RNA–Protein interactions for RNA: ENST00000455276.1

CTPS2-204, Transcript of CTP synthase 2, humanhuman

TSL 5

Gene CTPS2, Length 733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-204ENST00000455276 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
CTPS2-204ENST00000455276 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
CTPS2-204ENST00000455276 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
CTPS2-204ENST00000455276 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
CTPS2-204ENST00000455276 EEA1Q15075 1411 aa16.41■□□□□ 0.22
CTPS2-204ENST00000455276 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
CTPS2-204ENST00000455276 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
CTPS2-204ENST00000455276 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
CTPS2-204ENST00000455276 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
CTPS2-204ENST00000455276 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
CTPS2-204ENST00000455276 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
CTPS2-204ENST00000455276 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
CTPS2-204ENST00000455276 FAM9AQ8IZU1 332 aaPredicted RBP16.31■□□□□ 0.2
CTPS2-204ENST00000455276 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
CTPS2-204ENST00000455276 CFTRP13569 1480 aa16.29■□□□□ 0.2
CTPS2-204ENST00000455276 SOGA1O94964 1423 aa16.21■□□□□ 0.19
CTPS2-204ENST00000455276 MIER1Q8N108 512 aa16.21■□□□□ 0.19
CTPS2-204ENST00000455276 KIF21BO75037 1637 aa16.19■□□□□ 0.18
CTPS2-204ENST00000455276 FXR2P51116 673 aaKnown RBP eCLIP16.19■□□□□ 0.18
CTPS2-204ENST00000455276 CREBZFQ9NS37 354 aa16.19■□□□□ 0.18
CTPS2-204ENST00000455276 PLCD3Q8N3E9 789 aa16.18■□□□□ 0.18
CTPS2-204ENST00000455276 IFNLR1Q8IU57 520 aaPredicted RBP16.16■□□□□ 0.18
CTPS2-204ENST00000455276 PIP4P2Q8N4L2 257 aa16.15■□□□□ 0.18
CTPS2-204ENST00000455276 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
CTPS2-204ENST00000455276 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
CTPS2-204ENST00000455276 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
CTPS2-204ENST00000455276 CUX1P39880 1505 aa16.13■□□□□ 0.17
CTPS2-204ENST00000455276 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
CTPS2-204ENST00000455276 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
CTPS2-204ENST00000455276 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
CTPS2-204ENST00000455276 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
CTPS2-204ENST00000455276 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
CTPS2-204ENST00000455276 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CTPS2-204ENST00000455276 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
CTPS2-204ENST00000455276 CEP162Q5TB80 1403 aa16.03■□□□□ 0.16
CTPS2-204ENST00000455276 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
CTPS2-204ENST00000455276 ERICH3Q5RHP9 1530 aa16.03■□□□□ 0.16
CTPS2-204ENST00000455276 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
CTPS2-204ENST00000455276 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
CTPS2-204ENST00000455276 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
CTPS2-204ENST00000455276 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
CTPS2-204ENST00000455276 HAX1O00165 279 aa15.97■□□□□ 0.15
CTPS2-204ENST00000455276 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
CTPS2-204ENST00000455276 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
CTPS2-204ENST00000455276 FARP1Q9Y4F1 1045 aaPredicted RBP15.95■□□□□ 0.14
CTPS2-204ENST00000455276 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
CTPS2-204ENST00000455276 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
CTPS2-204ENST00000455276 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
CTPS2-204ENST00000455276 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
CTPS2-204ENST00000455276 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
CTPS2-204ENST00000455276 HRCP23327 699 aa15.87■□□□□ 0.13
CTPS2-204ENST00000455276 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
CTPS2-204ENST00000455276 NESP48681 1621 aa15.86■□□□□ 0.13
CTPS2-204ENST00000455276 CLIP1P30622 1438 aa15.85■□□□□ 0.13
CTPS2-204ENST00000455276 CUX2O14529 1486 aa15.84■□□□□ 0.13
CTPS2-204ENST00000455276 NUBP1P53384 320 aa15.84■□□□□ 0.13
CTPS2-204ENST00000455276 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
CTPS2-204ENST00000455276 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
CTPS2-204ENST00000455276 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
CTPS2-204ENST00000455276 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
CTPS2-204ENST00000455276 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
CTPS2-204ENST00000455276 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
CTPS2-204ENST00000455276 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
CTPS2-204ENST00000455276 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
CTPS2-204ENST00000455276 CUL7Q14999 1698 aa15.76■□□□□ 0.11
CTPS2-204ENST00000455276 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
CTPS2-204ENST00000455276 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
CTPS2-204ENST00000455276 IGF1RP08069 1367 aa15.74■□□□□ 0.11
CTPS2-204ENST00000455276 EVX2Q03828 476 aa15.72■□□□□ 0.11
CTPS2-204ENST00000455276 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
CTPS2-204ENST00000455276 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
CTPS2-204ENST00000455276 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
CTPS2-204ENST00000455276 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
CTPS2-204ENST00000455276 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
CTPS2-204ENST00000455276 FAM212AQ96EL1 285 aa15.66■□□□□ 0.1
CTPS2-204ENST00000455276 CTTNBP2Q8WZ74 1663 aa15.65■□□□□ 0.1
CTPS2-204ENST00000455276 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
CTPS2-204ENST00000455276 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
CTPS2-204ENST00000455276 PKD2Q13563 968 aa15.64■□□□□ 0.09
CTPS2-204ENST00000455276 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.09
CTPS2-204ENST00000455276 TSPYL2Q9H2G4 693 aaPredicted RBP15.64■□□□□ 0.09
CTPS2-204ENST00000455276 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
CTPS2-204ENST00000455276 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
CTPS2-204ENST00000455276 CD44P16070 742 aaKnown RBP15.62■□□□□ 0.09
CTPS2-204ENST00000455276 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
CTPS2-204ENST00000455276 ARHGAP35Q9NRY4 1499 aa15.6■□□□□ 0.09
CTPS2-204ENST00000455276 GSE1Q14687 1217 aa15.6■□□□□ 0.09
CTPS2-204ENST00000455276 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
CTPS2-204ENST00000455276 PBRM1Q86U86 1689 aa15.58■□□□□ 0.08
CTPS2-204ENST00000455276 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.08
CTPS2-204ENST00000455276 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
CTPS2-204ENST00000455276 WDR62O43379 1518 aa15.57■□□□□ 0.08
CTPS2-204ENST00000455276 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
CTPS2-204ENST00000455276 ZRANB1Q9UGI0 708 aa15.54■□□□□ 0.08
CTPS2-204ENST00000455276 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
CTPS2-204ENST00000455276 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
CTPS2-204ENST00000455276 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
CTPS2-204ENST00000455276 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
CTPS2-204ENST00000455276 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
CTPS2-204ENST00000455276 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms