RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
RFC4-209ENST00000448497 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
RFC4-209ENST00000448497 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
RFC4-209ENST00000448497 TNIKQ9UKE5 1360 aa11.11□□□□□ -0.63
RFC4-209ENST00000448497 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
RFC4-209ENST00000448497 TOPBP1Q92547 1522 aa11.1□□□□□ -0.63
RFC4-209ENST00000448497 FGD5Q6ZNL6 1462 aa11.1□□□□□ -0.63
RFC4-209ENST00000448497 KIF21AQ7Z4S6 1674 aa11.1□□□□□ -0.63
RFC4-209ENST00000448497 KIF27Q86VH2 1401 aa11.09□□□□□ -0.63
RFC4-209ENST00000448497 FBLN2P98095 1184 aa11.08□□□□□ -0.64
RFC4-209ENST00000448497 PRXQ9BXM0 1461 aa11.07□□□□□ -0.64
RFC4-209ENST00000448497 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
RFC4-209ENST00000448497 URB2Q14146 1524 aaKnown RBP11.06□□□□□ -0.64
RFC4-209ENST00000448497 ABCA10Q8WWZ4 1543 aa11.05□□□□□ -0.64
RFC4-209ENST00000448497 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
RFC4-209ENST00000448497 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
RFC4-209ENST00000448497 CUX2O14529 1486 aa11.01□□□□□ -0.65
RFC4-209ENST00000448497 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
RFC4-209ENST00000448497 MRC2Q9UBG0 1479 aa11□□□□□ -0.65
RFC4-209ENST00000448497 CUL7Q14999 1698 aa10.98□□□□□ -0.65
RFC4-209ENST00000448497 IGF1RP08069 1367 aa10.98□□□□□ -0.65
RFC4-209ENST00000448497 TARBP1Q13395 1621 aaKnown RBP10.98□□□□□ -0.65
RFC4-209ENST00000448497 ABCA5Q8WWZ7 1642 aa10.98□□□□□ -0.65
RFC4-209ENST00000448497 WDR62O43379 1518 aa10.97□□□□□ -0.65
RFC4-209ENST00000448497 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
RFC4-209ENST00000448497 RAD54L2Q9Y4B4 1467 aa10.95□□□□□ -0.66
RFC4-209ENST00000448497 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
RFC4-209ENST00000448497 CLIP1P30622 1438 aa10.92□□□□□ -0.66
RFC4-209ENST00000448497 CARMIL1Q5VZK9 1371 aa10.91□□□□□ -0.66
RFC4-209ENST00000448497 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
RFC4-209ENST00000448497 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
RFC4-209ENST00000448497 IFT140Q96RY7 1462 aa10.88□□□□□ -0.67
RFC4-209ENST00000448497 PBRM1Q86U86 1689 aa10.88□□□□□ -0.67
RFC4-209ENST00000448497 TRIM26Q12899 539 aaPredicted RBP10.87□□□□□ -0.67
RFC4-209ENST00000448497 FKBP8Q14318 412 aa10.87□□□□□ -0.67
RFC4-209ENST00000448497 CTTNBP2Q8WZ74 1663 aa10.86□□□□□ -0.67
RFC4-209ENST00000448497 VPS8Q8N3P4 1428 aa10.86□□□□□ -0.67
RFC4-209ENST00000448497 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
RFC4-209ENST00000448497 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
RFC4-209ENST00000448497 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
RFC4-209ENST00000448497 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
RFC4-209ENST00000448497 SPDYE4A6NLX3 237 aa10.81□□□□□ -0.68
RFC4-209ENST00000448497 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
RFC4-209ENST00000448497 EFCAB5A4FU69 1503 aa10.8□□□□□ -0.68
RFC4-209ENST00000448497 ADAMTS12P58397 1594 aa10.8□□□□□ -0.68
RFC4-209ENST00000448497 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
RFC4-209ENST00000448497 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
RFC4-209ENST00000448497 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
RFC4-209ENST00000448497 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
RFC4-209ENST00000448497 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
RFC4-209ENST00000448497 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
RFC4-209ENST00000448497 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.68
RFC4-209ENST00000448497 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.69
RFC4-209ENST00000448497 MAP3K1Q13233 1512 aa10.75□□□□□ -0.69
RFC4-209ENST00000448497 ZNF608Q9ULD9 1512 aaPredicted RBP10.75□□□□□ -0.69
RFC4-209ENST00000448497 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
RFC4-209ENST00000448497 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
RFC4-209ENST00000448497 SAMD9Q5K651 1589 aa10.74□□□□□ -0.69
RFC4-209ENST00000448497 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
RFC4-209ENST00000448497 IQGAP2Q13576 1575 aa10.69□□□□□ -0.7
RFC4-209ENST00000448497 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
RFC4-209ENST00000448497 SSUH2Q9Y2M2 353 aa10.68□□□□□ -0.7
RFC4-209ENST00000448497 CFAP43Q8NDM7 1665 aa10.68□□□□□ -0.7
RFC4-209ENST00000448497 SYNJ2O15056 1496 aa10.68□□□□□ -0.7
RFC4-209ENST00000448497 PROM2Q8N271 834 aa10.67□□□□□ -0.7
RFC4-209ENST00000448497 UGGT2Q9NYU1 1516 aa10.67□□□□□ -0.7
RFC4-209ENST00000448497 GRIN2AQ12879 1464 aa10.67□□□□□ -0.7
RFC4-209ENST00000448497 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
RFC4-209ENST00000448497 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
RFC4-209ENST00000448497 KIAA0586Q9BVV6 1533 aa10.66□□□□□ -0.7
RFC4-209ENST00000448497 TIAM1Q13009 1591 aa10.65□□□□□ -0.7
RFC4-209ENST00000448497 CASKIN1Q8WXD9 1431 aa10.65□□□□□ -0.7
RFC4-209ENST00000448497 PCF11O94913 1555 aaKnown RBP10.65□□□□□ -0.71
RFC4-209ENST00000448497 NUP160Q12769 1436 aa10.62□□□□□ -0.71
RFC4-209ENST00000448497 HRCP23327 699 aa10.62□□□□□ -0.71
RFC4-209ENST00000448497 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
RFC4-209ENST00000448497 FHOD3Q2V2M9 1422 aa10.61□□□□□ -0.71
RFC4-209ENST00000448497 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
RFC4-209ENST00000448497 AKT1S1Q96B36 256 aa10.6□□□□□ -0.71
RFC4-209ENST00000448497 CEP170Q5SW79 1584 aa10.6□□□□□ -0.71
RFC4-209ENST00000448497 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
RFC4-209ENST00000448497 LRRC9Q6ZRR7 1453 aa10.58□□□□□ -0.72
RFC4-209ENST00000448497 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
RFC4-209ENST00000448497 LRRIQ1Q96JM4 1722 aa10.58□□□□□ -0.72
RFC4-209ENST00000448497 RRBP1Q9P2E9 1410 aaKnown RBP10.57□□□□□ -0.72
RFC4-209ENST00000448497 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
RFC4-209ENST00000448497 DISP1Q96F81 1524 aa10.56□□□□□ -0.72
RFC4-209ENST00000448497 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
RFC4-209ENST00000448497 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
RFC4-209ENST00000448497 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
RFC4-209ENST00000448497 CHD1O14646 1710 aa10.55□□□□□ -0.72
RFC4-209ENST00000448497 ZEB1P37275 1124 aaPredicted RBP10.52□□□□□ -0.73
RFC4-209ENST00000448497 P3H3Q8IVL6 736 aa10.52□□□□□ -0.73
RFC4-209ENST00000448497 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
RFC4-209ENST00000448497 EHBP1L1Q8N3D4 1523 aa10.5□□□□□ -0.73
RFC4-209ENST00000448497 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
RFC4-209ENST00000448497 RAPGEF6Q8TEU7 1601 aa10.5□□□□□ -0.73
RFC4-209ENST00000448497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.5□□□□□ -0.73
RFC4-209ENST00000448497 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
RFC4-209ENST00000448497 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms