RNA–Protein interactions for RNA: ENST00000464469.2

ZNF28-205, Transcript of zinc finger protein 28, humanhuman

TSL 1 (best)

Gene ZNF28, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-205ENST00000464469 POLA1P09884 1462 aaPredicted RBP9.87□□□□□ -0.83
ZNF28-205ENST00000464469 EEA1Q15075 1411 aa9.86□□□□□ -0.83
ZNF28-205ENST00000464469 MAPKBP1O60336 1514 aa9.86□□□□□ -0.83
ZNF28-205ENST00000464469 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
ZNF28-205ENST00000464469 SOGA1O94964 1423 aa9.84□□□□□ -0.83
ZNF28-205ENST00000464469 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
ZNF28-205ENST00000464469 FAM9AQ8IZU1 332 aaPredicted RBP9.82□□□□□ -0.84
ZNF28-205ENST00000464469 TARBP1Q13395 1621 aaKnown RBP9.82□□□□□ -0.84
ZNF28-205ENST00000464469 KIF27Q86VH2 1401 aa9.82□□□□□ -0.84
ZNF28-205ENST00000464469 RAD54L2Q9Y4B4 1467 aa9.81□□□□□ -0.84
ZNF28-205ENST00000464469 RUSC2Q8N2Y8 1516 aa9.8□□□□□ -0.84
ZNF28-205ENST00000464469 PTPRMP28827 1452 aa9.79□□□□□ -0.84
ZNF28-205ENST00000464469 PPRC1Q5VV67 1664 aaKnown RBP9.79□□□□□ -0.84
ZNF28-205ENST00000464469 COL17A1Q9UMD9 1497 aaPredicted RBP9.78□□□□□ -0.84
ZNF28-205ENST00000464469 ABCA5Q8WWZ7 1642 aa9.78□□□□□ -0.84
ZNF28-205ENST00000464469 KIF21BO75037 1637 aa9.75□□□□□ -0.85
ZNF28-205ENST00000464469 PBRM1Q86U86 1689 aa9.75□□□□□ -0.85
ZNF28-205ENST00000464469 HSPA2P54652 639 aa9.75□□□□□ -0.85
ZNF28-205ENST00000464469 CHMP7Q8WUX9 453 aaPredicted RBP9.75□□□□□ -0.85
ZNF28-205ENST00000464469 CSRNP3Q8WYN3 585 aa9.75□□□□□ -0.85
ZNF28-205ENST00000464469 CUL7Q14999 1698 aa9.74□□□□□ -0.85
ZNF28-205ENST00000464469 ERICH3Q5RHP9 1530 aa9.72□□□□□ -0.85
ZNF28-205ENST00000464469 PHF23Q9BUL5 403 aaPredicted RBP9.72□□□□□ -0.85
ZNF28-205ENST00000464469 TDRD9Q8NDG6 1382 aaKnown RBP9.72□□□□□ -0.85
ZNF28-205ENST00000464469 GOLGA3Q08378 1498 aa9.72□□□□□ -0.85
ZNF28-205ENST00000464469 CEP170Q5SW79 1584 aa9.71□□□□□ -0.86
ZNF28-205ENST00000464469 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
ZNF28-205ENST00000464469 IGF1RP08069 1367 aa9.69□□□□□ -0.86
ZNF28-205ENST00000464469 ADAMTSL3P82987 1691 aa9.69□□□□□ -0.86
ZNF28-205ENST00000464469 GRIN2BQ13224 1484 aa9.69□□□□□ -0.86
ZNF28-205ENST00000464469 PRXQ9BXM0 1461 aa9.69□□□□□ -0.86
ZNF28-205ENST00000464469 IQSEC2Q5JU85 1478 aa9.68□□□□□ -0.86
ZNF28-205ENST00000464469 MAGI1Q96QZ7 1491 aaPredicted RBP9.68□□□□□ -0.86
ZNF28-205ENST00000464469 RAPGEF2Q9Y4G8 1499 aa9.67□□□□□ -0.86
ZNF28-205ENST00000464469 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
ZNF28-205ENST00000464469 LTBP4Q8N2S1 1624 aa9.67□□□□□ -0.86
ZNF28-205ENST00000464469 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
ZNF28-205ENST00000464469 CARMIL1Q5VZK9 1371 aa9.66□□□□□ -0.86
ZNF28-205ENST00000464469 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
ZNF28-205ENST00000464469 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
ZNF28-205ENST00000464469 FHAD1B1AJZ9 1412 aa9.63□□□□□ -0.87
ZNF28-205ENST00000464469 TNIKQ9UKE5 1360 aa9.63□□□□□ -0.87
ZNF28-205ENST00000464469 CTTNBP2Q8WZ74 1663 aa9.62□□□□□ -0.87
ZNF28-205ENST00000464469 SHROOM2Q13796 1616 aa9.62□□□□□ -0.87
ZNF28-205ENST00000464469 ADCY10Q96PN6 1610 aa9.61□□□□□ -0.87
ZNF28-205ENST00000464469 MADDQ8WXG6 1647 aa9.58□□□□□ -0.88
ZNF28-205ENST00000464469 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
ZNF28-205ENST00000464469 CEP162Q5TB80 1403 aa9.57□□□□□ -0.88
ZNF28-205ENST00000464469 GRIN2AQ12879 1464 aa9.57□□□□□ -0.88
ZNF28-205ENST00000464469 STRCQ7RTU9 1775 aa9.56□□□□□ -0.88
ZNF28-205ENST00000464469 GLI2P10070 1586 aa9.56□□□□□ -0.88
ZNF28-205ENST00000464469 PTPRTO14522 1441 aa9.56□□□□□ -0.88
ZNF28-205ENST00000464469 HSPA1LP34931 641 aa9.54□□□□□ -0.88
ZNF28-205ENST00000464469 CLIP1P30622 1438 aa9.54□□□□□ -0.88
ZNF28-205ENST00000464469 UBAP1LF5GYI3 381 aa9.53□□□□□ -0.88
ZNF28-205ENST00000464469 IQGAP2Q13576 1575 aa9.53□□□□□ -0.88
ZNF28-205ENST00000464469 RGS17Q9UGC6 210 aaPredicted RBP9.51□□□□□ -0.89
ZNF28-205ENST00000464469 TEX14Q8IWB6 1497 aa9.51□□□□□ -0.89
ZNF28-205ENST00000464469 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
ZNF28-205ENST00000464469 YEATS2Q9ULM3 1422 aa9.5□□□□□ -0.89
ZNF28-205ENST00000464469 DMRT2Q9Y5R5 561 aa9.5□□□□□ -0.89
ZNF28-205ENST00000464469 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
ZNF28-205ENST00000464469 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
ZNF28-205ENST00000464469 NUP160Q12769 1436 aa9.49□□□□□ -0.89
ZNF28-205ENST00000464469 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
ZNF28-205ENST00000464469 KIAA0586Q9BVV6 1533 aa9.49□□□□□ -0.89
ZNF28-205ENST00000464469 MAP3K4Q9Y6R4 1608 aa9.49□□□□□ -0.89
ZNF28-205ENST00000464469 CFAP43Q8NDM7 1665 aa9.48□□□□□ -0.89
ZNF28-205ENST00000464469 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
ZNF28-205ENST00000464469 SAMD9Q5K651 1589 aa9.47□□□□□ -0.89
ZNF28-205ENST00000464469 UGGT2Q9NYU1 1516 aa9.46□□□□□ -0.9
ZNF28-205ENST00000464469 VPS8Q8N3P4 1428 aa9.44□□□□□ -0.9
ZNF28-205ENST00000464469 PRG4Q92954 1404 aaPredicted RBP9.44□□□□□ -0.9
ZNF28-205ENST00000464469 KIAA0556O60303 1618 aa9.42□□□□□ -0.9
ZNF28-205ENST00000464469 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.9
ZNF28-205ENST00000464469 FHOD3Q2V2M9 1422 aa9.41□□□□□ -0.9
ZNF28-205ENST00000464469 SLC34A2O95436 690 aa9.4□□□□□ -0.9
ZNF28-205ENST00000464469 CARMIL2Q6F5E8 1435 aa9.39□□□□□ -0.91
ZNF28-205ENST00000464469 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
ZNF28-205ENST00000464469 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
ZNF28-205ENST00000464469 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
ZNF28-205ENST00000464469 DISP1Q96F81 1524 aa9.39□□□□□ -0.91
ZNF28-205ENST00000464469 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
ZNF28-205ENST00000464469 PLB1Q6P1J6 1458 aa9.38□□□□□ -0.91
ZNF28-205ENST00000464469 ASXL2Q76L83 1435 aa9.38□□□□□ -0.91
ZNF28-205ENST00000464469 SCAF1Q9H7N4 1312 aaKnown RBP9.37□□□□□ -0.91
ZNF28-205ENST00000464469 JPH4Q96JJ6 628 aa9.37□□□□□ -0.91
ZNF28-205ENST00000464469 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
ZNF28-205ENST00000464469 PLPPR3Q6T4P5 718 aa9.36□□□□□ -0.91
ZNF28-205ENST00000464469 CASKIN1Q8WXD9 1431 aa9.34□□□□□ -0.91
ZNF28-205ENST00000464469 APLP2Q06481 763 aa9.34□□□□□ -0.91
ZNF28-205ENST00000464469 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
ZNF28-205ENST00000464469 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
ZNF28-205ENST00000464469 EPRSP07814 1512 aaKnown RBP9.32□□□□□ -0.92
ZNF28-205ENST00000464469 PIP4K2BP78356 416 aa9.32□□□□□ -0.92
ZNF28-205ENST00000464469 LRRIQ1Q96JM4 1722 aa9.31□□□□□ -0.92
ZNF28-205ENST00000464469 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
ZNF28-205ENST00000464469 TIAM1Q13009 1591 aa9.31□□□□□ -0.92
ZNF28-205ENST00000464469 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
ZNF28-205ENST00000464469 CCDC18Q5T9S5 1454 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms