-223ENST00000465143 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
ITSN1-223ENST00000465143 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
ITSN1-223ENST00000465143 UACAQ9BZF9 1416 aa12.48□□□□□ -0.41
ITSN1-223ENST00000465143 FAM69CQ0P6D2 419 aa12.47□□□□□ -0.41
ITSN1-223ENST00000465143 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
ITSN1-223ENST00000465143 KIAA0556O60303 1618 aa12.44□□□□□ -0.42
ITSN1-223ENST00000465143 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
ITSN1-223ENST00000465143 UHRF1BP1LA0JNW5 1464 aa12.42□□□□□ -0.42
ITSN1-223ENST00000465143 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
ITSN1-223ENST00000465143 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
ITSN1-223ENST00000465143 ARID3CA6NKF2 412 aa12.4□□□□□ -0.42
ITSN1-223ENST00000465143 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.43
ITSN1-223ENST00000465143 MAPKBP1O60336 1514 aa12.39□□□□□ -0.43
ITSN1-223ENST00000465143 KIF21BO75037 1637 aa12.39□□□□□ -0.43
ITSN1-223ENST00000465143 ABCC10Q5T3U5 1492 aa12.39□□□□□ -0.43
ITSN1-223ENST00000465143 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
ITSN1-223ENST00000465143 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
ITSN1-223ENST00000465143 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
ITSN1-223ENST00000465143 FHOD3Q2V2M9 1422 aa12.37□□□□□ -0.43
ITSN1-223ENST00000465143 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
ITSN1-223ENST00000465143 KDM5BQ9UGL1 1544 aa12.35□□□□□ -0.43
ITSN1-223ENST00000465143 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
ITSN1-223ENST00000465143 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-223ENST00000465143 ABCA8O94911 1581 aa12.31□□□□□ -0.44
ITSN1-223ENST00000465143 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
ITSN1-223ENST00000465143 SAMD9Q5K651 1589 aa12.3□□□□□ -0.44
ITSN1-223ENST00000465143 WDR7Q9Y4E6 1490 aa12.3□□□□□ -0.44
ITSN1-223ENST00000465143 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
ITSN1-223ENST00000465143 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
ITSN1-223ENST00000465143 DIP2BQ9P265 1576 aa12.29□□□□□ -0.44
ITSN1-223ENST00000465143 EPRSP07814 1512 aaKnown RBP12.28□□□□□ -0.44
ITSN1-223ENST00000465143 ATP10BO94823 1461 aa12.27□□□□□ -0.44
ITSN1-223ENST00000465143 PLEKHD1A6NEE1 506 aa12.27□□□□□ -0.45
ITSN1-223ENST00000465143 ZBTB22O15209 634 aa12.26□□□□□ -0.45
ITSN1-223ENST00000465143 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
ITSN1-223ENST00000465143 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
ITSN1-223ENST00000465143 ZCCHC11Q5TAX3 1644 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms