RNA–Protein interactions for RNA: ENST00000449294.6

CHL1-207, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-207ENST00000449294 AEBP2Q6ZN18 517 aaPredicted RBP30.54■■■□□ 2.48
CHL1-207ENST00000449294 CHIC1Q5VXU3 224 aa28.6■■■□□ 2.17
CHL1-207ENST00000449294 SENP3Q9H4L4 574 aaPredicted RBP26.09■■□□□ 1.77
CHL1-207ENST00000449294 PHF23Q9BUL5 403 aaPredicted RBP25.68■■□□□ 1.7
CHL1-207ENST00000449294 FOXD1Q16676 465 aa24.37■■□□□ 1.49
CHL1-207ENST00000449294 POTEDQ86YR6 584 aa23.06■■□□□ 1.28
CHL1-207ENST00000449294 MSH5O43196 834 aa22.95■■□□□ 1.26
CHL1-207ENST00000449294 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
CHL1-207ENST00000449294 PIAS4Q8N2W9 510 aaPredicted RBP22.67■■□□□ 1.22
CHL1-207ENST00000449294 PPP6R1Q9UPN7 881 aa22.49■■□□□ 1.19
CHL1-207ENST00000449294 ADRA2BP18089 450 aa22.38■■□□□ 1.17
CHL1-207ENST00000449294 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
CHL1-207ENST00000449294 MAPK8IP2Q13387 824 aaPredicted RBP20.67■□□□□ 0.9
CHL1-207ENST00000449294 DMRT2Q9Y5R5 561 aa20.64■□□□□ 0.89
CHL1-207ENST00000449294 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
CHL1-207ENST00000449294 ABCC9O60706 1549 aa20.08■□□□□ 0.81
CHL1-207ENST00000449294 CACNB1Q02641 598 aaPredicted RBP19.9■□□□□ 0.78
CHL1-207ENST00000449294 PPP4R3CPQ6ZMV5 832 aa19.81■□□□□ 0.76
CHL1-207ENST00000449294 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
CHL1-207ENST00000449294 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
CHL1-207ENST00000449294 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
CHL1-207ENST00000449294 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
CHL1-207ENST00000449294 CNKSR2Q8WXI2 1034 aa19.53■□□□□ 0.72
CHL1-207ENST00000449294 RNF216Q9NWF9 866 aaPredicted RBP19.47■□□□□ 0.71
CHL1-207ENST00000449294 C1QBPQ07021 282 aaKnown RBP19.23■□□□□ 0.67
CHL1-207ENST00000449294 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
CHL1-207ENST00000449294 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
CHL1-207ENST00000449294 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
CHL1-207ENST00000449294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHL1-207ENST00000449294 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
CHL1-207ENST00000449294 NACADO15069 1562 aa18.68■□□□□ 0.58
CHL1-207ENST00000449294 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHL1-207ENST00000449294 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
CHL1-207ENST00000449294 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
CHL1-207ENST00000449294 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
CHL1-207ENST00000449294 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
CHL1-207ENST00000449294 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
CHL1-207ENST00000449294 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
CHL1-207ENST00000449294 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
CHL1-207ENST00000449294 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
CHL1-207ENST00000449294 DSG3P32926 999 aa18.18■□□□□ 0.5
CHL1-207ENST00000449294 CAPN15O75808 1086 aa18.17■□□□□ 0.5
CHL1-207ENST00000449294 KCNA4P22459 653 aa18.15■□□□□ 0.5
CHL1-207ENST00000449294 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
CHL1-207ENST00000449294 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
CHL1-207ENST00000449294 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
CHL1-207ENST00000449294 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
CHL1-207ENST00000449294 POTEHQ6S545 545 aa17.99■□□□□ 0.47
CHL1-207ENST00000449294 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
CHL1-207ENST00000449294 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
CHL1-207ENST00000449294 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
CHL1-207ENST00000449294 APLP2Q06481 763 aa17.77■□□□□ 0.44
CHL1-207ENST00000449294 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
CHL1-207ENST00000449294 ABCB7O75027 752 aa17.73■□□□□ 0.43
CHL1-207ENST00000449294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
CHL1-207ENST00000449294 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
CHL1-207ENST00000449294 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
CHL1-207ENST00000449294 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
CHL1-207ENST00000449294 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
CHL1-207ENST00000449294 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
CHL1-207ENST00000449294 RBM42Q9BTD8 480 aaKnown RBP17.34■□□□□ 0.37
CHL1-207ENST00000449294 CUX2O14529 1486 aa17.32■□□□□ 0.36
CHL1-207ENST00000449294 ERCC6Q03468 1493 aa17.3■□□□□ 0.36
CHL1-207ENST00000449294 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
CHL1-207ENST00000449294 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
CHL1-207ENST00000449294 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
CHL1-207ENST00000449294 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
CHL1-207ENST00000449294 POLA2Q14181 598 aa17.22■□□□□ 0.35
CHL1-207ENST00000449294 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
CHL1-207ENST00000449294 NESP48681 1621 aa17.21■□□□□ 0.35
CHL1-207ENST00000449294 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
CHL1-207ENST00000449294 HMGXB3Q12766 1538 aa17.14■□□□□ 0.33
CHL1-207ENST00000449294 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
CHL1-207ENST00000449294 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
CHL1-207ENST00000449294 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
CHL1-207ENST00000449294 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
CHL1-207ENST00000449294 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
CHL1-207ENST00000449294 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
CHL1-207ENST00000449294 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
CHL1-207ENST00000449294 WIZO95785 1651 aa16.97■□□□□ 0.31
CHL1-207ENST00000449294 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
CHL1-207ENST00000449294 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
CHL1-207ENST00000449294 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
CHL1-207ENST00000449294 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
CHL1-207ENST00000449294 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
CHL1-207ENST00000449294 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
CHL1-207ENST00000449294 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
CHL1-207ENST00000449294 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
CHL1-207ENST00000449294 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
CHL1-207ENST00000449294 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
CHL1-207ENST00000449294 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
CHL1-207ENST00000449294 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
CHL1-207ENST00000449294 WDR62O43379 1518 aa16.73■□□□□ 0.27
CHL1-207ENST00000449294 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
CHL1-207ENST00000449294 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
CHL1-207ENST00000449294 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
CHL1-207ENST00000449294 ZBTB22O15209 634 aa16.66■□□□□ 0.26
CHL1-207ENST00000449294 PIP4P2Q8N4L2 257 aa16.64■□□□□ 0.25
CHL1-207ENST00000449294 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
CHL1-207ENST00000449294 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms