RNA–Protein interactions for RNA: ENST00000455276.1

CTPS2-204, Transcript of CTP synthase 2, humanhuman

TSL 5

Gene CTPS2, Length 733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-204ENST00000455276 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
CTPS2-204ENST00000455276 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
CTPS2-204ENST00000455276 PHF23Q9BUL5 403 aaPredicted RBP26.08■■□□□ 1.77
CTPS2-204ENST00000455276 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
CTPS2-204ENST00000455276 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
CTPS2-204ENST00000455276 FOXD1Q16676 465 aa23.83■■□□□ 1.41
CTPS2-204ENST00000455276 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
CTPS2-204ENST00000455276 ADRA2BP18089 450 aa22.97■■□□□ 1.27
CTPS2-204ENST00000455276 POTEDQ86YR6 584 aa22.72■■□□□ 1.23
CTPS2-204ENST00000455276 PIAS4Q8N2W9 510 aaPredicted RBP22.45■■□□□ 1.18
CTPS2-204ENST00000455276 MSH5O43196 834 aa22.37■■□□□ 1.17
CTPS2-204ENST00000455276 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
CTPS2-204ENST00000455276 PPP4R3CPQ6ZMV5 832 aa21.19■□□□□ 0.98
CTPS2-204ENST00000455276 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
CTPS2-204ENST00000455276 MAPK8IP2Q13387 824 aaPredicted RBP20.84■□□□□ 0.93
CTPS2-204ENST00000455276 KCNA4P22459 653 aa20.8■□□□□ 0.92
CTPS2-204ENST00000455276 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
CTPS2-204ENST00000455276 CNKSR2Q8WXI2 1034 aa20.56■□□□□ 0.88
CTPS2-204ENST00000455276 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
CTPS2-204ENST00000455276 NPM3O75607 178 aaKnown RBP20.37■□□□□ 0.85
CTPS2-204ENST00000455276 RNF216Q9NWF9 866 aaPredicted RBP20.15■□□□□ 0.82
CTPS2-204ENST00000455276 HOXD11P31277 338 aaPredicted RBP20.08■□□□□ 0.81
CTPS2-204ENST00000455276 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
CTPS2-204ENST00000455276 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
CTPS2-204ENST00000455276 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
CTPS2-204ENST00000455276 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
CTPS2-204ENST00000455276 CACNB1Q02641 598 aaPredicted RBP19.47■□□□□ 0.71
CTPS2-204ENST00000455276 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
CTPS2-204ENST00000455276 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
CTPS2-204ENST00000455276 ZBTB22O15209 634 aa19.18■□□□□ 0.66
CTPS2-204ENST00000455276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
CTPS2-204ENST00000455276 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.64
CTPS2-204ENST00000455276 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
CTPS2-204ENST00000455276 RNF39Q9H2S5 420 aa19.02■□□□□ 0.64
CTPS2-204ENST00000455276 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
CTPS2-204ENST00000455276 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
CTPS2-204ENST00000455276 MYCNP04198 464 aaPredicted RBP18.77■□□□□ 0.6
CTPS2-204ENST00000455276 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
CTPS2-204ENST00000455276 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
CTPS2-204ENST00000455276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
CTPS2-204ENST00000455276 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
CTPS2-204ENST00000455276 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
CTPS2-204ENST00000455276 ATXN8OSP0DMR3 200 aa18.37■□□□□ 0.53
CTPS2-204ENST00000455276 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
CTPS2-204ENST00000455276 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
CTPS2-204ENST00000455276 APLP2Q06481 763 aa18.3■□□□□ 0.52
CTPS2-204ENST00000455276 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
CTPS2-204ENST00000455276 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
CTPS2-204ENST00000455276 CAPN15O75808 1086 aa18.2■□□□□ 0.5
CTPS2-204ENST00000455276 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
CTPS2-204ENST00000455276 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
CTPS2-204ENST00000455276 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
CTPS2-204ENST00000455276 NACADO15069 1562 aa18.04■□□□□ 0.48
CTPS2-204ENST00000455276 ABCC9O60706 1549 aa17.98■□□□□ 0.47
CTPS2-204ENST00000455276 DSG3P32926 999 aa17.91■□□□□ 0.46
CTPS2-204ENST00000455276 ABCB7O75027 752 aa17.89■□□□□ 0.45
CTPS2-204ENST00000455276 POLA2Q14181 598 aa17.86■□□□□ 0.45
CTPS2-204ENST00000455276 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
CTPS2-204ENST00000455276 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
CTPS2-204ENST00000455276 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
CTPS2-204ENST00000455276 POTEHQ6S545 545 aa17.7■□□□□ 0.42
CTPS2-204ENST00000455276 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
CTPS2-204ENST00000455276 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
CTPS2-204ENST00000455276 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
CTPS2-204ENST00000455276 FBLN2P98095 1184 aa17.47■□□□□ 0.39
CTPS2-204ENST00000455276 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
CTPS2-204ENST00000455276 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
CTPS2-204ENST00000455276 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
CTPS2-204ENST00000455276 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
CTPS2-204ENST00000455276 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
CTPS2-204ENST00000455276 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
CTPS2-204ENST00000455276 FKBP8Q14318 412 aa17.2■□□□□ 0.34
CTPS2-204ENST00000455276 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
CTPS2-204ENST00000455276 WIZO95785 1651 aa17.16■□□□□ 0.34
CTPS2-204ENST00000455276 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
CTPS2-204ENST00000455276 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
CTPS2-204ENST00000455276 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
CTPS2-204ENST00000455276 SPDYE2Q495Y8 402 aa17.06■□□□□ 0.32
CTPS2-204ENST00000455276 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
CTPS2-204ENST00000455276 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
CTPS2-204ENST00000455276 RBM42Q9BTD8 480 aaKnown RBP16.99■□□□□ 0.31
CTPS2-204ENST00000455276 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
CTPS2-204ENST00000455276 SSUH2Q9Y2M2 353 aa16.98■□□□□ 0.31
CTPS2-204ENST00000455276 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
CTPS2-204ENST00000455276 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.3
CTPS2-204ENST00000455276 PROM2Q8N271 834 aa16.88■□□□□ 0.29
CTPS2-204ENST00000455276 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
CTPS2-204ENST00000455276 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
CTPS2-204ENST00000455276 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
CTPS2-204ENST00000455276 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
CTPS2-204ENST00000455276 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
CTPS2-204ENST00000455276 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
CTPS2-204ENST00000455276 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
CTPS2-204ENST00000455276 CHRDL2Q6WN34 429 aa16.67■□□□□ 0.26
CTPS2-204ENST00000455276 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
CTPS2-204ENST00000455276 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
CTPS2-204ENST00000455276 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
CTPS2-204ENST00000455276 PITPNM1O00562 1244 aa16.53■□□□□ 0.24
CTPS2-204ENST00000455276 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
CTPS2-204ENST00000455276 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms