RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
TRA2B-205ENST00000453386 TIAM1Q13009 1591 aa22.48■■□□□ 1.19
TRA2B-205ENST00000453386 PHLDB1Q86UU1 1377 aa22.47■■□□□ 1.19
TRA2B-205ENST00000453386 LRRC9Q6ZRR7 1453 aa22.45■■□□□ 1.19
TRA2B-205ENST00000453386 TSHZ2Q9NRE2 1034 aa22.43■■□□□ 1.18
TRA2B-205ENST00000453386 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
TRA2B-205ENST00000453386 BCANQ96GW7 911 aa22.39■■□□□ 1.18
TRA2B-205ENST00000453386 HIRIP3Q9BW71 556 aaPredicted RBP22.38■■□□□ 1.17
TRA2B-205ENST00000453386 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
TRA2B-205ENST00000453386 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
TRA2B-205ENST00000453386 FGD5Q6ZNL6 1462 aa22.37■■□□□ 1.17
TRA2B-205ENST00000453386 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
TRA2B-205ENST00000453386 FKBP8Q14318 412 aa22.33■■□□□ 1.16
TRA2B-205ENST00000453386 PPP1R15AO75807 674 aaPredicted RBP22.31■■□□□ 1.16
TRA2B-205ENST00000453386 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
TRA2B-205ENST00000453386 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
TRA2B-205ENST00000453386 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
TRA2B-205ENST00000453386 ANP32CO43423 234 aa22.25■■□□□ 1.15
TRA2B-205ENST00000453386 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
TRA2B-205ENST00000453386 PRDM2Q13029 1718 aa22.24■■□□□ 1.15
TRA2B-205ENST00000453386 NEFLP07196 543 aa22.22■■□□□ 1.15
TRA2B-205ENST00000453386 CFAP43Q8NDM7 1665 aa22.2■■□□□ 1.14
TRA2B-205ENST00000453386 CCER2I3L3R5 266 aa22.18■■□□□ 1.14
TRA2B-205ENST00000453386 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
TRA2B-205ENST00000453386 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
TRA2B-205ENST00000453386 FYCO1Q9BQS8 1478 aa22.16■■□□□ 1.14
TRA2B-205ENST00000453386 CASKIN1Q8WXD9 1431 aa22.15■■□□□ 1.14
TRA2B-205ENST00000453386 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
TRA2B-205ENST00000453386 ANP32EQ9BTT0 268 aa22.14■■□□□ 1.13
TRA2B-205ENST00000453386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.13■■□□□ 1.135e-7■□□□□ 8.4
TRA2B-205ENST00000453386 MTUS2Q5JR59 1369 aa22.11■■□□□ 1.13
TRA2B-205ENST00000453386 FGD6Q6ZV73 1430 aa22.11■■□□□ 1.13
TRA2B-205ENST00000453386 EFCAB5A4FU69 1503 aa22.08■■□□□ 1.13
TRA2B-205ENST00000453386 CCDC18Q5T9S5 1454 aa22.07■■□□□ 1.12
TRA2B-205ENST00000453386 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.122e-7■■■■□ 20.5
TRA2B-205ENST00000453386 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
TRA2B-205ENST00000453386 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
TRA2B-205ENST00000453386 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
TRA2B-205ENST00000453386 PTPRKQ15262 1439 aa22.03■■□□□ 1.12
TRA2B-205ENST00000453386 UACAQ9BZF9 1416 aa22.02■■□□□ 1.12
TRA2B-205ENST00000453386 HFM1A2PYH4 1435 aa22.01■■□□□ 1.11
TRA2B-205ENST00000453386 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
TRA2B-205ENST00000453386 TOPBP1Q92547 1522 aa22■■□□□ 1.11
TRA2B-205ENST00000453386 RBM19Q9Y4C8 960 aaKnown RBP21.99■■□□□ 1.11
TRA2B-205ENST00000453386 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
TRA2B-205ENST00000453386 HNRNPUQ00839 825 aaKnown RBP eCLIP21.96■■□□□ 1.11
TRA2B-205ENST00000453386 NAIPQ13075 1403 aa21.95■■□□□ 1.1
TRA2B-205ENST00000453386 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
TRA2B-205ENST00000453386 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
TRA2B-205ENST00000453386 CUL7Q14999 1698 aa21.94■■□□□ 1.1
TRA2B-205ENST00000453386 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
TRA2B-205ENST00000453386 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
TRA2B-205ENST00000453386 NCOA2Q15596 1464 aa21.93■■□□□ 1.1
TRA2B-205ENST00000453386 NESP48681 1621 aa21.93■■□□□ 1.1
TRA2B-205ENST00000453386 MYOM3Q5VTT5 1437 aa21.92■■□□□ 1.1
TRA2B-205ENST00000453386 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
TRA2B-205ENST00000453386 CTTNBP2Q8WZ74 1663 aa21.92■■□□□ 1.1
TRA2B-205ENST00000453386 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
TRA2B-205ENST00000453386 IRX6P78412 446 aaPredicted RBP21.87■■□□□ 1.09
TRA2B-205ENST00000453386 WASHC2AQ641Q2 1341 aa21.84■■□□□ 1.09
TRA2B-205ENST00000453386 GRIN2BQ13224 1484 aa21.83■■□□□ 1.08
TRA2B-205ENST00000453386 EIF4G2P78344 907 aaKnown RBP eCLIP21.81■■□□□ 1.08
TRA2B-205ENST00000453386 KDM5BQ9UGL1 1544 aa21.79■■□□□ 1.08
TRA2B-205ENST00000453386 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
TRA2B-205ENST00000453386 SAMD9Q5K651 1589 aa21.78■■□□□ 1.08
TRA2B-205ENST00000453386 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
TRA2B-205ENST00000453386 EHBP1L1Q8N3D4 1523 aa21.78■■□□□ 1.08
TRA2B-205ENST00000453386 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
TRA2B-205ENST00000453386 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
TRA2B-205ENST00000453386 ARID3CA6NKF2 412 aa21.76■■□□□ 1.07
TRA2B-205ENST00000453386 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
TRA2B-205ENST00000453386 FOXD1Q16676 465 aa21.75■■□□□ 1.07
TRA2B-205ENST00000453386 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
TRA2B-205ENST00000453386 L3MBTL2Q969R5 705 aa21.74■■□□□ 1.07
TRA2B-205ENST00000453386 UGGT2Q9NYU1 1516 aa21.74■■□□□ 1.07
TRA2B-205ENST00000453386 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
TRA2B-205ENST00000453386 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
TRA2B-205ENST00000453386 MAGI3Q5TCQ9 1506 aa21.71■■□□□ 1.07
TRA2B-205ENST00000453386 FAM9BQ8IZU0 186 aa21.71■■□□□ 1.07
TRA2B-205ENST00000453386 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
TRA2B-205ENST00000453386 C11orf95C9JLR9 678 aaPredicted RBP21.69■■□□□ 1.06
TRA2B-205ENST00000453386 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
TRA2B-205ENST00000453386 MSH5O43196 834 aa21.67■■□□□ 1.06
TRA2B-205ENST00000453386 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
TRA2B-205ENST00000453386 ARHGEF11O15085 1522 aa21.67■■□□□ 1.06
TRA2B-205ENST00000453386 MRS2Q9HD23 443 aa21.66■■□□□ 1.06
TRA2B-205ENST00000453386 PRKRIP1Q9H875 184 aaPredicted RBP21.66■■□□□ 1.06
TRA2B-205ENST00000453386 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
TRA2B-205ENST00000453386 KDM6BO15054 1643 aa21.64■■□□□ 1.05
TRA2B-205ENST00000453386 CCDC7Q96M83 1385 aa21.63■■□□□ 1.05
TRA2B-205ENST00000453386 PPP4R2Q9NY27 417 aa21.62■■□□□ 1.05
TRA2B-205ENST00000453386 HECW1Q76N89 1606 aa21.61■■□□□ 1.05
TRA2B-205ENST00000453386 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
TRA2B-205ENST00000453386 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
TRA2B-205ENST00000453386 ERICH6BQ5W0A0 696 aa21.6■■□□□ 1.05
TRA2B-205ENST00000453386 AKNAQ7Z591 1439 aa21.6■■□□□ 1.05
TRA2B-205ENST00000453386 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
TRA2B-205ENST00000453386 GCC2Q8IWJ2 1684 aa21.59■■□□□ 1.05
TRA2B-205ENST00000453386 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
TRA2B-205ENST00000453386 FANCIQ9NVI1 1328 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms