RNA–Protein interactions for RNA: ENST00000454189.6

GPM6B-205, Transcript of glycoprotein M6B, humanhuman

TSL 1 (best) BASIC

Gene GPM6B, Length 3,957 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-205ENST00000454189 IGF1RP08069 1367 aa11.22□□□□□ -0.61
GPM6B-205ENST00000454189 MIER1Q8N108 512 aa11.22□□□□□ -0.61
GPM6B-205ENST00000454189 RRP7BPQ9NSQ0 103 aa11.21□□□□□ -0.62
GPM6B-205ENST00000454189 FGD5Q6ZNL6 1462 aa11.21□□□□□ -0.62
GPM6B-205ENST00000454189 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
GPM6B-205ENST00000454189 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
GPM6B-205ENST00000454189 KIF21BO75037 1637 aa11.19□□□□□ -0.62
GPM6B-205ENST00000454189 TOP2BQ02880 1626 aa11.18□□□□□ -0.62
GPM6B-205ENST00000454189 MYT1Q01538 1121 aa11.16□□□□□ -0.62
GPM6B-205ENST00000454189 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
GPM6B-205ENST00000454189 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.62
GPM6B-205ENST00000454189 CUX1P39880 1505 aa11.15□□□□□ -0.62
GPM6B-205ENST00000454189 HIRIP3Q9BW71 556 aaPredicted RBP11.15□□□□□ -0.63
GPM6B-205ENST00000454189 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.63
GPM6B-205ENST00000454189 FMN1Q68DA7 1419 aa11.14□□□□□ -0.63
GPM6B-205ENST00000454189 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
GPM6B-205ENST00000454189 CC2D2AQ9P2K1 1620 aa11.13□□□□□ -0.63
GPM6B-205ENST00000454189 ERICH3Q5RHP9 1530 aa11.12□□□□□ -0.63
GPM6B-205ENST00000454189 ARHGAP35Q9NRY4 1499 aa11.12□□□□□ -0.63
GPM6B-205ENST00000454189 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
GPM6B-205ENST00000454189 PLEKHD1A6NEE1 506 aa11.12□□□□□ -0.63
GPM6B-205ENST00000454189 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
GPM6B-205ENST00000454189 TSPY4P0CV99 314 aa11.11□□□□□ -0.63
GPM6B-205ENST00000454189 TSPY10P0CW01 314 aa11.11□□□□□ -0.63
GPM6B-205ENST00000454189 RAB3GAP2Q9H2M9 1393 aa11.1□□□□□ -0.63
GPM6B-205ENST00000454189 CFDP1Q9UEE9 299 aaPredicted RBP11.1□□□□□ -0.63
GPM6B-205ENST00000454189 NESP48681 1621 aa11.1□□□□□ -0.63
GPM6B-205ENST00000454189 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
GPM6B-205ENST00000454189 ARAP1Q96P48 1450 aa11.09□□□□□ -0.63
GPM6B-205ENST00000454189 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
GPM6B-205ENST00000454189 BCANQ96GW7 911 aa11.05□□□□□ -0.64
GPM6B-205ENST00000454189 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
GPM6B-205ENST00000454189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.03□□□□□ -0.64
GPM6B-205ENST00000454189 TOPBP1Q92547 1522 aa11.02□□□□□ -0.64
GPM6B-205ENST00000454189 EIF4G2P78344 907 aaKnown RBP eCLIP11.02□□□□□ -0.64
GPM6B-205ENST00000454189 TIMELESSQ9UNS1 1208 aa11.02□□□□□ -0.64
GPM6B-205ENST00000454189 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
GPM6B-205ENST00000454189 KCNH8Q96L42 1107 aa11.02□□□□□ -0.65
GPM6B-205ENST00000454189 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
GPM6B-205ENST00000454189 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
GPM6B-205ENST00000454189 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
GPM6B-205ENST00000454189 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
GPM6B-205ENST00000454189 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
GPM6B-205ENST00000454189 CARMIL2Q6F5E8 1435 aa10.97□□□□□ -0.65
GPM6B-205ENST00000454189 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.65
GPM6B-205ENST00000454189 LRRC9Q6ZRR7 1453 aa10.97□□□□□ -0.65
GPM6B-205ENST00000454189 BIVM-ERCC5R4GMW8 1640 aa10.97□□□□□ -0.65
GPM6B-205ENST00000454189 NPM1P06748 294 aaKnown RBP eCLIP10.97□□□□□ -0.65
GPM6B-205ENST00000454189 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.65
GPM6B-205ENST00000454189 JPH4Q96JJ6 628 aa10.96□□□□□ -0.65
GPM6B-205ENST00000454189 RRBP1Q9P2E9 1410 aaKnown RBP10.95□□□□□ -0.66
GPM6B-205ENST00000454189 FAM9BQ8IZU0 186 aa10.94□□□□□ -0.66
GPM6B-205ENST00000454189 PPP1R15AO75807 674 aaPredicted RBP10.94□□□□□ -0.66
GPM6B-205ENST00000454189 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
GPM6B-205ENST00000454189 FKBP8Q14318 412 aa10.93□□□□□ -0.66
GPM6B-205ENST00000454189 FOXD1Q16676 465 aa10.93□□□□□ -0.66
GPM6B-205ENST00000454189 ABCA10Q8WWZ4 1543 aa10.93□□□□□ -0.66
GPM6B-205ENST00000454189 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
GPM6B-205ENST00000454189 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
GPM6B-205ENST00000454189 MRS2Q9HD23 443 aa10.91□□□□□ -0.66
GPM6B-205ENST00000454189 RGL3Q3MIN7 710 aa10.91□□□□□ -0.66
GPM6B-205ENST00000454189 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
GPM6B-205ENST00000454189 LAMC3Q9Y6N6 1575 aa10.9□□□□□ -0.67
GPM6B-205ENST00000454189 FYCO1Q9BQS8 1478 aa10.89□□□□□ -0.67
GPM6B-205ENST00000454189 GRIN2BQ13224 1484 aa10.89□□□□□ -0.67
GPM6B-205ENST00000454189 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
GPM6B-205ENST00000454189 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
GPM6B-205ENST00000454189 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
GPM6B-205ENST00000454189 MYOM3Q5VTT5 1437 aa10.87□□□□□ -0.67
GPM6B-205ENST00000454189 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
GPM6B-205ENST00000454189 PKD2Q13563 968 aa10.86□□□□□ -0.67
GPM6B-205ENST00000454189 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
GPM6B-205ENST00000454189 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
GPM6B-205ENST00000454189 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
GPM6B-205ENST00000454189 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
GPM6B-205ENST00000454189 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
GPM6B-205ENST00000454189 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
GPM6B-205ENST00000454189 ANKRD30AQ9BXX3 1397 aa10.83□□□□□ -0.68
GPM6B-205ENST00000454189 HNRNPMP52272 730 aaKnown RBP eCLIP10.82□□□□□ -0.68
GPM6B-205ENST00000454189 NUP155O75694 1391 aa10.82□□□□□ -0.68
GPM6B-205ENST00000454189 ZNF644Q9H582 1327 aaPredicted RBP10.82□□□□□ -0.68
GPM6B-205ENST00000454189 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
GPM6B-205ENST00000454189 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
GPM6B-205ENST00000454189 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
GPM6B-205ENST00000454189 PTPRGP23470 1445 aa10.8□□□□□ -0.68
GPM6B-205ENST00000454189 CCER2I3L3R5 266 aa10.8□□□□□ -0.68
GPM6B-205ENST00000454189 CUL7Q14999 1698 aa10.8□□□□□ -0.68
GPM6B-205ENST00000454189 UACAQ9BZF9 1416 aa10.79□□□□□ -0.68
GPM6B-205ENST00000454189 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
GPM6B-205ENST00000454189 MAP3K1Q13233 1512 aa10.78□□□□□ -0.68
GPM6B-205ENST00000454189 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
GPM6B-205ENST00000454189 PRDM2Q13029 1718 aa10.77□□□□□ -0.69
GPM6B-205ENST00000454189 IRX6P78412 446 aaPredicted RBP10.76□□□□□ -0.69
GPM6B-205ENST00000454189 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
GPM6B-205ENST00000454189 RSPH4AQ5TD94 716 aa10.75□□□□□ -0.69
GPM6B-205ENST00000454189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.74□□□□□ -0.69
GPM6B-205ENST00000454189 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
GPM6B-205ENST00000454189 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
GPM6B-205ENST00000454189 SENP3-EIF4A1A0A087X0R7 540 aa10.73□□□□□ -0.69
GPM6B-205ENST00000454189 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms