RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-223ENST00000465143 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
ITSN1-223ENST00000465143 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
ITSN1-223ENST00000465143 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
ITSN1-223ENST00000465143 PHF23Q9BUL5 403 aaPredicted RBP18.89■□□□□ 0.61
ITSN1-223ENST00000465143 NISCHQ9Y2I1 1504 aa18.28■□□□□ 0.52
ITSN1-223ENST00000465143 FOXD1Q16676 465 aa17.92■□□□□ 0.46
ITSN1-223ENST00000465143 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
ITSN1-223ENST00000465143 MSH5O43196 834 aa16.75■□□□□ 0.27
ITSN1-223ENST00000465143 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
ITSN1-223ENST00000465143 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
ITSN1-223ENST00000465143 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
ITSN1-223ENST00000465143 ADRA2BP18089 450 aa16.55■□□□□ 0.24
ITSN1-223ENST00000465143 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
ITSN1-223ENST00000465143 ABCC9O60706 1549 aa16.04■□□□□ 0.16
ITSN1-223ENST00000465143 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
ITSN1-223ENST00000465143 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
ITSN1-223ENST00000465143 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
ITSN1-223ENST00000465143 NACADO15069 1562 aa15.3■□□□□ 0.04
ITSN1-223ENST00000465143 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
ITSN1-223ENST00000465143 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
ITSN1-223ENST00000465143 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
ITSN1-223ENST00000465143 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
ITSN1-223ENST00000465143 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
ITSN1-223ENST00000465143 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
ITSN1-223ENST00000465143 SCRIBQ14160 1630 aa14.83□□□□□ -0.04
ITSN1-223ENST00000465143 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
ITSN1-223ENST00000465143 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
ITSN1-223ENST00000465143 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
ITSN1-223ENST00000465143 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
ITSN1-223ENST00000465143 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
ITSN1-223ENST00000465143 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
ITSN1-223ENST00000465143 DCAF8L1A6NGE4 600 aa14.59□□□□□ -0.07
ITSN1-223ENST00000465143 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
ITSN1-223ENST00000465143 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
ITSN1-223ENST00000465143 CECR2Q9BXF3 1484 aa14.43□□□□□ -0.1
ITSN1-223ENST00000465143 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
ITSN1-223ENST00000465143 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
ITSN1-223ENST00000465143 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
ITSN1-223ENST00000465143 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
ITSN1-223ENST00000465143 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
ITSN1-223ENST00000465143 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
ITSN1-223ENST00000465143 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
ITSN1-223ENST00000465143 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
ITSN1-223ENST00000465143 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
ITSN1-223ENST00000465143 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
ITSN1-223ENST00000465143 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
ITSN1-223ENST00000465143 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
ITSN1-223ENST00000465143 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
ITSN1-223ENST00000465143 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
ITSN1-223ENST00000465143 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
ITSN1-223ENST00000465143 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
ITSN1-223ENST00000465143 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
ITSN1-223ENST00000465143 WIZO95785 1651 aa13.86□□□□□ -0.19
ITSN1-223ENST00000465143 NESP48681 1621 aa13.82□□□□□ -0.2
ITSN1-223ENST00000465143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.24e-9■■■■■ 31.2
ITSN1-223ENST00000465143 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
ITSN1-223ENST00000465143 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
ITSN1-223ENST00000465143 TOP2AP11388 1531 aaKnown RBP13.77□□□□□ -0.21
ITSN1-223ENST00000465143 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
ITSN1-223ENST00000465143 LAMC3Q9Y6N6 1575 aa13.73□□□□□ -0.21
ITSN1-223ENST00000465143 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
ITSN1-223ENST00000465143 CUX2O14529 1486 aa13.68□□□□□ -0.22
ITSN1-223ENST00000465143 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
ITSN1-223ENST00000465143 CFTRP13569 1480 aa13.65□□□□□ -0.22
ITSN1-223ENST00000465143 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
ITSN1-223ENST00000465143 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
ITSN1-223ENST00000465143 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
ITSN1-223ENST00000465143 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
ITSN1-223ENST00000465143 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
ITSN1-223ENST00000465143 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
ITSN1-223ENST00000465143 WDR62O43379 1518 aa13.49□□□□□ -0.25
ITSN1-223ENST00000465143 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
ITSN1-223ENST00000465143 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
ITSN1-223ENST00000465143 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
ITSN1-223ENST00000465143 CAPN15O75808 1086 aa13.38□□□□□ -0.27
ITSN1-223ENST00000465143 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
ITSN1-223ENST00000465143 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
ITSN1-223ENST00000465143 DSG3P32926 999 aa13.35□□□□□ -0.27
ITSN1-223ENST00000465143 IFT140Q96RY7 1462 aa13.32□□□□□ -0.28
ITSN1-223ENST00000465143 KCNA4P22459 653 aa13.31□□□□□ -0.28
ITSN1-223ENST00000465143 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
ITSN1-223ENST00000465143 PRDM2Q13029 1718 aa13.28□□□□□ -0.28
ITSN1-223ENST00000465143 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
ITSN1-223ENST00000465143 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-223ENST00000465143 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-223ENST00000465143 SOGA1O94964 1423 aa13.24□□□□□ -0.29
ITSN1-223ENST00000465143 RAD54L2Q9Y4B4 1467 aa13.22□□□□□ -0.29
ITSN1-223ENST00000465143 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
ITSN1-223ENST00000465143 CUX1P39880 1505 aa13.21□□□□□ -0.29
ITSN1-223ENST00000465143 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
ITSN1-223ENST00000465143 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
ITSN1-223ENST00000465143 AQRO60306 1485 aaKnown RBP eCLIP13.2□□□□□ -0.3
ITSN1-223ENST00000465143 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
ITSN1-223ENST00000465143 POTEHQ6S545 545 aa13.17□□□□□ -0.3
ITSN1-223ENST00000465143 FBLN2P98095 1184 aa13.16□□□□□ -0.3
ITSN1-223ENST00000465143 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-223ENST00000465143 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
ITSN1-223ENST00000465143 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
ITSN1-223ENST00000465143 ABCB7O75027 752 aa13.09□□□□□ -0.31
ITSN1-223ENST00000465143 CHMP7Q8WUX9 453 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms