RNA–Protein interactions for RNA: ENST00000449294.6

CHL1-207, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-207ENST00000449294 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
CHL1-207ENST00000449294 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
CHL1-207ENST00000449294 CFTRP13569 1480 aa16.54■□□□□ 0.24
CHL1-207ENST00000449294 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
CHL1-207ENST00000449294 FXR2P51116 673 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHL1-207ENST00000449294 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
CHL1-207ENST00000449294 HAX1O00165 279 aa16.4■□□□□ 0.22
CHL1-207ENST00000449294 RIMBP3CA6NJZ7 1639 aa16.38■□□□□ 0.21
CHL1-207ENST00000449294 RIMBP3BA6NNM3 1639 aa16.38■□□□□ 0.21
CHL1-207ENST00000449294 RIMBP3Q9UFD9 1639 aa16.38■□□□□ 0.21
CHL1-207ENST00000449294 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
CHL1-207ENST00000449294 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
CHL1-207ENST00000449294 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
CHL1-207ENST00000449294 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
CHL1-207ENST00000449294 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
CHL1-207ENST00000449294 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
CHL1-207ENST00000449294 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
CHL1-207ENST00000449294 FBLN2P98095 1184 aa16.26■□□□□ 0.19
CHL1-207ENST00000449294 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
CHL1-207ENST00000449294 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
CHL1-207ENST00000449294 EVX2Q03828 476 aa16.21■□□□□ 0.19
CHL1-207ENST00000449294 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
CHL1-207ENST00000449294 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
CHL1-207ENST00000449294 CHD1O14646 1710 aa16.16■□□□□ 0.18
CHL1-207ENST00000449294 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
CHL1-207ENST00000449294 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
CHL1-207ENST00000449294 MKRN4PQ13434 485 aaPredicted RBP16.14■□□□□ 0.17
CHL1-207ENST00000449294 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
CHL1-207ENST00000449294 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
CHL1-207ENST00000449294 SPDYE1Q8NFV5 336 aaPredicted RBP16.11■□□□□ 0.17
CHL1-207ENST00000449294 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
CHL1-207ENST00000449294 CUX1P39880 1505 aa16.09■□□□□ 0.17
CHL1-207ENST00000449294 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
CHL1-207ENST00000449294 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
CHL1-207ENST00000449294 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
CHL1-207ENST00000449294 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
CHL1-207ENST00000449294 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
CHL1-207ENST00000449294 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
CHL1-207ENST00000449294 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
CHL1-207ENST00000449294 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
CHL1-207ENST00000449294 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
CHL1-207ENST00000449294 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
CHL1-207ENST00000449294 BIVM-ERCC5R4GMW8 1640 aa15.99■□□□□ 0.15
CHL1-207ENST00000449294 SOGA1O94964 1423 aa15.99■□□□□ 0.15
CHL1-207ENST00000449294 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
CHL1-207ENST00000449294 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
CHL1-207ENST00000449294 C19orf67A6NJJ6 358 aa15.97■□□□□ 0.15
CHL1-207ENST00000449294 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
CHL1-207ENST00000449294 WDR97A6NE52 1622 aa15.88■□□□□ 0.13
CHL1-207ENST00000449294 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
CHL1-207ENST00000449294 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
CHL1-207ENST00000449294 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
CHL1-207ENST00000449294 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
CHL1-207ENST00000449294 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
CHL1-207ENST00000449294 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
CHL1-207ENST00000449294 GABBR2O75899 941 aa15.81■□□□□ 0.12
CHL1-207ENST00000449294 GAPVD1Q14C86 1478 aa15.81■□□□□ 0.12
CHL1-207ENST00000449294 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
CHL1-207ENST00000449294 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
CHL1-207ENST00000449294 PRR29P0C7W0 189 aa15.76■□□□□ 0.11
CHL1-207ENST00000449294 KIF27Q86VH2 1401 aa15.76■□□□□ 0.11
CHL1-207ENST00000449294 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
CHL1-207ENST00000449294 ADAMTS12P58397 1594 aa15.69■□□□□ 0.1
CHL1-207ENST00000449294 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
CHL1-207ENST00000449294 GRIN2AQ12879 1464 aa15.67■□□□□ 0.1
CHL1-207ENST00000449294 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
CHL1-207ENST00000449294 LHX8Q68G74 356 aa15.63■□□□□ 0.09
CHL1-207ENST00000449294 IGF1RP08069 1367 aa15.62■□□□□ 0.09
CHL1-207ENST00000449294 NUP160Q12769 1436 aa15.62■□□□□ 0.09
CHL1-207ENST00000449294 CUL7Q14999 1698 aa15.6■□□□□ 0.09
CHL1-207ENST00000449294 RUSC2Q8N2Y8 1516 aa15.59■□□□□ 0.09
CHL1-207ENST00000449294 SHROOM2Q13796 1616 aa15.59■□□□□ 0.09
CHL1-207ENST00000449294 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
CHL1-207ENST00000449294 EEA1Q15075 1411 aa15.57■□□□□ 0.08
CHL1-207ENST00000449294 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
CHL1-207ENST00000449294 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
CHL1-207ENST00000449294 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.08
CHL1-207ENST00000449294 POTEIP0CG38 1075 aa15.5■□□□□ 0.07
CHL1-207ENST00000449294 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
CHL1-207ENST00000449294 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
CHL1-207ENST00000449294 PRG4Q92954 1404 aaPredicted RBP15.48■□□□□ 0.07
CHL1-207ENST00000449294 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
CHL1-207ENST00000449294 CLCN6P51797 869 aa15.41■□□□□ 0.06
CHL1-207ENST00000449294 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
CHL1-207ENST00000449294 ADCY10Q96PN6 1610 aa15.4■□□□□ 0.06
CHL1-207ENST00000449294 KIAA0586Q9BVV6 1533 aa15.4■□□□□ 0.06
CHL1-207ENST00000449294 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
CHL1-207ENST00000449294 FKBP8Q14318 412 aa15.37■□□□□ 0.05
CHL1-207ENST00000449294 JPH4Q96JJ6 628 aa15.37■□□□□ 0.05
CHL1-207ENST00000449294 MAPKBP1O60336 1514 aa15.37■□□□□ 0.05
CHL1-207ENST00000449294 FAM69CQ0P6D2 419 aa15.36■□□□□ 0.05
CHL1-207ENST00000449294 KIF21BO75037 1637 aa15.35■□□□□ 0.05
CHL1-207ENST00000449294 IQGAP2Q13576 1575 aa15.33■□□□□ 0.05
CHL1-207ENST00000449294 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
CHL1-207ENST00000449294 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
CHL1-207ENST00000449294 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
CHL1-207ENST00000449294 KDM6BO15054 1643 aa15.31■□□□□ 0.04
CHL1-207ENST00000449294 CTTNBP2Q8WZ74 1663 aa15.29■□□□□ 0.04
CHL1-207ENST00000449294 KDM4FA0A1W2PPD8 638 aa15.28■□□□□ 0.04
CHL1-207ENST00000449294 DCBLD2Q96PD2 775 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms