RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
THUMPD3-206ENST00000452837 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
THUMPD3-206ENST00000452837 WDR97A6NE52 1622 aa18.08■□□□□ 0.49
THUMPD3-206ENST00000452837 FGD5Q6ZNL6 1462 aa18.08■□□□□ 0.49
THUMPD3-206ENST00000452837 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
THUMPD3-206ENST00000452837 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
THUMPD3-206ENST00000452837 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
THUMPD3-206ENST00000452837 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
THUMPD3-206ENST00000452837 TSHZ2Q9NRE2 1034 aa18.05■□□□□ 0.48
THUMPD3-206ENST00000452837 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
THUMPD3-206ENST00000452837 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
THUMPD3-206ENST00000452837 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
THUMPD3-206ENST00000452837 BCANQ96GW7 911 aa18■□□□□ 0.47
THUMPD3-206ENST00000452837 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
THUMPD3-206ENST00000452837 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
THUMPD3-206ENST00000452837 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
THUMPD3-206ENST00000452837 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
THUMPD3-206ENST00000452837 CFAP43Q8NDM7 1665 aa17.95■□□□□ 0.46
THUMPD3-206ENST00000452837 FKBP8Q14318 412 aa17.91■□□□□ 0.46
THUMPD3-206ENST00000452837 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
THUMPD3-206ENST00000452837 TRIM52Q96A61 297 aa17.87■□□□□ 0.45
THUMPD3-206ENST00000452837 PTPRKQ15262 1439 aa17.86■□□□□ 0.45
THUMPD3-206ENST00000452837 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
THUMPD3-206ENST00000452837 FYCO1Q9BQS8 1478 aa17.85■□□□□ 0.45
THUMPD3-206ENST00000452837 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
THUMPD3-206ENST00000452837 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
THUMPD3-206ENST00000452837 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
THUMPD3-206ENST00000452837 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
THUMPD3-206ENST00000452837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.8■□□□□ 0.44
THUMPD3-206ENST00000452837 NESP48681 1621 aa17.79■□□□□ 0.44
THUMPD3-206ENST00000452837 ANP32CO43423 234 aa17.79■□□□□ 0.44
THUMPD3-206ENST00000452837 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
THUMPD3-206ENST00000452837 AQRO60306 1485 aaKnown RBP eCLIP17.78■□□□□ 0.448e-7■■■□□ 16.1
THUMPD3-206ENST00000452837 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
THUMPD3-206ENST00000452837 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
THUMPD3-206ENST00000452837 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
THUMPD3-206ENST00000452837 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
THUMPD3-206ENST00000452837 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
THUMPD3-206ENST00000452837 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.44
THUMPD3-206ENST00000452837 TONSLQ96HA7 1378 aa17.77■□□□□ 0.44
THUMPD3-206ENST00000452837 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
THUMPD3-206ENST00000452837 HFM1A2PYH4 1435 aa17.73■□□□□ 0.43
THUMPD3-206ENST00000452837 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
THUMPD3-206ENST00000452837 ANP32EQ9BTT0 268 aa17.72■□□□□ 0.43
THUMPD3-206ENST00000452837 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
THUMPD3-206ENST00000452837 NAIPQ13075 1403 aa17.72■□□□□ 0.43
THUMPD3-206ENST00000452837 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
THUMPD3-206ENST00000452837 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.43
THUMPD3-206ENST00000452837 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
THUMPD3-206ENST00000452837 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
THUMPD3-206ENST00000452837 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
THUMPD3-206ENST00000452837 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
THUMPD3-206ENST00000452837 CUL7Q14999 1698 aa17.69■□□□□ 0.42
THUMPD3-206ENST00000452837 NEFLP07196 543 aa17.68■□□□□ 0.42
THUMPD3-206ENST00000452837 RRP7BPQ9NSQ0 103 aa17.66■□□□□ 0.42
THUMPD3-206ENST00000452837 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
THUMPD3-206ENST00000452837 RBM19Q9Y4C8 960 aaKnown RBP17.66■□□□□ 0.42
THUMPD3-206ENST00000452837 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
THUMPD3-206ENST00000452837 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
THUMPD3-206ENST00000452837 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
THUMPD3-206ENST00000452837 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
THUMPD3-206ENST00000452837 MAGI3Q5TCQ9 1506 aa17.63■□□□□ 0.41
THUMPD3-206ENST00000452837 DENND4BO75064 1496 aaPredicted RBP17.62■□□□□ 0.41
THUMPD3-206ENST00000452837 WASHC2AQ641Q2 1341 aa17.62■□□□□ 0.41
THUMPD3-206ENST00000452837 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
THUMPD3-206ENST00000452837 HSPA5P11021 654 aaKnown RBP17.6■□□□□ 0.41
THUMPD3-206ENST00000452837 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
THUMPD3-206ENST00000452837 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
THUMPD3-206ENST00000452837 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
THUMPD3-206ENST00000452837 FOXD1Q16676 465 aa17.57■□□□□ 0.4
THUMPD3-206ENST00000452837 KDM6BO15054 1643 aa17.57■□□□□ 0.4
THUMPD3-206ENST00000452837 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
THUMPD3-206ENST00000452837 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
THUMPD3-206ENST00000452837 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
THUMPD3-206ENST00000452837 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
THUMPD3-206ENST00000452837 SUPT6HQ7KZ85 1726 aaKnown RBP17.56■□□□□ 0.4
THUMPD3-206ENST00000452837 EHBP1L1Q8N3D4 1523 aa17.55■□□□□ 0.4
THUMPD3-206ENST00000452837 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
THUMPD3-206ENST00000452837 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
THUMPD3-206ENST00000452837 MSH5O43196 834 aa17.5■□□□□ 0.39
THUMPD3-206ENST00000452837 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
THUMPD3-206ENST00000452837 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
THUMPD3-206ENST00000452837 MPHOSPH9Q99550 1183 aa17.49■□□□□ 0.39
THUMPD3-206ENST00000452837 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
THUMPD3-206ENST00000452837 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
THUMPD3-206ENST00000452837 EIF4G2P78344 907 aaKnown RBP eCLIP17.47■□□□□ 0.39
THUMPD3-206ENST00000452837 CDK13Q14004 1512 aaKnown RBP17.47■□□□□ 0.39
THUMPD3-206ENST00000452837 NBPF8Q3BBV2 869 aa17.45■□□□□ 0.38
THUMPD3-206ENST00000452837 HECW1Q76N89 1606 aa17.44■□□□□ 0.38
THUMPD3-206ENST00000452837 GCC2Q8IWJ2 1684 aa17.44■□□□□ 0.38
THUMPD3-206ENST00000452837 CNTLNQ9NXG0 1405 aa17.44■□□□□ 0.38
THUMPD3-206ENST00000452837 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
THUMPD3-206ENST00000452837 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
THUMPD3-206ENST00000452837 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
THUMPD3-206ENST00000452837 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
THUMPD3-206ENST00000452837 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
THUMPD3-206ENST00000452837 ZNF644Q9H582 1327 aaPredicted RBP17.39■□□□□ 0.38
THUMPD3-206ENST00000452837 AKNAQ7Z591 1439 aa17.39■□□□□ 0.37
THUMPD3-206ENST00000452837 BCL11AQ9H165 835 aa17.39■□□□□ 0.37
THUMPD3-206ENST00000452837 TARBP1Q13395 1621 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms