RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 SETD5Q9C0A6 1442 aa25.58■■□□□ 1.69
PTPN6-204ENST00000456013 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
PTPN6-204ENST00000456013 PHLDB1Q86UU1 1377 aa25.53■■□□□ 1.68
PTPN6-204ENST00000456013 PCF11O94913 1555 aaKnown RBP25.51■■□□□ 1.67
PTPN6-204ENST00000456013 SUPT16HQ9Y5B9 1047 aaKnown RBP25.46■■□□□ 1.67
PTPN6-204ENST00000456013 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
PTPN6-204ENST00000456013 EFCAB5A4FU69 1503 aa25.41■■□□□ 1.66
PTPN6-204ENST00000456013 FYCO1Q9BQS8 1478 aa25.41■■□□□ 1.66
PTPN6-204ENST00000456013 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
PTPN6-204ENST00000456013 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
PTPN6-204ENST00000456013 FAM50AQ14320 339 aaKnown RBP25.39■■□□□ 1.66
PTPN6-204ENST00000456013 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.65
PTPN6-204ENST00000456013 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
PTPN6-204ENST00000456013 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.65
PTPN6-204ENST00000456013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.37■■□□□ 1.65
PTPN6-204ENST00000456013 TIMELESSQ9UNS1 1208 aa25.37■■□□□ 1.65
PTPN6-204ENST00000456013 CUL7Q14999 1698 aa25.36■■□□□ 1.65
PTPN6-204ENST00000456013 CTTNBP2Q8WZ74 1663 aa25.36■■□□□ 1.65
PTPN6-204ENST00000456013 CASKIN1Q8WXD9 1431 aa25.35■■□□□ 1.65
PTPN6-204ENST00000456013 FHOD3Q2V2M9 1422 aa25.35■■□□□ 1.65
PTPN6-204ENST00000456013 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
PTPN6-204ENST00000456013 SIN3AQ96ST3 1273 aa25.33■■□□□ 1.65
PTPN6-204ENST00000456013 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
PTPN6-204ENST00000456013 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
PTPN6-204ENST00000456013 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
PTPN6-204ENST00000456013 KCNH8Q96L42 1107 aa25.27■■□□□ 1.64
PTPN6-204ENST00000456013 ATP1B4Q9UN42 357 aaPredicted RBP25.27■■□□□ 1.64
PTPN6-204ENST00000456013 FMN1Q68DA7 1419 aa25.23■■□□□ 1.63
PTPN6-204ENST00000456013 DDX10Q13206 875 aaKnown RBP25.22■■□□□ 1.63
PTPN6-204ENST00000456013 PPP1R15AO75807 674 aaPredicted RBP25.21■■□□□ 1.63
PTPN6-204ENST00000456013 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.63
PTPN6-204ENST00000456013 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
PTPN6-204ENST00000456013 SAMD9Q5K651 1589 aa25.13■■□□□ 1.61
PTPN6-204ENST00000456013 LRRIQ1Q96JM4 1722 aa25.12■■□□□ 1.61
PTPN6-204ENST00000456013 CCDC18Q5T9S5 1454 aa25.12■■□□□ 1.61
PTPN6-204ENST00000456013 NESP48681 1621 aa25.12■■□□□ 1.61
PTPN6-204ENST00000456013 HFM1A2PYH4 1435 aa25.1■■□□□ 1.61
PTPN6-204ENST00000456013 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
PTPN6-204ENST00000456013 CCER2I3L3R5 266 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 MTUS2Q5JR59 1369 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 UACAQ9BZF9 1416 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 TSHZ2Q9NRE2 1034 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
PTPN6-204ENST00000456013 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
PTPN6-204ENST00000456013 PTPRKQ15262 1439 aa25.06■■□□□ 1.6
PTPN6-204ENST00000456013 TONSLQ96HA7 1378 aa25.05■■□□□ 1.6
PTPN6-204ENST00000456013 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
PTPN6-204ENST00000456013 GRIN2BQ13224 1484 aa25.04■■□□□ 1.6
PTPN6-204ENST00000456013 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
PTPN6-204ENST00000456013 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
PTPN6-204ENST00000456013 NCOA2Q15596 1464 aa25.02■■□□□ 1.6
PTPN6-204ENST00000456013 MYOM3Q5VTT5 1437 aa25.02■■□□□ 1.6
PTPN6-204ENST00000456013 ANP32CO43423 234 aa25.02■■□□□ 1.6
PTPN6-204ENST00000456013 HIRIP3Q9BW71 556 aaPredicted RBP25.02■■□□□ 1.6
PTPN6-204ENST00000456013 NAIPQ13075 1403 aa25■■□□□ 1.59
PTPN6-204ENST00000456013 EHBP1L1Q8N3D4 1523 aa25■■□□□ 1.59
PTPN6-204ENST00000456013 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
PTPN6-204ENST00000456013 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
PTPN6-204ENST00000456013 FKBP8Q14318 412 aa24.95■■□□□ 1.59
PTPN6-204ENST00000456013 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
PTPN6-204ENST00000456013 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
PTPN6-204ENST00000456013 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
PTPN6-204ENST00000456013 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
PTPN6-204ENST00000456013 BCANQ96GW7 911 aa24.88■■□□□ 1.57
PTPN6-204ENST00000456013 GCC2Q8IWJ2 1684 aa24.88■■□□□ 1.57
PTPN6-204ENST00000456013 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
PTPN6-204ENST00000456013 MAGI3Q5TCQ9 1506 aa24.86■■□□□ 1.57
PTPN6-204ENST00000456013 NEFLP07196 543 aa24.86■■□□□ 1.57
PTPN6-204ENST00000456013 TRIM52Q96A61 297 aa24.85■■□□□ 1.57
PTPN6-204ENST00000456013 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
PTPN6-204ENST00000456013 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
PTPN6-204ENST00000456013 AKNAQ7Z591 1439 aa24.8■■□□□ 1.56
PTPN6-204ENST00000456013 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
PTPN6-204ENST00000456013 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
PTPN6-204ENST00000456013 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
PTPN6-204ENST00000456013 RRP7BPQ9NSQ0 103 aa24.73■■□□□ 1.55
PTPN6-204ENST00000456013 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
PTPN6-204ENST00000456013 EPRSP07814 1512 aaKnown RBP24.72■■□□□ 1.55
PTPN6-204ENST00000456013 ANP32EQ9BTT0 268 aa24.72■■□□□ 1.55
PTPN6-204ENST00000456013 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
PTPN6-204ENST00000456013 KDM6BO15054 1643 aa24.71■■□□□ 1.55
PTPN6-204ENST00000456013 CHIC2Q9UKJ5 165 aa24.68■■□□□ 1.54
PTPN6-204ENST00000456013 HSPA5P11021 654 aaKnown RBP24.68■■□□□ 1.54
PTPN6-204ENST00000456013 WASHC2AQ641Q2 1341 aa24.67■■□□□ 1.54
PTPN6-204ENST00000456013 WDR62O43379 1518 aa24.65■■□□□ 1.54
PTPN6-204ENST00000456013 ADAMTS12P58397 1594 aa24.64■■□□□ 1.54
PTPN6-204ENST00000456013 CDK13Q14004 1512 aaKnown RBP24.63■■□□□ 1.53
PTPN6-204ENST00000456013 EIF4G2P78344 907 aaKnown RBP eCLIP24.62■■□□□ 1.53
PTPN6-204ENST00000456013 MPHOSPH9Q99550 1183 aa24.62■■□□□ 1.53
PTPN6-204ENST00000456013 HNRNPUQ00839 825 aaKnown RBP eCLIP24.6■■□□□ 1.53
PTPN6-204ENST00000456013 RBM19Q9Y4C8 960 aaKnown RBP24.59■■□□□ 1.53
PTPN6-204ENST00000456013 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
PTPN6-204ENST00000456013 ROCK1Q13464 1354 aa24.55■■□□□ 1.52
PTPN6-204ENST00000456013 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
PTPN6-204ENST00000456013 NCOA1Q15788 1441 aa24.54■■□□□ 1.52
PTPN6-204ENST00000456013 DNMT1P26358 1616 aaKnown RBP24.53■■□□□ 1.52
PTPN6-204ENST00000456013 DAPK1P53355 1430 aa24.53■■□□□ 1.52
PTPN6-204ENST00000456013 RPRD2Q5VT52 1461 aaKnown RBP24.52■■□□□ 1.52
PTPN6-204ENST00000456013 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
PTPN6-204ENST00000456013 POLR1AO95602 1720 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms